BLASTX nr result

ID: Glycyrrhiza24_contig00024147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024147
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606020.1| F-box family protein [Medicago truncatula] g...    55   1e-12
ref|XP_003598684.1| F-box/LRR-repeat protein [Medicago truncatul...    54   9e-10
ref|XP_003526558.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    60   3e-09
ref|XP_003604538.1| F-box family-9 [Medicago truncatula] gi|3555...    52   9e-09
ref|XP_003606071.1| F-box family protein [Medicago truncatula] g...    50   9e-09

>ref|XP_003606020.1| F-box family protein [Medicago truncatula]
           gi|357476013|ref|XP_003608292.1| F-box family protein
           [Medicago truncatula] gi|355507075|gb|AES88217.1| F-box
           family protein [Medicago truncatula]
           gi|355509347|gb|AES90489.1| F-box family protein
           [Medicago truncatula]
          Length = 489

 Score = 55.1 bits (131), Expect(2) = 1e-12
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = -1

Query: 241 SWLRELAHIKSLTVTASTLQVLSLVPDLLKVKL 143
           SWL ELA+IKSLTV+ASTLQVLSL+PDLLK KL
Sbjct: 297 SWLLELANIKSLTVSASTLQVLSLIPDLLKDKL 329



 Score = 42.7 bits (99), Expect(2) = 1e-12
 Identities = 18/28 (64%), Positives = 25/28 (89%)
 Frame = -3

Query: 140 LCNLKTLKIKMEPLSYGLVMILRAAELQ 57
           LCNLK+L+++++PLSYGL M LR A+LQ
Sbjct: 332 LCNLKSLRVQLKPLSYGLSMTLRTAKLQ 359


>ref|XP_003598684.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355487732|gb|AES68935.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 411

 Score = 53.5 bits (127), Expect(2) = 9e-10
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = -1

Query: 241 SWLRELAHIKSLTVTASTLQVLSLVPDLLKVKL 143
           SWL ELA+IKSLTV+++TLQVLS VPDL+KVKL
Sbjct: 296 SWLLELANIKSLTVSSNTLQVLSFVPDLIKVKL 328



 Score = 34.3 bits (77), Expect(2) = 9e-10
 Identities = 14/28 (50%), Positives = 23/28 (82%)
 Frame = -3

Query: 140 LCNLKTLKIKMEPLSYGLVMILRAAELQ 57
           LCNL++L+++M+PL+ GL MILR  + +
Sbjct: 331 LCNLESLQVEMKPLTPGLYMILRCRKFK 358


>ref|XP_003526558.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g78750-like [Glycine
           max]
          Length = 384

 Score = 59.7 bits (143), Expect(2) = 3e-09
 Identities = 27/36 (75%), Positives = 34/36 (94%)
 Frame = -1

Query: 241 SWLRELAHIKSLTVTASTLQVLSLVPDLLKVKLPCV 134
           SWL ELA++KSLTV+ASTLQVL L+P+LLK+KLPC+
Sbjct: 287 SWLLELANVKSLTVSASTLQVLFLIPELLKIKLPCL 322



 Score = 26.2 bits (56), Expect(2) = 3e-09
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = -3

Query: 140 LCNLKTLKIKMEPLSYGLVMILRAAE 63
           L NLK+LK++++PLS    M L+AA+
Sbjct: 322 LGNLKSLKVELKPLSPIFSMRLKAAK 347


>ref|XP_003604538.1| F-box family-9 [Medicago truncatula] gi|355505593|gb|AES86735.1|
           F-box family-9 [Medicago truncatula]
          Length = 455

 Score = 52.0 bits (123), Expect(2) = 9e-09
 Identities = 25/34 (73%), Positives = 30/34 (88%)
 Frame = -1

Query: 241 SWLRELAHIKSLTVTASTLQVLSLVPDLLKVKLP 140
           SWL   A+IKSLTVTA+TLQVLSL PD+LK++LP
Sbjct: 284 SWLVVFANIKSLTVTATTLQVLSLYPDVLKIRLP 317



 Score = 32.3 bits (72), Expect(2) = 9e-09
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = -3

Query: 140 LCNLKTLKIKMEPLSYGLVMILRAAELQ 57
           L NLK+LK++ME L YG  M LR  +LQ
Sbjct: 319 LHNLKSLKVRMEELLYGFRMTLRDIKLQ 346


>ref|XP_003606071.1| F-box family protein [Medicago truncatula]
           gi|355507126|gb|AES88268.1| F-box family protein
           [Medicago truncatula]
          Length = 428

 Score = 49.7 bits (117), Expect(2) = 9e-09
 Identities = 23/34 (67%), Positives = 30/34 (88%)
 Frame = -1

Query: 241 SWLRELAHIKSLTVTASTLQVLSLVPDLLKVKLP 140
           +WL+EL  +KSL V++ TLQ+LSLVPDLL+VKLP
Sbjct: 320 NWLQELLAVKSLKVSSITLQILSLVPDLLEVKLP 353



 Score = 34.7 bits (78), Expect(2) = 9e-09
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = -3

Query: 140 LCNLKTLKIKMEPLSYGLVMILRAAEL 60
           LCNLK ++IKM+PLS+ L  IL+ A L
Sbjct: 355 LCNLKLVEIKMQPLSFALSCILKDAML 381


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