BLASTX nr result

ID: Glycyrrhiza24_contig00024213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024213
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523230.1| PREDICTED: ornithine decarboxylase [Glycine ...    71   8e-11
ref|XP_003603845.1| Ornithine decarboxylase [Medicago truncatula...    68   9e-10
ref|NP_001236340.1| ornithine decarboxylase [Glycine max] gi|339...    67   1e-09
dbj|BAK32801.1| lysine/ornithine decarboxylase [Echinosophora ko...    64   2e-08
dbj|BAK32797.1| lysine/ornithine decarboxylase [Lupinus angustif...    62   5e-08

>ref|XP_003523230.1| PREDICTED: ornithine decarboxylase [Glycine max]
           gi|33945616|emb|CAD91349.1| ornithine decarboxylase
           [Glycine max]
          Length = 434

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 43/86 (50%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
 Frame = -2

Query: 249 MPTLVSAE---PTTQPINLKSIFGASGVKGKRVTTLSSEKDGLSDFIQSXXXXXXXXXXX 79
           MP+LV+        +P+NLK IF ASG+KGKRVT LS+EK+GL+DFIQ            
Sbjct: 1   MPSLVAEAFQANGAEPLNLKPIFCASGIKGKRVTALSAEKNGLTDFIQ-------RIIAD 53

Query: 78  XXXXXTPFSVLDLGVVTALFENWTTK 1
                TPFSVLDLGVV  L + W  K
Sbjct: 54  KPDIDTPFSVLDLGVVMGLMDQWACK 79


>ref|XP_003603845.1| Ornithine decarboxylase [Medicago truncatula]
           gi|355492893|gb|AES74096.1| Ornithine decarboxylase
           [Medicago truncatula]
          Length = 428

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 43/83 (51%), Positives = 50/83 (60%)
 Frame = -2

Query: 249 MPTLVSAEPTTQPINLKSIFGASGVKGKRVTTLSSEKDGLSDFIQSXXXXXXXXXXXXXX 70
           MPTLV+ E  +Q  NLK IF ASGVKG +VTTLSSE   +SDFIQS              
Sbjct: 1   MPTLVTEESQSQITNLKPIFCASGVKGNKVTTLSSEVT-ISDFIQS------IIKTKPTE 53

Query: 69  XXTPFSVLDLGVVTALFENWTTK 1
             +PFSVLDL V+  L   WTT+
Sbjct: 54  NDSPFSVLDLRVIIDLMNKWTTE 76


>ref|NP_001236340.1| ornithine decarboxylase [Glycine max] gi|33945618|emb|CAD91350.1|
           ornithine decarboxylase [Glycine max]
          Length = 434

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
 Frame = -2

Query: 249 MPTLVSAE---PTTQPINLKSIFGASGVKGKRVTTLSSEKDGLSDFIQSXXXXXXXXXXX 79
           MP+LV+        +P++LK IF ASGVKGKRVT LS+E + L+DFIQ+           
Sbjct: 1   MPSLVAEAFEAKGAEPLSLKPIFSASGVKGKRVTALSAEANALTDFIQA-------IIAD 53

Query: 78  XXXXXTPFSVLDLGVVTALFENWTTK 1
                +PFSVLDLGVV  L + W  K
Sbjct: 54  KPDIDSPFSVLDLGVVMGLMDKWACK 79


>dbj|BAK32801.1| lysine/ornithine decarboxylase [Echinosophora koreensis]
          Length = 455

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 41/85 (48%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
 Frame = -2

Query: 249 MPTLVSAEPTTQ---PINLKSIFGASGVKGKRVTTLSS-EKDGLSDFIQSXXXXXXXXXX 82
           MPTLV+     +   P++LK +F ASGVKGKRVT LS+ E+ G+S FIQS          
Sbjct: 1   MPTLVTEAFQAKGAGPLSLKPLFSASGVKGKRVTALSAKEEGGISSFIQS-------IIH 53

Query: 81  XXXXXXTPFSVLDLGVVTALFENWT 7
                 +PF VLDLGVV  L +NWT
Sbjct: 54  DKPEMDSPFLVLDLGVVMDLMDNWT 78


>dbj|BAK32797.1| lysine/ornithine decarboxylase [Lupinus angustifolius]
          Length = 440

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
 Frame = -2

Query: 240 LVSAEPTTQPINLKSIFGASGVKGKRVTTL--SSEKDGLSDFIQSXXXXXXXXXXXXXXX 67
           L  A+  T P++LK+I+ ASGVKGKRVT L  + ++ G+S FIQS               
Sbjct: 10  LYQAKGATTPLSLKAIYNASGVKGKRVTPLLANEQEGGISHFIQS-------IIRNTPDI 62

Query: 66  XTPFSVLDLGVVTALFENWTT 4
            +PF VLDLGV+  L E WTT
Sbjct: 63  DSPFLVLDLGVIMHLMEKWTT 83


Top