BLASTX nr result

ID: Glycyrrhiza24_contig00024087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024087
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553326.1| PREDICTED: RNA-binding protein 40-like [Glyc...   248   4e-64
ref|XP_003548764.1| PREDICTED: uncharacterized protein LOC100818...   248   5e-64
ref|XP_003624600.1| RNA-binding protein [Medicago truncatula] gi...   248   5e-64
ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Viti...   202   2e-50
emb|CAN75183.1| hypothetical protein VITISV_040912 [Vitis vinifera]   202   3e-50

>ref|XP_003553326.1| PREDICTED: RNA-binding protein 40-like [Glycine max]
          Length = 452

 Score =  248 bits (633), Expect = 4e-64
 Identities = 122/144 (84%), Positives = 131/144 (90%)
 Frame = +1

Query: 1   KKRARREAIVGPAIDKDVAHESVGLKPATLVPKEIPMIKKNPMLKIKIAPKATLNQHKDE 180
           +KRARRE IVGPAIDK VAHESVG+KPATLVPKEIP+IKKN +LKI I PKAT+ +HKD+
Sbjct: 266 QKRARRETIVGPAIDKGVAHESVGVKPATLVPKEIPVIKKNHVLKINIVPKATVKEHKDD 325

Query: 181 DTRQELQEAEKDTQDPNKFLTPDELEKGKLPPEEILSLPMFKNYTPGNPAPVLYIKNLAK 360
           DT QELQE EKD  DPNKFLTPDELE+GKLPPEEILSLPMFKNYT GNPAPVLYIKNLAK
Sbjct: 326 DTTQELQEPEKDVPDPNKFLTPDELERGKLPPEEILSLPMFKNYTAGNPAPVLYIKNLAK 385

Query: 361 DVIADDFYRIFGSFFGSIEAAKSG 432
           DVIADDFY IFGS FGSI+AAKSG
Sbjct: 386 DVIADDFYFIFGSLFGSIDAAKSG 409


>ref|XP_003548764.1| PREDICTED: uncharacterized protein LOC100818499 [Glycine max]
          Length = 456

 Score =  248 bits (632), Expect = 5e-64
 Identities = 122/144 (84%), Positives = 130/144 (90%)
 Frame = +1

Query: 1   KKRARREAIVGPAIDKDVAHESVGLKPATLVPKEIPMIKKNPMLKIKIAPKATLNQHKDE 180
           +KRARRE IVGPAIDK VAHESVG+KPATLVPKEIP+IKKN +LKI I PKAT+ +HKD+
Sbjct: 257 QKRARRETIVGPAIDKGVAHESVGVKPATLVPKEIPVIKKNHVLKINIVPKATVKEHKDD 316

Query: 181 DTRQELQEAEKDTQDPNKFLTPDELEKGKLPPEEILSLPMFKNYTPGNPAPVLYIKNLAK 360
           DT QELQE EKD  DPNKF TPDELE+GKLPPEEILSLPMFKNYT GNPAPVLYIKNLAK
Sbjct: 317 DTTQELQEPEKDVPDPNKFFTPDELERGKLPPEEILSLPMFKNYTAGNPAPVLYIKNLAK 376

Query: 361 DVIADDFYRIFGSFFGSIEAAKSG 432
           DVIADDFY IFGS FGSIEAAKSG
Sbjct: 377 DVIADDFYFIFGSLFGSIEAAKSG 400


>ref|XP_003624600.1| RNA-binding protein [Medicago truncatula]
           gi|355499615|gb|AES80818.1| RNA-binding protein
           [Medicago truncatula]
          Length = 492

 Score =  248 bits (632), Expect = 5e-64
 Identities = 122/144 (84%), Positives = 131/144 (90%)
 Frame = +1

