BLASTX nr result

ID: Glycyrrhiza24_contig00024198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024198
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34587.1| unknown [Medicago truncatula]                          226   3e-57
gb|ACJ83941.1| unknown [Medicago truncatula]                          226   3e-57
gb|AFK45254.1| unknown [Lotus japonicus]                              209   4e-52
gb|ACJ84192.1| unknown [Medicago truncatula]                          203   2e-50
ref|NP_001235252.1| RIN4d protein [Glycine max] gi|255648162|gb|...   201   8e-50

>gb|AFK34587.1| unknown [Medicago truncatula]
          Length = 248

 Score =  226 bits (576), Expect = 3e-57
 Identities = 116/166 (69%), Positives = 128/166 (77%), Gaps = 2/166 (1%)
 Frame = +1

Query: 181 MTTQRTHVPKFGNWDSEENVPYTAYFDKARKGRPGSKMINPNDPEENSDSVLENSSSADL 360
           MTTQR+HVPKFGNW+ E++VPYT YFDKARK RPGSKMINPNDPEEN D VL+NSSS D+
Sbjct: 1   MTTQRSHVPKFGNWEGEDDVPYTVYFDKARKSRPGSKMINPNDPEENPDLVLQNSSSDDV 60

Query: 361 PPSNRRVHSENLSEKGSVRST-QELQKSKEDGDLKHLTGSPARENVGNNKSAGGDSTHRP 537
            P   RV SEN SEKG+VR T  +LQK+KE+GD+KH   SPA                RP
Sbjct: 61  IPPKPRVSSENQSEKGTVRLTHNDLQKNKEEGDVKHSVNSPA----------------RP 104

Query: 538 GGHGAGSADARRRPSRQST-GSEYSVERSPLHRQAKTPGRDSPVWE 672
           GGHG GSAD+RRRPSRQST  SEYSVERSPLHRQAKTPGRDSP WE
Sbjct: 105 GGHGVGSADSRRRPSRQSTASSEYSVERSPLHRQAKTPGRDSPSWE 150


>gb|ACJ83941.1| unknown [Medicago truncatula]
          Length = 248

 Score =  226 bits (576), Expect = 3e-57
 Identities = 116/166 (69%), Positives = 128/166 (77%), Gaps = 2/166 (1%)
 Frame = +1

Query: 181 MTTQRTHVPKFGNWDSEENVPYTAYFDKARKGRPGSKMINPNDPEENSDSVLENSSSADL 360
           MTTQR+HVPKFGNW+ E++VPYT YFDKARK RPGSKMINPNDPEEN D VL+NSSS D+
Sbjct: 1   MTTQRSHVPKFGNWEGEDDVPYTVYFDKARKSRPGSKMINPNDPEENPDLVLQNSSSDDV 60

Query: 361 PPSNRRVHSENLSEKGSVRST-QELQKSKEDGDLKHLTGSPARENVGNNKSAGGDSTHRP 537
            P   RV SEN SEKG+VR T  +LQK+KE+GD+KH   SPA                RP
Sbjct: 61  IPPKPRVSSENQSEKGTVRLTHNDLQKNKEEGDVKHSVNSPA----------------RP 104

Query: 538 GGHGAGSADARRRPSRQST-GSEYSVERSPLHRQAKTPGRDSPVWE 672
           GGHG GSAD+RRRPSRQST  SEYSVERSPLHRQAKTPGRDSP WE
Sbjct: 105 GGHGVGSADSRRRPSRQSTASSEYSVERSPLHRQAKTPGRDSPSWE 150


>gb|AFK45254.1| unknown [Lotus japonicus]
          Length = 250

 Score =  209 bits (532), Expect = 4e-52
 Identities = 109/163 (66%), Positives = 120/163 (73%), Gaps = 2/163 (1%)
 Frame = +1

Query: 190 QRTHVPKFGNWDSEENVPYTAYFDKARKGRPGSKMINPNDPEENSDSVLENSSSADLPPS 369
           QR+HVPKFGNWD E+NVPYTAYFDKARK R G+KMINPNDPEENSD VL+N    +LPPS
Sbjct: 3   QRSHVPKFGNWDGEDNVPYTAYFDKARKDRTGTKMINPNDPEENSDLVLDN----NLPPS 58

