BLASTX nr result
ID: Glycyrrhiza24_contig00024080
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00024080 (311 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003535692.1| PREDICTED: uncharacterized protein LOC100806... 76 2e-12 ref|XP_003555283.1| PREDICTED: uncharacterized protein LOC100811... 72 4e-11 ref|XP_002869159.1| transducin family protein [Arabidopsis lyrat... 67 1e-09 ref|NP_195154.2| transducin/WD40 domain-containing protein [Arab... 67 2e-09 ref|XP_002300252.1| predicted protein [Populus trichocarpa] gi|2... 66 3e-09 >ref|XP_003535692.1| PREDICTED: uncharacterized protein LOC100806443 [Glycine max] Length = 804 Score = 76.3 bits (186), Expect = 2e-12 Identities = 35/48 (72%), Positives = 40/48 (83%) Frame = -1 Query: 146 MAVDIQTLEDRYIDCCRRHGVLPNTTILSSFFKAEVKKSRQELCLLDI 3 M +DI+TLEDRYID CRRH V PN++ILSS FKAEVKKS ELC L+I Sbjct: 1 MVIDIETLEDRYIDSCRRHDVFPNSSILSSLFKAEVKKSNHELCSLEI 48 >ref|XP_003555283.1| PREDICTED: uncharacterized protein LOC100811988 [Glycine max] Length = 787 Score = 72.4 bits (176), Expect = 4e-11 Identities = 33/48 (68%), Positives = 40/48 (83%) Frame = -1 Query: 146 MAVDIQTLEDRYIDCCRRHGVLPNTTILSSFFKAEVKKSRQELCLLDI 3 M +DI++LEDRYID CRRH VLPN++ILSS FKAEVKKS E C ++I Sbjct: 1 MVIDIESLEDRYIDFCRRHDVLPNSSILSSLFKAEVKKSNHEPCSMEI 48 >ref|XP_002869159.1| transducin family protein [Arabidopsis lyrata subsp. lyrata] gi|297314995|gb|EFH45418.1| transducin family protein [Arabidopsis lyrata subsp. lyrata] Length = 785 Score = 67.4 bits (163), Expect = 1e-09 Identities = 26/50 (52%), Positives = 42/50 (84%) Frame = -1 Query: 152 IAMAVDIQTLEDRYIDCCRRHGVLPNTTILSSFFKAEVKKSRQELCLLDI 3 +A +I TLE++YI+ C++HG+LPNT +LS+FF+AEVKKSR + C++++ Sbjct: 1 MATLTEIATLEEKYIELCKKHGILPNTAVLSAFFEAEVKKSRNQRCIMNL 50 >ref|NP_195154.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana] gi|26449713|dbj|BAC41980.1| unknown protein [Arabidopsis thaliana] gi|29029034|gb|AAO64896.1| At4g34280 [Arabidopsis thaliana] gi|332660954|gb|AEE86354.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] Length = 783 Score = 66.6 bits (161), Expect = 2e-09 Identities = 27/50 (54%), Positives = 41/50 (82%) Frame = -1 Query: 152 IAMAVDIQTLEDRYIDCCRRHGVLPNTTILSSFFKAEVKKSRQELCLLDI 3 +A +I TLE++YI+ C+ HG+LPNT ILS+FF+AEVKKSR + C++++ Sbjct: 1 MATLTEIATLEEKYIELCKMHGILPNTAILSAFFEAEVKKSRNQRCIMNL 50 >ref|XP_002300252.1| predicted protein [Populus trichocarpa] gi|222847510|gb|EEE85057.1| predicted protein [Populus trichocarpa] Length = 817 Score = 66.2 bits (160), Expect = 3e-09 Identities = 31/45 (68%), Positives = 35/45 (77%) Frame = -1 Query: 137 DIQTLEDRYIDCCRRHGVLPNTTILSSFFKAEVKKSRQELCLLDI 3 +I TLE YID C+RHGVLPNT ILS F KAEVKKS E+C L+I Sbjct: 9 NISTLEQMYIDSCKRHGVLPNTEILSGFLKAEVKKSCNEICSLEI 53