BLASTX nr result

ID: Glycyrrhiza24_contig00024158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024158
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530480.1| PREDICTED: protein MEI2-like 4-like [Glycine...   196   2e-48
ref|XP_002267714.2| PREDICTED: protein MEI2-like 4-like [Vitis v...   159   2e-37
emb|CBI29257.3| unnamed protein product [Vitis vinifera]              159   2e-37
emb|CAN72509.1| hypothetical protein VITISV_040729 [Vitis vinifera]   159   2e-37
ref|NP_001234547.1| AML1 [Solanum lycopersicum] gi|47834703|gb|A...   149   2e-34

>ref|XP_003530480.1| PREDICTED: protein MEI2-like 4-like [Glycine max]
          Length = 719

 Score =  196 bits (498), Expect = 2e-48
 Identities = 94/130 (72%), Positives = 106/130 (81%), Gaps = 1/130 (0%)
 Frame = +3

Query: 6   SASLWDRRHTYAGDSPQASAFNPSSIGNMRFSSNTTAHCVDFVPHNIFPHFGGSCVDLQI 185
           SA  WDRRHTYAG+S          +GNM+FS NT AHCVDFV +NIFPHFGG+CVDL++
Sbjct: 432 SAPFWDRRHTYAGES----------LGNMQFSGNTAAHCVDFVSYNIFPHFGGNCVDLRV 481

Query: 186 LPNNLGLHFHNQRGLMFPGRNHMINSFDTHK-RVRSRRNEGVSNLADMKQFELDIDRIKR 362
           LP NLG+HFHNQ  LMFP RNHMINSF+THK R RSRRNEG+ NL D KQ+ELDIDRIK+
Sbjct: 482 LPKNLGVHFHNQGDLMFPRRNHMINSFETHKQRTRSRRNEGLPNLDDKKQYELDIDRIKK 541

Query: 363 GEDNRTTLMI 392
           GEDNRTTLMI
Sbjct: 542 GEDNRTTLMI 551


>ref|XP_002267714.2| PREDICTED: protein MEI2-like 4-like [Vitis vinifera]
          Length = 965

 Score =  159 bits (402), Expect = 2e-37
 Identities = 81/132 (61%), Positives = 102/132 (77%), Gaps = 5/132 (3%)
 Frame = +3

Query: 12   SLWDRRHTYAGDSPQASAFNPSSIGNMRFSSNTTAHCVDFVPHNIFPHFGGSCVDLQILP 191
            S+WDRRHTYAG+S +AS F+P S+G+MR S+N+  H ++F PHNIFP  GG+C+DL I P
Sbjct: 666  SIWDRRHTYAGESSEASGFHPGSLGSMRISNNSL-HPLEFAPHNIFPSVGGNCIDLSIPP 724

Query: 192  NNLGLHFHNQRGLMFPGRNH---MINSFD-THKRVRSRRNEGVSNLAD-MKQFELDIDRI 356
             N+GLH H+QR LMFPGR+    M++SFD  ++R RSRRN+  SN  D  KQ+ELDIDRI
Sbjct: 725  KNVGLHSHHQRCLMFPGRSQLIPMMSSFDPPNERSRSRRNDNSSNQVDNKKQYELDIDRI 784

Query: 357  KRGEDNRTTLMI 392
             RGED RTTLMI
Sbjct: 785  LRGEDTRTTLMI 796


>emb|CBI29257.3| unnamed protein product [Vitis vinifera]
          Length = 986

 Score =  159 bits (402), Expect = 2e-37
 Identities = 81/132 (61%), Positives = 102/132 (77%), Gaps = 5/132 (3%)
 Frame = +3

Query: 12   SLWDRRHTYAGDSPQASAFNPSSIGNMRFSSNTTAHCVDFVPHNIFPHFGGSCVDLQILP 191
            S+WDRRHTYAG+S +AS F+P S+G+MR S+N+  H ++F PHNIFP  GG+C+DL I P
Sbjct: 687  SIWDRRHTYAGESSEASGFHPGSLGSMRISNNSL-HPLEFAPHNIFPSVGGNCIDLSIPP 745

Query: 192  NNLGLHFHNQRGLMFPGRNH---MINSFD-THKRVRSRRNEGVSNLAD-MKQFELDIDRI 356
             N+GLH H+QR LMFPGR+    M++SFD  ++R RSRRN+  SN  D  KQ+ELDIDRI
Sbjct: 746  KNVGLHSHHQRCLMFPGRSQLIPMMSSFDPPNERSRSRRNDNSSNQVDNKKQYELDIDRI 805

Query: 357  KRGEDNRTTLMI 392
             RGED RTTLMI
Sbjct: 806  LRGEDTRTTLMI 817


>emb|CAN72509.1| hypothetical protein VITISV_040729 [Vitis vinifera]
          Length = 932

 Score =  159 bits (402), Expect = 2e-37
 Identities = 81/132 (61%), Positives = 102/132 (77%), Gaps = 5/132 (3%)
 Frame = +3

Query: 12   SLWDRRHTYAGDSPQASAFNPSSIGNMRFSSNTTAHCVDFVPHNIFPHFGGSCVDLQILP 191
            S+WDRRHTYAG+S +AS F+P S+G+MR S+N+  H ++F PHNIFP  GG+C+DL I P
Sbjct: 644  SIWDRRHTYAGESSEASGFHPGSLGSMRISNNSL-HPLEFAPHNIFPSVGGNCIDLSIPP 702

Query: 192  NNLGLHFHNQRGLMFPGRNH---MINSFD-THKRVRSRRNEGVSNLAD-MKQFELDIDRI 356
             N+GLH H+QR LMFPGR+    M++SFD  ++R RSRRN+  SN  D  KQ+ELDIDRI
Sbjct: 703  KNVGLHSHHQRCLMFPGRSQLIPMMSSFDPPNERSRSRRNDNSSNQVDNKKQYELDIDRI 762

Query: 357  KRGEDNRTTLMI 392
             RGED RTTLMI
Sbjct: 763  LRGEDTRTTLMI 774


>ref|NP_001234547.1| AML1 [Solanum lycopersicum] gi|47834703|gb|AAT39005.1| AML1 [Solanum
            lycopersicum]
          Length = 971

 Score =  149 bits (377), Expect = 2e-34
 Identities = 79/134 (58%), Positives = 100/134 (74%), Gaps = 5/134 (3%)
 Frame = +3

Query: 6    SASLWDRRHTYAGDSPQASAFNPSSIGNMRFSSNTTAHCVDFVPHNIFPHFGGSCVDLQI 185
            S SLWDRRH YAG+SP AS F+P S+G+MR S N + H ++F+PHN+F   GGSC+DL +
Sbjct: 684  SLSLWDRRHAYAGESPDASGFHPGSLGSMRISGN-SPHPLEFIPHNVFSRTGGSCIDLPM 742

Query: 186  LPNNLGLHFHNQRGLMFPGRNH---MINSFDT-HKRVRSRRNEGVSNLAD-MKQFELDID 350
              +N+G   H QR LMFPGR     MI+SFD+ ++R+RSRRNEG S+  D  KQFELDI+
Sbjct: 743  SSSNVG---HQQRNLMFPGRAQIIPMISSFDSPNERMRSRRNEGNSSQTDNKKQFELDIE 799

Query: 351  RIKRGEDNRTTLMI 392
            RI RG+D RTTLMI
Sbjct: 800  RIARGDDKRTTLMI 813


Top