BLASTX nr result

ID: Glycyrrhiza24_contig00024058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024058
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550458.1| PREDICTED: uncharacterized protein LOC100791...   342   3e-92
ref|XP_003528725.1| PREDICTED: uncharacterized protein LOC100814...   336   2e-90
ref|XP_004133740.1| PREDICTED: uncharacterized protein LOC101212...   221   1e-55
ref|XP_002519367.1| replication factor C / DNA polymerase III ga...   213   3e-53
ref|XP_002303217.1| predicted protein [Populus trichocarpa] gi|2...   200   2e-49

>ref|XP_003550458.1| PREDICTED: uncharacterized protein LOC100791561 [Glycine max]
          Length = 1236

 Score =  342 bits (878), Expect = 3e-92
 Identities = 172/220 (78%), Positives = 188/220 (85%), Gaps = 3/220 (1%)
 Frame = +2

Query: 2    STGAIEKEQRRGHMNGTGSYSSLPPLPDANLQSATASSDILAEGNGARERRQDNPMQRIE 181
            ST A EKEQR+ HMNGT SYSS PPL D NLQS  ASSDILAEGNG RERRQDNPMQRIE
Sbjct: 1011 STVAGEKEQRKSHMNGTESYSSFPPLLDGNLQSTAASSDILAEGNGVRERRQDNPMQRIE 1070

Query: 182  SIIREQRLETAWLQAVEKGSPGSLGRLRPEKNQVLPQDGI--VESLDSTRFSSHQHWEDE 355
            SIIREQRLETAWLQAVEKGSPGSL RLRPEKNQVLPQ+G+  +ES+DSTRF SHQHWED+
Sbjct: 1071 SIIREQRLETAWLQAVEKGSPGSLSRLRPEKNQVLPQNGVDPIESMDSTRFPSHQHWEDD 1130

Query: 356  PKSDLKVLSVKNGRVLQKDQIGKRADRYPMSPSLLHDTSLATMSGKDNLGYESSSGPGGC 535
            P  ++KVLS+KNGR+ QKDQIG++ DR+PMSPSLLHD SLAT+SGKDNLGYES SG GGC
Sbjct: 1131 PNDEVKVLSLKNGRIPQKDQIGRKTDRFPMSPSLLHDNSLATISGKDNLGYESGSGAGGC 1190

Query: 536  GFLCWNNNSKTRRVIKVK-GTPVGARKPGRLTLFGECGKP 652
            GFLCW N SK RRVIKVK GTPV A +    TLFG+C KP
Sbjct: 1191 GFLCW-NKSKPRRVIKVKGGTPVRAGRAATFTLFGDCTKP 1229


>ref|XP_003528725.1| PREDICTED: uncharacterized protein LOC100814391 [Glycine max]
          Length = 1237

 Score =  336 bits (862), Expect = 2e-90
 Identities = 171/221 (77%), Positives = 189/221 (85%), Gaps = 3/221 (1%)
 Frame = +2

Query: 2    STGAIEKEQRRGHMNGTGSYSSLPPLPDANLQSATASSDILAEGNGARERRQDNPMQRIE 181
            ST A EKE+R+GHMN T SYSS PPL D NLQS  ASSDILAEGNG +ERRQDNPMQRIE
Sbjct: 1012 STVAGEKEERKGHMNRTESYSSFPPLLDGNLQSTNASSDILAEGNGVKERRQDNPMQRIE 1071

Query: 182  SIIREQRLETAWLQAVEKGSPGSLGRLRPEKNQVLPQDGI--VESLDSTRFSSHQHWEDE 355
            SIIREQRLETAWLQAVEKGSPGSL RLRPE+NQVL Q+ +  +ES+DSTRF SHQHWEDE
Sbjct: 1072 SIIREQRLETAWLQAVEKGSPGSLSRLRPEENQVLLQNAVDPMESMDSTRFPSHQHWEDE 1131

Query: 356  PKSDLKVLSVKNGRVLQKDQIGKRADRYPMSPSLLHDTSLATMSGKDNLGYESSSGPGGC 535
              +++KVLS+KNGRV QKDQIG++ADRYPMSPSLLHD SLAT+SGKDNLGYES SG GGC
Sbjct: 1132 LNNEVKVLSLKNGRVPQKDQIGRKADRYPMSPSLLHDNSLATISGKDNLGYESGSGAGGC 1191

Query: 536  GFLCWNNNSKTRRVIKVK-GTPVGARKPGRLTLFGECGKPK 655
            GFLCW N SK RRV+KVK GTPV AR+    TLFG+C KPK
Sbjct: 1192 GFLCW-NKSKPRRVVKVKGGTPVRARRAATFTLFGDCTKPK 1231


>ref|XP_004133740.1| PREDICTED: uncharacterized protein LOC101212356 [Cucumis sativus]
            gi|449478091|ref|XP_004155220.1| PREDICTED:
            uncharacterized protein LOC101227259 [Cucumis sativus]
          Length = 1267

 Score =  221 bits (562), Expect = 1e-55
 Identities = 122/223 (54%), Positives = 156/223 (69%), Gaps = 10/223 (4%)
 Frame = +2

