BLASTX nr result

ID: Glycyrrhiza24_contig00024203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024203
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531779.1| PREDICTED: protein brittle-1, chloroplastic/...   153   2e-35
ref|NP_001241139.1| uncharacterized protein LOC100795558 [Glycin...   147   7e-34
ref|XP_002311894.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
gb|ABK96044.1| unknown [Populus trichocarpa]                          145   4e-33
ref|XP_002266396.1| PREDICTED: protein brittle-1, chloroplastic/...   142   3e-32

>ref|XP_003531779.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic-like
           [Glycine max]
          Length = 380

 Score =  153 bits (386), Expect = 2e-35
 Identities = 81/109 (74%), Positives = 93/109 (85%), Gaps = 1/109 (0%)
 Frame = +2

Query: 122 FRDVYSIIEDNTEIDQPLPNNSHLRFQMPHLA-RDFLDSREVREFFSGALAGAMTKAILA 298
           F DVYSII++  EID    NNS   FQ P +  ++FL SREVREF SGAL+GAMTKAILA
Sbjct: 44  FGDVYSIIKE-MEIDHH--NNSTFDFQFPPITFQNFLGSREVREFISGALSGAMTKAILA 100

Query: 299 PLETIRTRMVVGVGSRNISGSFIQVVEQQGWQGLWAGNMINMIRIIPTQ 445
           PLETIRTRMVVGVGS+NI+GSFI+V+EQQGWQGLWAGNMINM+RI+PTQ
Sbjct: 101 PLETIRTRMVVGVGSKNIAGSFIEVIEQQGWQGLWAGNMINMLRIVPTQ 149


>ref|NP_001241139.1| uncharacterized protein LOC100795558 [Glycine max]
           gi|255648051|gb|ACU24481.1| unknown [Glycine max]
          Length = 381

 Score =  147 bits (372), Expect = 7e-34
 Identities = 79/109 (72%), Positives = 91/109 (83%), Gaps = 1/109 (0%)
 Frame = +2

Query: 122 FRDVYSIIEDNTEIDQPLPNNSHLRFQMPHLA-RDFLDSREVREFFSGALAGAMTKAILA 298
           F DV SII++  EID P  +    +FQ P +A ++FL SREVREF SGALAGAM KAILA
Sbjct: 44  FGDVSSIIKE-MEIDHP-NSTFDFQFQFPPIAFQNFLGSREVREFISGALAGAMAKAILA 101

Query: 299 PLETIRTRMVVGVGSRNISGSFIQVVEQQGWQGLWAGNMINMIRIIPTQ 445
           PLETIRTRMVVGVGS+NI+GSFI V+EQQGWQGLWAGNMINM+RI+PTQ
Sbjct: 102 PLETIRTRMVVGVGSKNIAGSFIDVIEQQGWQGLWAGNMINMLRIVPTQ 150


>ref|XP_002311894.1| predicted protein [Populus trichocarpa] gi|222851714|gb|EEE89261.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  145 bits (365), Expect = 4e-33
 Identities = 75/107 (70%), Positives = 86/107 (80%), Gaps = 11/107 (10%)
 Frame = +2

Query: 158 EIDQPLPNNS--------HLRFQMPHL---ARDFLDSREVREFFSGALAGAMTKAILAPL 304
           E+D+P+P  S         LRFQ+P L    RDF+ SRE  EF SGALAGAMTKA+LAPL
Sbjct: 6   ELDEPIPLPSPPTLAVPFELRFQLPDLKLAVRDFMRSREAGEFLSGALAGAMTKAVLAPL 65

Query: 305 ETIRTRMVVGVGSRNISGSFIQVVEQQGWQGLWAGNMINMIRIIPTQ 445
           ETIRTRMVVGVGS+NISGSF++V+EQQGWQGLWAGN INM+RIIPTQ
Sbjct: 66  ETIRTRMVVGVGSKNISGSFLEVIEQQGWQGLWAGNGINMLRIIPTQ 112


>gb|ABK96044.1| unknown [Populus trichocarpa]
          Length = 365

 Score =  145 bits (365), Expect = 4e-33
 Identities = 75/107 (70%), Positives = 86/107 (80%), Gaps = 11/107 (10%)
 Frame = +2

Query: 158 EIDQPLPNNS--------HLRFQMPHL---ARDFLDSREVREFFSGALAGAMTKAILAPL 304
           E+D+P+P  S         LRFQ+P L    RDF+ SRE  EF SGALAGAMTKA+LAPL
Sbjct: 29  ELDEPIPLPSPPTLAVPFELRFQLPDLKLAVRDFMRSREAGEFLSGALAGAMTKAVLAPL 88

Query: 305 ETIRTRMVVGVGSRNISGSFIQVVEQQGWQGLWAGNMINMIRIIPTQ 445
           ETIRTRMVVGVGS+NISGSF++V+EQQGWQGLWAGN INM+RIIPTQ
Sbjct: 89  ETIRTRMVVGVGSKNISGSFLEVIEQQGWQGLWAGNGINMLRIIPTQ 135


>ref|XP_002266396.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic isoform 1
           [Vitis vinifera] gi|297735760|emb|CBI18447.3| unnamed
           protein product [Vitis vinifera]
          Length = 356

 Score =  142 bits (358), Expect = 3e-32
 Identities = 76/119 (63%), Positives = 89/119 (74%), Gaps = 11/119 (9%)
 Frame = +2

Query: 122 FRDVYSI--------IEDNTEIDQPLPNNSHLRFQMPHLAR---DFLDSREVREFFSGAL 268
           F DVY +        IE +  IDQ        RFQ+P L +   DF+ +REV EF SGAL
Sbjct: 15  FGDVYGVMMVPKELEIEKDASIDQ-------FRFQLPDLKQAFQDFMRTREVGEFISGAL 67

Query: 269 AGAMTKAILAPLETIRTRMVVGVGSRNISGSFIQVVEQQGWQGLWAGNMINMIRIIPTQ 445
           AGAMTKA+LAPLETIRTRMVVG+GS+NISGSF++V+EQQGWQGLWAGN INM+RIIPTQ
Sbjct: 68  AGAMTKAVLAPLETIRTRMVVGIGSKNISGSFLEVIEQQGWQGLWAGNTINMLRIIPTQ 126


Top