Query: 1   KKRARREAIVGPAIDKDVAHESVGLKPATLVPKEIPMIKKNPMLKIKIAPKATLNQHKDE 180
           +KRARR AIVGPAIDKDVAHESVG+KPATL+PKEIPMIKKN +LKI IAPKATLN+HKD 
Sbjct: 260 RKRARRGAIVGPAIDKDVAHESVGVKPATLIPKEIPMIKKNLVLKINIAPKATLNEHKDN 319

Query: 181 DTRQELQEAEKDTQDPNKFLTPDELEKGKLPPEEILSLPMFKNYTPGNPAPVLYIKNLAK 360
            T  ELQE EKDT DPNKFLTPDELE+GKLPPEEILSLP FKNYTPGNPA VLYIKNLAK
Sbjct: 320 ATGIELQETEKDTLDPNKFLTPDELERGKLPPEEILSLPKFKNYTPGNPASVLYIKNLAK 379

Query: 361 DVIADDFYRIFGSFFGSIEAAKSG 432
           DV+ADDFY +FGSFFGS +AAKSG
Sbjct: 380 DVVADDFYLLFGSFFGSTDAAKSG 403


>ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Vitis vinifera]
           gi|298205172|emb|CBI17231.3| unnamed protein product
           [Vitis vinifera]
          Length = 463

 Score =  202 bits (514), Expect = 2e-50
 Identities = 102/146 (69%), Positives = 122/146 (83%), Gaps = 2/146 (1%)
 Frame = +1

Query: 1   KKRARREAIVGPAIDKDVAHESVGLKPATLVPKEIPMIKK-NPMLKIKIAPKATLNQHKD 177
           +KR +REAIVGP +DKDVAHE+VG+KPATLVPKEIPMIKK NP+L+IKI PK  + +HKD
Sbjct: 263 RKRVKREAIVGPGVDKDVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIVPKV-ITEHKD 321

Query: 178 E-DTRQELQEAEKDTQDPNKFLTPDELEKGKLPPEEILSLPMFKNYTPGNPAPVLYIKNL 354
           E    +E +++EK+  D   + T +EL+ GKLPPEEILSLPMFKNYT GNPAPVLYIKNL
Sbjct: 322 ECSIMKESEDSEKEDFDLKPYATLEELKSGKLPPEEILSLPMFKNYTAGNPAPVLYIKNL 381

Query: 355 AKDVIADDFYRIFGSFFGSIEAAKSG 432
           AKDV+ DDFY IFGS FGS++AAKSG
Sbjct: 382 AKDVVVDDFYFIFGSLFGSVDAAKSG 407


>emb|CAN75183.1| hypothetical protein VITISV_040912 [Vitis vinifera]
          Length = 562

 Score =  202 bits (513), Expect = 3e-50
 Identities = 102/146 (69%), Positives = 122/146 (83%), Gaps = 2/146 (1%)
 Frame = +1

Query: 1   KKRARREAIVGPAIDKDVAHESVGLKPATLVPKEIPMIKK-NPMLKIKIAPKATLNQHKD 177
           +KR +REAIVGP +DKDVAHE+VG+KPATLVPKEIPMIKK NP+L+IKI PK  + +HKD
Sbjct: 71  RKRVKREAIVGPGVDKDVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIXPKV-ITEHKD 129

Query: 178 E-DTRQELQEAEKDTQDPNKFLTPDELEKGKLPPEEILSLPMFKNYTPGNPAPVLYIKNL 354
           E    +E +++EK+  D   + T +EL+ GKLPPEEILSLPMFKNYT GNPAPVLYIKNL
Sbjct: 130 ECSIMKESEDSEKEDFDLKPYATLEELKSGKLPPEEILSLPMFKNYTAGNPAPVLYIKNL 189

Query: 355 AKDVIADDFYRIFGSFFGSIEAAKSG 432
           AKDV+ DDFY IFGS FGS++AAKSG
Sbjct: 190 AKDVVVDDFYFIFGSLFGSVDAAKSG 215


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