BLASTX nr result

ID: Glycyrrhiza24_contig00024162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024162
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542846.1| PREDICTED: structural maintenance of chromos...   324   1e-86
ref|XP_002304405.1| condensin complex components subunit [Populu...   323   2e-86
ref|XP_002326795.1| condensin complex components subunit [Populu...   323   3e-86
ref|XP_003540523.1| PREDICTED: structural maintenance of chromos...   322   4e-86
gb|AFK40367.1| unknown [Lotus japonicus]                              319   3e-85

>ref|XP_003542846.1| PREDICTED: structural maintenance of chromosomes protein 2-1-like
            [Glycine max]
          Length = 1176

 Score =  324 bits (830), Expect = 1e-86
 Identities = 165/182 (90%), Positives = 166/182 (91%)
 Frame = +2

Query: 2    EYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLNVTWIKVNNDFGSIFSTLLPGTMAKL 181
            EYNDLMSKK IIENDKSKIKKVIEELDEKKKETLNVTWIKVNNDFGSIFSTLLPGTMAKL
Sbjct: 995  EYNDLMSKKYIIENDKSKIKKVIEELDEKKKETLNVTWIKVNNDFGSIFSTLLPGTMAKL 1054

Query: 182  EPPEGCNFLDGLEVRVAFGGVWKQSLSELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVD 361
            EPPEGC+FLDGLEVRVAFG VWKQSLSELSGGQR             FKPAPLYILDEVD
Sbjct: 1055 EPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVD 1114

Query: 362  AALDLSHTQNIGRMIKTHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKQ 541
            AALDLSHTQNIGRMIK HFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKQ
Sbjct: 1115 AALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKQ 1174

Query: 542  SK 547
            SK
Sbjct: 1175 SK 1176


>ref|XP_002304405.1| condensin complex components subunit [Populus trichocarpa]
            gi|222841837|gb|EEE79384.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1176

 Score =  323 bits (829), Expect = 2e-86
 Identities = 163/181 (90%), Positives = 166/181 (91%)
 Frame = +2

Query: 2    EYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLNVTWIKVNNDFGSIFSTLLPGTMAKL 181
            EYNDLMSKKNIIENDKSKI KVIEELDEKKKETL VTW+KVNNDFGSIFSTLLPGTMAKL
Sbjct: 995  EYNDLMSKKNIIENDKSKINKVIEELDEKKKETLKVTWVKVNNDFGSIFSTLLPGTMAKL 1054

Query: 182  EPPEGCNFLDGLEVRVAFGGVWKQSLSELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVD 361
            EPPEGC+FLDGLEVRVAFGGVWKQSLSELSGGQR             FKPAPLYILDEVD
Sbjct: 1055 EPPEGCSFLDGLEVRVAFGGVWKQSLSELSGGQRSLLALSIILALLLFKPAPLYILDEVD 1114

Query: 362  AALDLSHTQNIGRMIKTHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKQ 541
            AALDLSHTQNIGRMIKTHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKQ
Sbjct: 1115 AALDLSHTQNIGRMIKTHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKQ 1174

Query: 542  S 544
            +
Sbjct: 1175 N 1175


>ref|XP_002326795.1| condensin complex components subunit [Populus trichocarpa]
            gi|222834117|gb|EEE72594.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1176

 Score =  323 bits (827), Expect = 3e-86
 Identities = 162/182 (89%), Positives = 166/182 (91%)
 Frame = +2

Query: 2    EYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLNVTWIKVNNDFGSIFSTLLPGTMAKL 181
            EYNDLMSKKNIIENDKSKIKKVIEELDEKKKETL VTW+KVNNDFGS+FSTLLPGTMAKL
Sbjct: 995  EYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLKVTWVKVNNDFGSVFSTLLPGTMAKL 1054

Query: 182  EPPEGCNFLDGLEVRVAFGGVWKQSLSELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVD 361
            EPPEGC+FLDGLEVRVAFG VWKQSLSELSGGQR             FKPAPLYILDEVD
Sbjct: 1055 EPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVD 1114

Query: 362  AALDLSHTQNIGRMIKTHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKQ 541
            AALDLSHTQNIGRMIK HFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKQ
Sbjct: 1115 AALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKQ 1174

Query: 542  SK 547
            +K
Sbjct: 1175 NK 1176


>ref|XP_003540523.1| PREDICTED: structural maintenance of chromosomes protein 2-1-like
            [Glycine max]
          Length = 1176

 Score =  322 bits (826), Expect = 4e-86
 Identities = 164/182 (90%), Positives = 165/182 (90%)
 Frame = +2

Query: 2    EYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLNVTWIKVNNDFGSIFSTLLPGTMAKL 181
            EYNDLMSKKNIIENDKSKIK VIEELDEKKKETLNVTWIKVNNDFGSIFS LLPGTMAKL
Sbjct: 995  EYNDLMSKKNIIENDKSKIKMVIEELDEKKKETLNVTWIKVNNDFGSIFSMLLPGTMAKL 1054

Query: 182  EPPEGCNFLDGLEVRVAFGGVWKQSLSELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVD 361
            EPPEGC+FLDGLEVRVAFG VWKQSLSELSGGQR             FKPAPLYILDEVD
Sbjct: 1055 EPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVD 1114

Query: 362  AALDLSHTQNIGRMIKTHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKQ 541
            AALDLSHTQNIGRMIK HFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKQ
Sbjct: 1115 AALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKQ 1174

Query: 542  SK 547
            SK
Sbjct: 1175 SK 1176


>gb|AFK40367.1| unknown [Lotus japonicus]
          Length = 191

 Score =  319 bits (818), Expect = 3e-85
 Identities = 161/182 (88%), Positives = 165/182 (90%)
 Frame = +2

Query: 2   EYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLNVTWIKVNNDFGSIFSTLLPGTMAKL 181
           EYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLNVTW KVN+DFGSIFSTLLPGTMAKL
Sbjct: 10  EYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLNVTWTKVNSDFGSIFSTLLPGTMAKL 69

Query: 182 EPPEGCNFLDGLEVRVAFGGVWKQSLSELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVD 361
           EPPEGC+FLDGLEV+VAFG VWKQSLSELSGGQR             FKPAPLYILDEVD
Sbjct: 70  EPPEGCSFLDGLEVKVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVD 129

Query: 362 AALDLSHTQNIGRMIKTHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKQ 541
           AALDLSHTQNIGRMIK HFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVA KQ
Sbjct: 130 AALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVATKQ 189

Query: 542 SK 547
           +K
Sbjct: 190 NK 191


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