BLASTX nr result

ID: Glycyrrhiza24_contig00024090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024090
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535524.1| PREDICTED: probable lysine-specific demethyl...   190   9e-47
ref|XP_003555439.1| PREDICTED: probable lysine-specific demethyl...   188   3e-46
ref|XP_003591873.1| Zinc finger protein [Medicago truncatula] gi...   177   8e-43
emb|CBI31438.3| unnamed protein product [Vitis vinifera]              176   2e-42
ref|XP_002273747.1| PREDICTED: probable lysine-specific demethyl...   176   2e-42

>ref|XP_003535524.1| PREDICTED: probable lysine-specific demethylase ELF6-like [Glycine
           max]
          Length = 1499

 Score =  190 bits (483), Expect = 9e-47
 Identities = 100/121 (82%), Positives = 105/121 (86%), Gaps = 5/121 (4%)
 Frame = +3

Query: 3   SLGVGNSPKSGAGDSGSDAVLRAVFTTRHQELGQS--VKKPKGT---PLSGVHKQVWQSG 167
           SLGV NS K+ +GD  SD VLRAVFTTRHQELGQS  VKK KGT   PLSGVHKQVWQSG
Sbjct: 80  SLGVCNSSKTSSGDGSSDGVLRAVFTTRHQELGQSQSVKKAKGTVQNPLSGVHKQVWQSG 139

Query: 168 EVYTLEQFESKSKSFARNVLGMVKDVSPLVIEAMFWKAALEKPIYVEYANDVPGSAFGES 347
           E YTLEQFESKSKSFA++VLG VKDVSPLVIE+MFWKA LEKPIYVEYANDVPGSAF ES
Sbjct: 140 EAYTLEQFESKSKSFAKSVLGSVKDVSPLVIESMFWKATLEKPIYVEYANDVPGSAFEES 199

Query: 348 K 350
           K
Sbjct: 200 K 200


>ref|XP_003555439.1| PREDICTED: probable lysine-specific demethylase ELF6-like [Glycine
           max]
          Length = 1481

 Score =  188 bits (478), Expect = 3e-46
 Identities = 99/121 (81%), Positives = 105/121 (86%), Gaps = 5/121 (4%)
 Frame = +3

Query: 3   SLGVGNSPKSGAGDSGSDAVLRAVFTTRHQELG--QSVKKPKGT---PLSGVHKQVWQSG 167
           SLGV NS K+G GD  SD V RAVFTTRHQELG  Q+VKK KGT   PLSGVHKQVWQSG
Sbjct: 80  SLGVCNSSKTGYGDGSSDGVSRAVFTTRHQELGRSQNVKKAKGTVQNPLSGVHKQVWQSG 139

Query: 168 EVYTLEQFESKSKSFARNVLGMVKDVSPLVIEAMFWKAALEKPIYVEYANDVPGSAFGES 347
           EVYTLEQFESKSKSFA++VLG VKDVSPLVIE++FWKA LEKPIYVEYANDVPGSAF ES
Sbjct: 140 EVYTLEQFESKSKSFAKSVLGSVKDVSPLVIESLFWKATLEKPIYVEYANDVPGSAFEES 199

Query: 348 K 350
           K
Sbjct: 200 K 200


>ref|XP_003591873.1| Zinc finger protein [Medicago truncatula]
           gi|355480921|gb|AES62124.1| Zinc finger protein
           [Medicago truncatula]
          Length = 1586

 Score =  177 bits (449), Expect = 8e-43
 Identities = 88/119 (73%), Positives = 102/119 (85%), Gaps = 3/119 (2%)
 Frame = +3

Query: 3   SLGVGNSPKSGAGDSGSDAVLRAVFTTRHQELGQSVKKPKGT---PLSGVHKQVWQSGEV 173
           SLG GNS K G+GDSG+D   RA+FTTR QE+GQ+VKK KG     ++ VHKQVWQSGEV
Sbjct: 80  SLGAGNSWKMGSGDSGNDGESRALFTTRQQEVGQNVKKSKGVVQKSMACVHKQVWQSGEV 139

Query: 174 YTLEQFESKSKSFARNVLGMVKDVSPLVIEAMFWKAALEKPIYVEYANDVPGSAFGESK 350
           YT+EQFESKSK+F+R+VLG  KDVSPLV+E+MFWKAA EKPIYVEYANDVPGSAFGES+
Sbjct: 140 YTIEQFESKSKTFSRSVLGTAKDVSPLVVESMFWKAASEKPIYVEYANDVPGSAFGESQ 198


>emb|CBI31438.3| unnamed protein product [Vitis vinifera]
          Length = 1550

 Score =  176 bits (445), Expect = 2e-42
 Identities = 85/113 (75%), Positives = 98/113 (86%), Gaps = 2/113 (1%)
 Frame = +3

Query: 12  VGNSPKSGAGDSGSDAVLRAVFTTRHQELGQSVKKPKGT--PLSGVHKQVWQSGEVYTLE 185
           V +S K G+GD  +D   RAVFTTRHQELGQ++K+ KG   P +GVHKQVWQSGE+YTLE
Sbjct: 119 VCSSAKMGSGDGDADGEARAVFTTRHQELGQNLKRTKGVVQPQAGVHKQVWQSGEIYTLE 178

Query: 186 QFESKSKSFARNVLGMVKDVSPLVIEAMFWKAALEKPIYVEYANDVPGSAFGE 344
           QFESKSK+FARN+LGM+K+VSPLV+EAMFWKAA EKPIYVEYANDVPGS FGE
Sbjct: 179 QFESKSKAFARNLLGMIKEVSPLVVEAMFWKAASEKPIYVEYANDVPGSGFGE 231


>ref|XP_002273747.1| PREDICTED: probable lysine-specific demethylase ELF6-like [Vitis
           vinifera]
          Length = 1415

 Score =  176 bits (445), Expect = 2e-42
 Identities = 85/113 (75%), Positives = 98/113 (86%), Gaps = 2/113 (1%)
 Frame = +3

Query: 12  VGNSPKSGAGDSGSDAVLRAVFTTRHQELGQSVKKPKGT--PLSGVHKQVWQSGEVYTLE 185
           V +S K G+GD  +D   RAVFTTRHQELGQ++K+ KG   P +GVHKQVWQSGE+YTLE
Sbjct: 83  VCSSAKMGSGDGDADGEARAVFTTRHQELGQNLKRTKGVVQPQAGVHKQVWQSGEIYTLE 142

Query: 186 QFESKSKSFARNVLGMVKDVSPLVIEAMFWKAALEKPIYVEYANDVPGSAFGE 344
           QFESKSK+FARN+LGM+K+VSPLV+EAMFWKAA EKPIYVEYANDVPGS FGE
Sbjct: 143 QFESKSKAFARNLLGMIKEVSPLVVEAMFWKAASEKPIYVEYANDVPGSGFGE 195


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