BLASTX nr result

ID: Glycyrrhiza24_contig00024071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024071
         (774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [...   326   3e-87
ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containin...   323   3e-86
ref|XP_003541728.1| PREDICTED: zinc finger CCCH domain-containin...   315   5e-84
ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|2...    90   5e-16
emb|CBI30597.3| unnamed protein product [Vitis vinifera]               87   5e-15

>ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355482671|gb|AES63874.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 892

 Score =  326 bits (836), Expect = 3e-87
 Identities = 176/258 (68%), Positives = 200/258 (77%)
 Frame = +1

Query: 1    QEENLGPVSSGVEKPEVMQPSHYMEENDAMPKASVPLSETLTLKKEEFHSEQEISSHPKS 180
            +EENLG VS   + PEV++PSHYMEENDAM KASV L E LTLK E++  +Q++ S PK 
Sbjct: 268  KEENLGSVSHVPDNPEVIRPSHYMEENDAMSKASVSLHEELTLKNEDYPLKQKVESPPKP 327

Query: 181  RENLISAEDGKSQGLDVDVENAGSLLQGKTFGGFSGTGCNSKASLSDVKDIDSRATKSSS 360
             ENLISAEDGK+QGL+VDVEN G L Q K   G S   CNSKASLSDV DIDSRATK SS
Sbjct: 328  SENLISAEDGKNQGLNVDVENPGHL-QRKASEGCSEPDCNSKASLSDVMDIDSRATKPSS 386

Query: 361  DMGKDVVTGLLPRDCFVEDADGGQHSKNEIMRSEMESRVELKQMKXXXXXXXXXXAEIKD 540
            D GKDVVTG++ RD FVEDADG Q+SK ++M+SEMES V++KQ K          AEIKD
Sbjct: 387  DTGKDVVTGIILRDNFVEDADGDQNSKEKVMQSEMESTVDVKQ-KPSRTRIHSPSAEIKD 445

Query: 541  GKKRPAIICDFFAKGWCIRGSSCSFLHIKDTGNNTDQEAEGDLVTAYQKRELKLEEGVKE 720
            G KRPAIIC FFAKGWCIRGSSCSFLH+KD+ NNTDQ AEGD+VTA+QKRELKLE+GVKE
Sbjct: 446  GNKRPAIICAFFAKGWCIRGSSCSFLHVKDSVNNTDQGAEGDVVTAHQKRELKLEKGVKE 505

Query: 721  NVERSRTNEEEASPSRHP 774
                   NEEEASPS HP
Sbjct: 506  -------NEEEASPSWHP 516


>ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
           [Glycine max]
          Length = 713

 Score =  323 bits (828), Expect = 3e-86
 Identities = 176/262 (67%), Positives = 201/262 (76%), Gaps = 4/262 (1%)
 Frame = +1

Query: 1   QEENLGPVSSGVEKPEVMQPS--HYMEENDAMPKASVPLSETLTLKKEEFHSEQEISSHP 174
           Q++NLGPVSS  E PEVM PS  H MEEN+ M K S    +  TLKKEE   + EISSHP
Sbjct: 42  QDKNLGPVSSVAENPEVMPPSSTHCMEENNVMLKKS----DIPTLKKEELPLKYEISSHP 97

Query: 175 KSRENLISAEDGKSQGLDVDVENAGSLLQGKTFGGFSGTGCNSKASLSDVKDIDSRA--T 348
           KSRENL S E  +SQGLDV+VENAGSLLQ KTF G+   GCNSKA+L    +IDSRA  T
Sbjct: 98  KSRENLTSVEVCRSQGLDVEVENAGSLLQKKTFRGYCVPGCNSKANLCGDNNIDSRARAT 157

Query: 349 KSSSDMGKDVVTGLLPRDCFVEDADGGQHSKNEIMRSEMESRVELKQMKXXXXXXXXXXA 528
           KSSSD  +D+V G LPRDC VED++GGQ+S+N+IM SEMESR + KQM           A
Sbjct: 158 KSSSDTVQDMVIGPLPRDCLVEDSNGGQNSRNKIMLSEMESRDDAKQMTSRTRNLSPS-A 216

Query: 529 EIKDGKKRPAIICDFFAKGWCIRGSSCSFLHIKDTGNNTDQEAEGDLVTAYQKRELKLEE 708
           EIKDG KRP IICDFFAKGWCIRGSSCSFLHIKDTG+NTDQEAE D V+ YQKR+LK+EE
Sbjct: 217 EIKDGNKRPRIICDFFAKGWCIRGSSCSFLHIKDTGDNTDQEAEADSVSTYQKRQLKVEE 276

Query: 709 GVKENVERSRTNEEEASPSRHP 774
           GV+ENVERSR NE+EA+PS HP
Sbjct: 277 GVRENVERSRMNEQEATPSWHP 298


>ref|XP_003541728.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
           [Glycine max]
          Length = 521

 Score =  315 bits (808), Expect = 5e-84
 Identities = 171/262 (65%), Positives = 200/262 (76%), Gaps = 4/262 (1%)
 Frame = +1

