BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024077
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal doma...   127   9e-28
ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal doma...   122   3e-26
gb|AFK41018.1| unknown [Medicago truncatula]                           99   4e-19
ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal doma...    91   7e-17
emb|CAN60776.1| hypothetical protein VITISV_018840 [Vitis vinifera]    86   3e-15

>ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Glycine max]
          Length = 442

 Score =  127 bits (319), Expect = 9e-28
 Identities = 69/108 (63%), Positives = 81/108 (75%), Gaps = 1/108 (0%)
 Frame = -2

Query: 323 MSVVTDSPVHSSSSDDFVAFLDSALDASSPGSLSDDKDVEKQDELESPRIKRRKFENIXX 144
           MSVVTDSPVHSSSSDDF+AFLD+ LDASSP S  D + V++ DEL+S R KRRKFE+I  
Sbjct: 1   MSVVTDSPVHSSSSDDFIAFLDAELDASSPDSSPDKEVVKQDDELQSVRTKRRKFESIEE 60

Query: 143 XXXXXXXXXXEQKLVAAESSVKVDV-CTHPGSFGDMCIRCGQKLDGES 3
                     ++ L   E+S +VDV CTHPGSFG+MCIRCGQKLDGES
Sbjct: 61  TEGSTSEGIVKRSL---EASSEVDVCCTHPGSFGNMCIRCGQKLDGES 105


>ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Glycine max]
          Length = 428

 Score =  122 bits (306), Expect = 3e-26
 Identities = 72/109 (66%), Positives = 77/109 (70%), Gaps = 2/109 (1%)
 Frame = -2

Query: 323 MSVVTDSPVHSSSSDDFVAFLDSALDASSPGSLSDDKDVEKQ--DELESPRIKRRKFENI 150
           MSVVTDSPVHSSSSDDF+AFLD+ LDASSP S S DK+VEKQ  DELES  IKRRKFE+I
Sbjct: 1   MSVVTDSPVHSSSSDDFIAFLDAELDASSPDS-SPDKEVEKQDDDELES-GIKRRKFESI 58

Query: 149 XXXXXXXXXXXXEQKLVAAESSVKVDVCTHPGSFGDMCIRCGQKLDGES 3
                              E S    VCTHPGSFG+MCIRCGQKLDGES
Sbjct: 59  E----------------ETEGSTSEGVCTHPGSFGNMCIRCGQKLDGES 91


>gb|AFK41018.1| unknown [Medicago truncatula]
          Length = 124

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 54/108 (50%), Positives = 59/108 (54%)
 Frame = +1

Query: 1   PDSPSNFCPHRIHMSPNEPGCVHTSTFTDDSAATNFCXXXXXXXXXXXXXIFXXXXXXXX 180
           PDSPSNFCP RIH+SPNEPGCVHTSTFTDDSA T+ C             +         
Sbjct: 7   PDSPSNFCPQRIHISPNEPGCVHTSTFTDDSATTSLCSMIPSEVDPSVSSVLSNLRLLFL 66

Query: 181 XXXXXXXXXXXXXXDNEPGELASSAESRNATKSSLLDECTGESVTTLI 324
                         D E GELAS A  R   KSSL +EC GESVTTL+
Sbjct: 67  TSSNSSWVSASSSAD-ESGELASRASLRYEMKSSLPEECAGESVTTLM 113


>ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Cucumis sativus]
          Length = 452

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 54/107 (50%), Positives = 65/107 (60%)
 Frame = -2

Query: 323 MSVVTDSPVHSSSSDDFVAFLDSALDASSPGSLSDDKDVEKQDELESPRIKRRKFENIXX 144
           MS+ T+SP HSSSSDDF AFL   LD+ S  S S D++ E  +  ES RIKRRK E +  
Sbjct: 1   MSLATNSPAHSSSSDDFAAFLAVDLDSHSSDS-SPDEETEGDNNAESVRIKRRKVEKLEN 59

Query: 143 XXXXXXXXXXEQKLVAAESSVKVDVCTHPGSFGDMCIRCGQKLDGES 3
                     EQ L   E   K  +C+HPGSFG+MCI CGQ+LD ES
Sbjct: 60  SEEDIMHEVEEQSL---EVLSKQQLCSHPGSFGNMCIICGQRLDEES 103


>emb|CAN60776.1| hypothetical protein VITISV_018840 [Vitis vinifera]
          Length = 398

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 52/117 (44%), Positives = 71/117 (60%), Gaps = 9/117 (7%)
 Frame = -2

Query: 326 QMSVVTDSPVHSSSSDDFVAFLDSALDASS----PGSLSDDKDVEKQDELESP--RIKRR 165
           +MS+VTDS VHS SSD F A+LD+ LD+ S    P   ++D + E +DE +S   R+KR+
Sbjct: 168 EMSLVTDSRVHSPSSDGFAAYLDAELDSDSSDVSPEQEAEDDEQEAEDESDSEYKRVKRQ 227

Query: 164 K---FENIXXXXXXXXXXXXEQKLVAAESSVKVDVCTHPGSFGDMCIRCGQKLDGES 3
           K   FE+I            EQ L   E ++  D CTHPG F ++CIRCGQK++G S
Sbjct: 228 KVEEFESIEEHPGSTSDGSLEQNL---EVTITKDTCTHPGVFRELCIRCGQKMEGGS 281