Query: 370 NRR--VHSENLSEKGSVRSTQELQKSKEDGDLKHLTGSPARENVGNNKSAGGDSTHRPGG 543
             +  V SE+ S KGS RST E  +S  DGD K    SPAR+          DS  R GG
Sbjct: 59  KSKPGVDSEDPSGKGSARSTYESHRSMADGDPKQFVDSPARQ--------ANDSAPRYGG 110

Query: 544 HGAGSADARRRPSRQSTGSEYSVERSPLHRQAKTPGRDSPVWE 672
            G GSAD R+RPSRQSTGSEYS+ERSPLHRQAKTPGRDSP WE
Sbjct: 111 QGVGSADNRKRPSRQSTGSEYSIERSPLHRQAKTPGRDSPSWE 153


>gb|ACJ84192.1| unknown [Medicago truncatula]
          Length = 260

 Score =  203 bits (517), Expect = 2e-50
 Identities = 114/165 (69%), Positives = 127/165 (76%), Gaps = 4/165 (2%)
 Frame = +1

Query: 190 QRTHVPKFGNWDSEENVPYTAYFDKARKGRPGSKMINPNDPEENSDSVLENSSSADLPPS 369
           QRTHVPKFGNW+S +NVPYTAYFD+ARKGR G+KMINPNDPEEN D VL+NSSS   PPS
Sbjct: 3   QRTHVPKFGNWESNDNVPYTAYFDEARKGRTGTKMINPNDPEENVDLVLDNSSSDHPPPS 62

Query: 370 NR--RVHSENLSEKGSVRSTQELQKSKEDGDLKHLTGSPARENVGNNKSAGGDSTHRPGG 543
           N   R +SE+LS KG VRST E  KS  DGD K    SPAR +  +N+S+  DST RP  
Sbjct: 63  NTKPRANSEDLSGKGLVRSTIESHKSL-DGDPKQYVDSPARHDNASNRSS-NDSTPRP-- 118

Query: 544 HGAGSADARRRPSRQST-GSEYSVERSPLHRQAKTP-GRDSPVWE 672
            G GSAD RRRPSRQST GSE+SVERSPLHRQA+ P GRDSP WE
Sbjct: 119 -GVGSADNRRRPSRQSTAGSEHSVERSPLHRQARAPAGRDSPSWE 162


>ref|NP_001235252.1| RIN4d protein [Glycine max] gi|255648162|gb|ACU24535.1| unknown
           [Glycine max] gi|300079889|gb|ADJ67470.1| RIN4d protein
           [Glycine max]
          Length = 248

 Score =  201 bits (512), Expect = 8e-50
 Identities = 107/161 (66%), Positives = 124/161 (77%)
 Frame = +1

Query: 190 QRTHVPKFGNWDSEENVPYTAYFDKARKGRPGSKMINPNDPEENSDSVLENSSSADLPPS 369
           Q ++VPKFGN +SE+NV  TA+ DKA+KG+ GSKMINPND +ENSD V    SSADLP S
Sbjct: 3   QHSNVPKFGNQESEDNVLDTAHSDKAQKGQSGSKMINPNDTKENSDIV----SSADLPHS 58

Query: 370 NRRVHSENLSEKGSVRSTQELQKSKEDGDLKHLTGSPARENVGNNKSAGGDSTHRPGGHG 549
             RVHSE+ S KGSVR+T ELQKS+EDGD K  T SPAR         GGDS+HR  GHG
Sbjct: 59  KPRVHSEDPSGKGSVRTTHELQKSREDGDPKQFTDSPARHG-------GGDSSHR--GHG 109

Query: 550 AGSADARRRPSRQSTGSEYSVERSPLHRQAKTPGRDSPVWE 672
            GSAD R+RPSRQSTG E++++RSPLHRQAKTPGRDSP WE
Sbjct: 110 VGSADNRKRPSRQSTGPEHNIDRSPLHRQAKTPGRDSPSWE 150


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