BLASTX nr result

ID: Glycyrrhiza24_contig00024133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024133
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588895.1| U-box domain-containing protein [Medicago tr...   115   3e-24
ref|XP_003544595.1| PREDICTED: U-box domain-containing protein 6...    95   7e-18
ref|XP_004159256.1| PREDICTED: U-box domain-containing protein 1...    92   4e-17
ref|XP_004138845.1| PREDICTED: U-box domain-containing protein 4...    92   4e-17
ref|XP_003550208.1| PREDICTED: U-box domain-containing protein 7...    92   4e-17

>ref|XP_003588895.1| U-box domain-containing protein [Medicago truncatula]
           gi|355477943|gb|AES59146.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 497

 Score =  115 bits (289), Expect = 3e-24
 Identities = 60/74 (81%), Positives = 68/74 (91%)
 Frame = -3

Query: 224 ETKNKEEALEELKRLVKDLQQGEDSEKRRDAASTVRMLAKENLEVRGTLAMLGAIPPLVA 45
           E K KEEALE+LKRLVKDL + +DS KRR+AA+TVRMLAKENLEVRGTL+MLGAIPPLVA
Sbjct: 117 EAKKKEEALEKLKRLVKDLHEEDDSVKRREAATTVRMLAKENLEVRGTLSMLGAIPPLVA 176

Query: 44  MLDSQDLGSQIASL 3
           MLDS+D+ SQIASL
Sbjct: 177 MLDSKDVDSQIASL 190


>ref|XP_003544595.1| PREDICTED: U-box domain-containing protein 6-like [Glycine max]
          Length = 500

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 55/81 (67%), Positives = 65/81 (80%), Gaps = 7/81 (8%)
 Frame = -3

Query: 224 ETKNKEEALEELKRLVKDLQQGED----SEKRRDAASTVRMLAKENLEVRGTLAMLGAIP 57
           ETK KEE LEELK LVK+LQQ E+    ++K+R+AA+ VR+LAKE+LEVRGTLAMLGAIP
Sbjct: 101 ETKKKEEKLEELKLLVKELQQHEEVDDSTKKKREAAAKVRLLAKEDLEVRGTLAMLGAIP 160

Query: 56  PLVAMLDS---QDLGSQIASL 3
           PLVAMLD     D+ S IASL
Sbjct: 161 PLVAMLDETELNDVDSLIASL 181


>ref|XP_004159256.1| PREDICTED: U-box domain-containing protein 12-like [Cucumis
           sativus]
          Length = 506

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/74 (66%), Positives = 62/74 (83%)
 Frame = -3

Query: 224 ETKNKEEALEELKRLVKDLQQGEDSEKRRDAASTVRMLAKENLEVRGTLAMLGAIPPLVA 45
           ET+ KE+ L+ELKR VKDLQ  ED  K++ AAS+VR++AKE+L +RGTLA+LGAIPPLVA
Sbjct: 116 ETRRKEDELKELKRTVKDLQ-AEDLGKQKSAASSVRLMAKEDLVIRGTLALLGAIPPLVA 174

Query: 44  MLDSQDLGSQIASL 3
           MLD +D  SQIA+L
Sbjct: 175 MLDLEDEESQIAAL 188


>ref|XP_004138845.1| PREDICTED: U-box domain-containing protein 4-like [Cucumis sativus]
          Length = 409

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/74 (66%), Positives = 62/74 (83%)
 Frame = -3

Query: 224 ETKNKEEALEELKRLVKDLQQGEDSEKRRDAASTVRMLAKENLEVRGTLAMLGAIPPLVA 45
           ET+ KE+ L+ELKR VKDLQ  ED  K++ AAS+VR++AKE+L +RGTLA+LGAIPPLVA
Sbjct: 116 ETRRKEDELKELKRTVKDLQ-AEDLGKQKSAASSVRLMAKEDLVIRGTLALLGAIPPLVA 174

Query: 44  MLDSQDLGSQIASL 3
           MLD +D  SQIA+L
Sbjct: 175 MLDLEDEESQIAAL 188


>ref|XP_003550208.1| PREDICTED: U-box domain-containing protein 7-like [Glycine max]
          Length = 503

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 52/80 (65%), Positives = 62/80 (77%), Gaps = 6/80 (7%)
 Frame = -3

Query: 224 ETKNKEEALEELKRLVKDLQQGEDSE---KRRDAASTVRMLAKENLEVRGTLAMLGAIPP 54
           ETK KEE LE+LKRLVK+LQQ E+     K+ +AA+ VR+LAKE LEVRGTLAMLGAIPP
Sbjct: 106 ETKKKEEKLEDLKRLVKELQQHEEDSTKNKKSEAAAKVRLLAKEELEVRGTLAMLGAIPP 165

Query: 53  LVAMLD---SQDLGSQIASL 3
           LVAMLD     D+ S ++SL
Sbjct: 166 LVAMLDETEQNDVNSLVSSL 185


Top