BLASTX nr result

ID: Glycyrrhiza24_contig00024134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024134
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588895.1| U-box domain-containing protein [Medicago tr...    61   8e-08
ref|XP_002867271.1| armadillo/beta-catenin repeat family protein...    56   4e-06
ref|NP_194917.1| armadillo/beta-catenin-like repeat-containing p...    55   5e-06

>ref|XP_003588895.1| U-box domain-containing protein [Medicago truncatula]
           gi|355477943|gb|AES59146.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 497

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
 Frame = +3

Query: 84  TKTTTFSSHLRLWNSLSASSFRRLIFDAVSC-GASSRYHHRRQ 209
           +K  TFS H RLWNSLS +S RRLIF AVSC GA+SRY+HRR+
Sbjct: 24  SKPPTFSHHFRLWNSLSIASLRRLIFHAVSCGGATSRYNHRRR 66


>ref|XP_002867271.1| armadillo/beta-catenin repeat family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313107|gb|EFH43530.1|
           armadillo/beta-catenin repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 517

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
 Frame = +3

Query: 27  MANCHRXXXXXXXXXXXXXTKTTTFS-SHLRLWNSLSASSFRRLIFDAVSCGASSRYHH 200
           MA CHR             T +++ S +H RLW++ S S+FRR I DAVSCG SSRY H
Sbjct: 1   MAKCHRNNIGSLILDRAPSTSSSSTSGNHFRLWSTFSRSTFRRKIVDAVSCGGSSRYRH 59


>ref|NP_194917.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis
           thaliana] gi|334187073|ref|NP_001190883.1|
           armadillo/beta-catenin-like repeat-containing protein
           [Arabidopsis thaliana] gi|4584528|emb|CAB40759.1|
           putative protein [Arabidopsis thaliana]
           gi|7270092|emb|CAB79907.1| putative protein [Arabidopsis
           thaliana] gi|110736926|dbj|BAF00420.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|190341119|gb|ACE74718.1| At4g31890 [Arabidopsis
           thaliana] gi|332660574|gb|AEE85974.1|
           armadillo/beta-catenin-like repeat-containing protein
           [Arabidopsis thaliana] gi|332660575|gb|AEE85975.1|
           armadillo/beta-catenin-like repeat-containing protein
           [Arabidopsis thaliana]
          Length = 518

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = +3

Query: 27  MANCHRXXXXXXXXXXXXXTKTTTFSS-HLRLWNSLSASSFRRLIFDAVSCGASSRYHH 200
           MA CHR             T +++ S  H RLW++ S S+FRR I DAVSCG SSRY H
Sbjct: 1   MAKCHRNNIGSLILDRAPSTSSSSTSGYHFRLWSTFSRSTFRRKIVDAVSCGGSSRYRH 59


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