BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024208
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containi...   155   2e-36
emb|CBI30833.3| unnamed protein product [Vitis vinifera]              121   5e-26
ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containi...   121   5e-26
ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
ref|NP_188091.1| pentatricopeptide repeat-containing protein [Ar...    80   2e-13

>ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Glycine max]
          Length = 628

 Score =  155 bits (393), Expect = 2e-36
 Identities = 73/114 (64%), Positives = 91/114 (79%)
 Frame = -1

Query: 343 PKQHNRWLLHFSTSPSSCSSYDVGTCIASLQSCAHNTNLSRGKELHSHMLKNGFFASPLA 164
           P+QH+     FST       YD+GTCIA+LQSCAHN NLS+GKELH+H+LKN FF SPLA
Sbjct: 14  PQQHHHHCRGFST-------YDLGTCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLA 66

Query: 163 ITSLINMYSKCTLMDYALKVFNYPTHRDKNVFAYNSIIAGLVANGLSRDGFGLY 2
           ITSLINMYSKC+L+D++L+VFN+PTH +KNVFAYN++IAG +AN L +    LY
Sbjct: 67  ITSLINMYSKCSLIDHSLRVFNFPTHHNKNVFAYNALIAGFLANALPQRALALY 120


>emb|CBI30833.3| unnamed protein product [Vitis vinifera]
          Length = 709

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/94 (60%), Positives = 75/94 (79%)
 Frame = -1

Query: 283 YDVGTCIASLQSCAHNTNLSRGKELHSHMLKNGFFASPLAITSLINMYSKCTLMDYALKV 104
           Y++ TCIASLQ+ AH+ NLS+GKE+HS+ML NGF  SPL+ITSLINMYSKC  M++AL +
Sbjct: 35  YNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSI 94

Query: 103 FNYPTHRDKNVFAYNSIIAGLVANGLSRDGFGLY 2
           F+ PTH + NVFA+N+II+G + NG   +GF  Y
Sbjct: 95  FSDPTH-EINVFAFNAIISGFITNGFPEEGFEFY 127


>ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Vitis vinifera]
          Length = 629

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/94 (60%), Positives = 75/94 (79%)
 Frame = -1

Query: 283 YDVGTCIASLQSCAHNTNLSRGKELHSHMLKNGFFASPLAITSLINMYSKCTLMDYALKV 104
           Y++ TCIASLQ+ AH+ NLS+GKE+HS+ML NGF  SPL+ITSLINMYSKC  M++AL +
Sbjct: 35  YNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSI 94

Query: 103 FNYPTHRDKNVFAYNSIIAGLVANGLSRDGFGLY 2
           F+ PTH + NVFA+N+II+G + NG   +GF  Y
Sbjct: 95  FSDPTH-EINVFAFNAIISGFITNGFPEEGFEFY 127


>ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Cucumis sativus]
          Length = 603

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/93 (56%), Positives = 68/93 (73%)
 Frame = -1

Query: 280 DVGTCIASLQSCAHNTNLSRGKELHSHMLKNGFFASPLAITSLINMYSKCTLMDYALKVF 101
           +V  C+A LQSCA + NL++GK+LHS M+  GF  SP +ITSLINMYSKC  M  A+ VF
Sbjct: 10  NVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVF 69

Query: 100 NYPTHRDKNVFAYNSIIAGLVANGLSRDGFGLY 2
             P H ++NVFAYN+II+G V+NGL+  GF  Y
Sbjct: 70  YDPCH-ERNVFAYNAIISGFVSNGLASKGFQFY 101


>ref|NP_188091.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274207|sp|Q9LUC2.1|PP231_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g14730 gi|9294394|dbj|BAB02404.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332642039|gb|AEE75560.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 653

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
 Frame = -1

Query: 304 SPSSCSSYDVGTCIASLQSCAHNTNLSRGKELHSHMLKNGFF-ASPLAITSLINMYSKCT 128
           +P     ++V TCIA+LQ CA   +   G+++H  M++ GF   SP A TSL+NMY+KC 
Sbjct: 51  NPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCG 110

Query: 127 LMDYALKVFNYPTHRDKNVFAYNSIIAGLVANGLSRDGFGLY 2
           LM  A+ VF      +++VF YN++I+G V NG   D    Y
Sbjct: 111 LMRRAVLVFG---GSERDVFGYNALISGFVVNGSPLDAMETY 149