Query: 1   QEENLGPVSSGVEKPEVMQPS--HYMEENDAMPKASVPLSETLTLKKEEFHSEQEISSHP 174
           Q++ LGPVSS  E PEVM PS  H +EENDAM K S    E  TL+K+E   + E SSHP
Sbjct: 34  QDKILGPVSSVAENPEVMPPSSMHCLEENDAMLKKS----EIPTLEKDELPLKYEFSSHP 89

Query: 175 KSRENLISAEDGKSQGLDVDVENAGSLLQGKTFGGFSGTGCNSKASLSDVKDIDSRA--T 348
           KSRENL S ED +SQ  DV+VENAGSLLQ +TFGG+S  GCNSKA+L    +IDSRA  T
Sbjct: 90  KSRENLTSVEDYRSQVFDVEVENAGSLLQNETFGGYSEPGCNSKANLCGDNNIDSRARAT 149

Query: 349 KSSSDMGKDVVTGLLPRDCFVEDADGGQHSKNEIMRSEMESRVELKQMKXXXXXXXXXXA 528
           KSSSD  +D+V G LPRDC VED++GGQ+S+ +IM+SE+ESR  +KQM           A
Sbjct: 150 KSSSDTVQDMVIGPLPRDCLVEDSNGGQNSRIKIMQSEIESRDNVKQMTSRTRSLSPG-A 208

Query: 529 EIKDGKKRPAIICDFFAKGWCIRGSSCSFLHIKDTGNNTDQEAEGDLVTAYQKRELKLEE 708
           EIKDG KRP IICDFFAKGWCIRGSSCSFLHIKDTG N DQEAE DLVT +QKR+LK+EE
Sbjct: 209 EIKDGNKRPRIICDFFAKGWCIRGSSCSFLHIKDTGANIDQEAEADLVTTHQKRQLKVEE 268

Query: 709 GVKENVERSRTNEEEASPSRHP 774
           GV+ENVERSR N++EA+PS HP
Sbjct: 269 GVRENVERSRMNQQEATPSWHP 290


>ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|222870892|gb|EEF08023.1|
           predicted protein [Populus trichocarpa]
          Length = 669

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 73/233 (31%), Positives = 108/233 (46%), Gaps = 10/233 (4%)
 Frame = +1

Query: 61  SHYMEENDAMPKASVPLSETLTLKKEEFHSEQEISSHPKSRENLISAEDGKSQGLDVDVE 240
           S   E++ +  K S PL   LTL+KE+       S  PK  ++L+ A+  K+  L+  + 
Sbjct: 10  SELREDSVSNFKCSGPLDGPLTLQKEKSCVNYLDSWSPKLSKHLVIAQ--KNGPLEHAIN 67

Query: 241 NAGSLLQGKTFGGFSGTGCNSKASLSDVKD-IDSRATKSSSDMGKDVVTGLLPRDCFVED 417
              +               NSK  LS+  + I    T+     G +V   L  R+C  ++
Sbjct: 68  KTDAFR-------------NSKTHLSNSSEAIAVETTEPFVITGIEVDVVLSKRNCLGQE 114

Query: 418 ADGGQHSKNEIM---------RSEMESRVELKQMKXXXXXXXXXXAEIKDGKKRPAIICD 570
           A+    SK E+          + + ESR+                 E++DG KR A+ICD
Sbjct: 115 ANVVLDSKEELKPVDVKSEDSKEQTESRISRLVASGTRARSLSPSTELRDGNKRAAVICD 174

Query: 571 FFAKGWCIRGSSCSFLHIKDTGNNTDQEAEGDLVTAYQKRELKLEEGVKENVE 729
           FFAKGWCIRGSSC FLH  +  +NT Q+   D V     RE + +EGV+  +E
Sbjct: 175 FFAKGWCIRGSSCRFLHTTNKADNTGQQLGVDEVAT---REDQFDEGVRNILE 224


>emb|CBI30597.3| unnamed protein product [Vitis vinifera]
          Length = 745

 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 5/140 (3%)
 Frame = +1

Query: 331 IDSRATKSSSDMGKDVVTGLLPRDCFVEDADGGQHSKNEIMRSEMESRVELKQMKXXXXX 510
           +D+R TK  S  GK     +  RD F E+A+  Q S  EI + + +S  E+ Q       
Sbjct: 151 MDARNTKPFSVPGKGAAVVIPMRDVFGEEANIVQCSNKEIKQIDFQSPEEMNQRASRLAA 210

Query: 511 XXXXXAEI-----KDGKKRPAIICDFFAKGWCIRGSSCSFLHIKDTGNNTDQEAEGDLVT 675
                  +     KD  KRPAIIC +F++GWC+ G +C F+H  D+ +NT+Q+  GD+  
Sbjct: 211 SLLRRRSLSPTDSKDENKRPAIICQYFSQGWCVNGPNCKFMHNIDSMDNTNQQIGGDVAI 270

Query: 676 AYQKRELKLEEGVKENVERS 735
           A ++ E + ++G+ E  ER+
Sbjct: 271 ATRRYESQADKGLSEIPERT 290


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