BLASTX nr result

ID: Glycyrrhiza24_contig00024119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024119
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538642.1| PREDICTED: uncharacterized protein LOC100802...   250   1e-64
ref|XP_003610721.1| 50S ribosomal protein L18 [Medicago truncatu...   249   2e-64
ref|XP_002311628.1| predicted protein [Populus trichocarpa] gi|2...   221   4e-56
ref|XP_002278526.1| PREDICTED: uncharacterized protein LOC100249...   216   2e-54
ref|XP_002517135.1| structural constituent of ribosome, putative...   214   5e-54

>ref|XP_003538642.1| PREDICTED: uncharacterized protein LOC100802391 [Glycine max]
          Length = 329

 Score =  250 bits (638), Expect = 1e-64
 Identities = 123/134 (91%), Positives = 130/134 (97%)
 Frame = -1

Query: 478 NEINDVSPVNKRQRTPTFNQLTGPYHEPFCLDIYISKASVRACIVHRVTSKVVAVAHSIS 299
           ++IND S VNKRQRTPTFNQLTGPYHEPFCLDI+ISKASVRAC+VHRVTSKVVAVAHSIS
Sbjct: 192 DDINDGSTVNKRQRTPTFNQLTGPYHEPFCLDIFISKASVRACVVHRVTSKVVAVAHSIS 251

Query: 298 KDMKFDLASTKNKTTCAAVGAILAQRALADDIHDVIYTPRKGERVEGKLQIVLHSIIDNG 119
           KD KFDLASTKNKTTCAAVGAILAQRALADDIHD++YTPRKGERVEGKLQIVL SIIDNG
Sbjct: 252 KDFKFDLASTKNKTTCAAVGAILAQRALADDIHDIVYTPRKGERVEGKLQIVLQSIIDNG 311

Query: 118 INVKLKIKQRPKKS 77
           INVK+KIKQRPKKS
Sbjct: 312 INVKVKIKQRPKKS 325


>ref|XP_003610721.1| 50S ribosomal protein L18 [Medicago truncatula]
           gi|355512056|gb|AES93679.1| 50S ribosomal protein L18
           [Medicago truncatula]
          Length = 404

 Score =  249 bits (635), Expect = 2e-64
 Identities = 123/137 (89%), Positives = 130/137 (94%)
 Frame = -1

Query: 478 NEINDVSPVNKRQRTPTFNQLTGPYHEPFCLDIYISKASVRACIVHRVTSKVVAVAHSIS 299
           +EIND SPVNK+QR PTFNQLTGPYHEPFCLDIYISKASVRACIVHRVTSKVV VAHSIS
Sbjct: 216 DEINDSSPVNKKQRVPTFNQLTGPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSIS 275

Query: 298 KDMKFDLASTKNKTTCAAVGAILAQRALADDIHDVIYTPRKGERVEGKLQIVLHSIIDNG 119
           KD+KFDL STKNKTTCAAVG ILAQRALADDIHD+IYTPRKGERVEGKLQIVL+SIID+G
Sbjct: 276 KDLKFDLTSTKNKTTCAAVGKILAQRALADDIHDIIYTPRKGERVEGKLQIVLNSIIDSG 335

Query: 118 INVKLKIKQRPKKSSFS 68
           INVKLKIKQR KK SF+
Sbjct: 336 INVKLKIKQRQKKKSFT 352


>ref|XP_002311628.1| predicted protein [Populus trichocarpa] gi|222851448|gb|EEE88995.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  221 bits (564), Expect = 4e-56
 Identities = 109/127 (85%), Positives = 118/127 (92%), Gaps = 1/127 (0%)
 Frame = -1

Query: 448 KRQRTPTFNQLTGPYHEPFCLDIYISKASVRACIVHRVTSKVVAVAHSISKDMKFDLAST 269
           K+ RTPTFNQLTGPYHEPFCLDIYISKASVRAC++HRVTSKVVAVAHSISKD KFDLAST
Sbjct: 216 KKIRTPTFNQLTGPYHEPFCLDIYISKASVRACVIHRVTSKVVAVAHSISKDFKFDLAST 275

Query: 268 KNKTTCAAVGAILAQRALADDIHDVIYTPRKGERVEGKLQIVLHSIIDNGINVKLKIKQR 89
           KN T CAAVG ILAQRALADDIHDV+YTPRKGER+EGKLQIVL +IIDNGINVK+K+KQR
Sbjct: 276 KNATACAAVGGILAQRALADDIHDVVYTPRKGERLEGKLQIVLQAIIDNGINVKVKLKQR 335

Query: 88  -PKKSSF 71
            P K+ F
Sbjct: 336 KPSKARF 342


>ref|XP_002278526.1| PREDICTED: uncharacterized protein LOC100249372 [Vitis vinifera]
           gi|297737055|emb|CBI26256.3| unnamed protein product
           [Vitis vinifera]
          Length = 348

 Score =  216 bits (549), Expect = 2e-54
 Identities = 107/135 (79%), Positives = 119/135 (88%), Gaps = 1/135 (0%)
 Frame = -1

Query: 466 DVSPVNKRQRTPTFNQLTGPYHEPFCLDIYISKASVRACIVHRVTSKVVAVAHSISKDMK 287
           D S V K+ RTPTFNQLT PYHEPFCLDI+ISK SVRACI+HRVTSKVVAVAHSISKDMK
Sbjct: 207 DSSLVEKKLRTPTFNQLTAPYHEPFCLDIFISKGSVRACIIHRVTSKVVAVAHSISKDMK 266

Query: 286 FDLASTKNKTTCAAVGAILAQRALADDIHDVIYTPRKGERVEGKLQIVLHSIIDNGINVK 107
           FDL ST+N T CAAVG ILAQRALADDIHD +YTPRKG+++EGKLQIVL SIIDNG+NVK
Sbjct: 267 FDLTSTRNVTACAAVGRILAQRALADDIHDTVYTPRKGDKLEGKLQIVLQSIIDNGVNVK 326

Query: 106 LKIKQR-PKKSSFSP 65
           +K+KQR  KK+S  P
Sbjct: 327 VKLKQRKTKKASHLP 341


>ref|XP_002517135.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223543770|gb|EEF45298.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 140

 Score =  214 bits (546), Expect = 5e-54
 Identities = 102/134 (76%), Positives = 119/134 (88%)
 Frame = -1

Query: 463 VSPVNKRQRTPTFNQLTGPYHEPFCLDIYISKASVRACIVHRVTSKVVAVAHSISKDMKF 284
           ++   K+ RTPTFNQLTGPYHEPFCLDIYISKASVRAC++HRVTSKVVAVAHSISKD+KF
Sbjct: 5   INVAKKKVRTPTFNQLTGPYHEPFCLDIYISKASVRACVIHRVTSKVVAVAHSISKDLKF 64

Query: 283 DLASTKNKTTCAAVGAILAQRALADDIHDVIYTPRKGERVEGKLQIVLHSIIDNGINVKL 104
           DL+ST+N   CA VGA+LAQRALADDIHDVIYT RKGE++EGKLQIVL SI+DNGINVK+
Sbjct: 65  DLSSTRNVAACATVGAVLAQRALADDIHDVIYTQRKGEKLEGKLQIVLQSIVDNGINVKV 124

Query: 103 KIKQRPKKSSFSPR 62
           K+KQR +  +  P+
Sbjct: 125 KLKQRQRGKASLPQ 138


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