Query: 17   EKEQRRGHMNGTGSYSSLPPLPDANLQSATASSDILAEGN----GARERRQDNPMQRIES 184
            +KE+R  ++N    YS+   + DA  QS + SS +  E N    G+R+RRQ+ PMQRIES
Sbjct: 1037 DKERRTSNLNAMEGYSNRSLMLDATYQSTSDSSQLPTESNHQNDGSRDRRQEIPMQRIES 1096

Query: 185  IIREQRLETAWLQAVEKGSPGSLGRLRPEKNQVLPQDGI-----VESLDSTRFSSHQHWE 349
            IIREQRLETAWLQA+EKG+PGSL RL+PEKNQVLPQDG      ++ ++ST  SS + WE
Sbjct: 1097 IIREQRLETAWLQAMEKGTPGSLSRLKPEKNQVLPQDGSYYKDQMDEMNSTEDSSRK-WE 1155

Query: 350  DEPKSDLKVLSVKNGRVLQKDQIGKRADRYPMSPSLLHDTSLATMSGKDNLGYESSSGPG 529
            DE   +LKVL V +  + QK+Q+G+RADRY +SPS+LHD S+   S KDNLGYESSS  G
Sbjct: 1156 DELNRELKVLKVGDDILAQKEQVGRRADRYAISPSILHDGSMVGNSNKDNLGYESSSAAG 1215

Query: 530  GC-GFLCWNNNSKTRRVIKVKGTPVGARKPGRLTLFGECGKPK 655
            GC G  CW N+SK  +  KV+   V +R  GR +LFGECGK +
Sbjct: 1216 GCSGLFCW-NSSKPHKRAKVRANHVRSRN-GRFSLFGECGKSR 1256


>ref|XP_002519367.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223541434|gb|EEF42984.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 1270

 Score =  213 bits (542), Expect = 3e-53
 Identities = 121/213 (56%), Positives = 143/213 (67%), Gaps = 10/213 (4%)
 Frame = +2

Query: 47   GTGSYSSLPPLPDANLQSATASSDILAEGN----GARERRQDNPMQRIESIIREQRLETA 214
            G+G Y     L D++ QS + S+++L E N    G +E  Q+ PMQRIESIIREQRLETA
Sbjct: 1055 GSGDYLKSLTLLDSSFQSTSLSAELLPEANTESDGVKETGQELPMQRIESIIREQRLETA 1114

Query: 215  WLQAVEKGSPGSLGRLRPEKNQVLPQDGI----VESLDSTRFSSHQHWEDEPKSDLKVLS 382
            WLQA EKG+PGSL RL+PEKNQVLPQ+      +ES  S   SS QHWE E   +LKVL 
Sbjct: 1115 WLQAAEKGTPGSLSRLKPEKNQVLPQEDCQQNQMESASSMALSS-QHWEHELNDELKVLK 1173

Query: 383  VKNGRVLQKDQIGKRADRYPMSPSLLHDTSLATMSGKDNLGYESSSGPGGC-GFLCWNNN 559
            ++  RVL KDQIGKRAD YP+SPSLLH ++      K++LGYESSS  GGC G  CWN N
Sbjct: 1174 MEERRVLHKDQIGKRADHYPISPSLLHGSNFVGNLNKESLGYESSSAGGGCSGLFCWNAN 1233

Query: 560  SKTRRVIKVKGTPVGAR-KPGRLTLFGECGKPK 655
                   KV GTPV  R K GR +LFGECGK K
Sbjct: 1234 KSH----KVNGTPVRYRGKGGRFSLFGECGKHK 1262


>ref|XP_002303217.1| predicted protein [Populus trichocarpa] gi|222840649|gb|EEE78196.1|
            predicted protein [Populus trichocarpa]
          Length = 1241

 Score =  200 bits (509), Expect = 2e-49
 Identities = 115/217 (52%), Positives = 140/217 (64%), Gaps = 7/217 (3%)
 Frame = +2

Query: 26   QRRGHMNGTGSYSSLPPLPDANLQSATASSDILAEGNGARERRQDNPMQRIESIIREQRL 205
            +R G  N +G+      L ++  +SA  S     + N     +Q+ PMQRIESIIREQRL
Sbjct: 1023 ERGGKANWSGAVVGYSDL-ESQEESAKLSRGSFNDANAGE--KQEMPMQRIESIIREQRL 1079

Query: 206  ETAWLQAVEKGSPGSLGRLRPEKNQVLPQDGI-----VESLDSTRFSSHQHWEDEPKSDL 370
            ETAWLQ  EKG+PGSL  L+PEKNQVLPQ+       +ES+DS   SS Q WEDE   +L
Sbjct: 1080 ETAWLQVAEKGTPGSLSHLKPEKNQVLPQEDTYQQNQMESIDSATLSS-QKWEDELNHEL 1138

Query: 371  KVLSVKNGRVLQKDQIGKRADRYPMSPSLLHDTSLATMSGKDNLGYESSSGPGGC-GFLC 547
            KVL +++ RVL+KDQIGK  D YPMSPSLLH +S      K++LGYESSS  GGC G  C
Sbjct: 1139 KVLKMQDQRVLRKDQIGKMVDYYPMSPSLLHGSSYVANGSKESLGYESSSAGGGCSGLFC 1198

Query: 548  WNNNSKTRRVIKVKGTPVGAR-KPGRLTLFGECGKPK 655
            WNN+   R   K K TPVG R + GR +LFGEC K K
Sbjct: 1199 WNNSRSNR--AKAKATPVGPRGRSGRFSLFGECAKQK 1233


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