BLASTX nr result

ID: Glycyrrhiza24_contig00024050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024050
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527836.1| PREDICTED: putative RING-H2 finger protein A...   159   2e-37
ref|XP_003545611.1| PREDICTED: putative RING-H2 finger protein A...   135   4e-30
ref|XP_002308607.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    94   1e-17
ref|XP_002516536.1| ring finger protein, putative [Ricinus commu...    91   1e-16

>ref|XP_003527836.1| PREDICTED: putative RING-H2 finger protein ATL12-like [Glycine max]
          Length = 390

 Score =  159 bits (403), Expect = 2e-37
 Identities = 93/150 (62%), Positives = 104/150 (69%), Gaps = 4/150 (2%)
 Frame = -2

Query: 534 NHRIVISDVVTRSRWXXXXXXXXXXXNCEMLNDMCSNRFS--PLESTKGE-NFGGISSLP 364
           NH+IVIS+V TRSRW           N EMLND+CS RF   PLES+    NF GISS  
Sbjct: 253 NHKIVISNVFTRSRWSDLNASDLLSLNSEMLNDVCSGRFCLCPLESSDDSGNFHGISS-- 310

Query: 363 STSLSNDEEENSFTALN-PAEKRSMSEIANFPRFAEISRRNRIRECGGDNGSEERLWRIW 187
                ++EEENSFTALN PAEKR MSE     RF +  + NRIREC   NG+ ERLW++W
Sbjct: 311 -----SNEEENSFTALNSPAEKRCMSE-----RFTQKGKENRIRECVTSNGASERLWKVW 360

Query: 186 LPIARRTVQWFARQERNSVELEHKPLASNV 97
           LPIARRTVQWFA QERNSVELEHK LASNV
Sbjct: 361 LPIARRTVQWFAIQERNSVELEHKTLASNV 390


>ref|XP_003545611.1| PREDICTED: putative RING-H2 finger protein ATL12-like [Glycine max]
          Length = 395

 Score =  135 bits (340), Expect = 4e-30
 Identities = 84/149 (56%), Positives = 93/149 (62%), Gaps = 3/149 (2%)
 Frame = -2

Query: 534 NHRIVISDVVTRSRWXXXXXXXXXXXNCEMLNDMCSNRFSPLESTKGENFGGISSLPSTS 355
           NH+IV+SDVVTRSRW           N EML DM S RFSP      E   G SSLP   
Sbjct: 254 NHKIVVSDVVTRSRWSDLNSSDMLSLNSEMLLDMSSRRFSP----SNEMIRGDSSLPF-- 307

Query: 354 LSNDEEENSFTALNPAEKRSMSEIANFPRFAEISRRNRIRE---CGGDNGSEERLWRIWL 184
           + ND+E +SFT LN AEKRSMSEIA  PRF E  ++NR        G N  EERL RIWL
Sbjct: 308 IFNDDE-SSFTLLNTAEKRSMSEIARVPRFIETCKQNRTEAGVASSGSNEREERLRRIWL 366

Query: 183 PIARRTVQWFARQERNSVELEHKPLASNV 97
            IA+RTVQWF  QERNS EL+HK L  NV
Sbjct: 367 GIAQRTVQWFVGQERNSRELKHKNLTPNV 395


>ref|XP_002308607.1| predicted protein [Populus trichocarpa] gi|222854583|gb|EEE92130.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  116 bits (291), Expect = 2e-24
 Identities = 68/170 (40%), Positives = 94/170 (55%), Gaps = 25/170 (14%)
 Frame = -2

Query: 531 HRIVISDVVTRSRWXXXXXXXXXXXNCEMLNDMCSNRFSPLESTKGENFGGISSLPSTSL 352
           H+I+ISDV+ +SRW           N EML  M SNRF+PL+S+    + G+S + +   
Sbjct: 243 HKIIISDVLIKSRWSDANSSDFLSLNTEMLGVMSSNRFTPLKSSSARFYNGLSRVENLEK 302

Query: 351 SNDEEE-----------------------NSFTALNPAEKRSMSEIANFPRFAEISRRNR 241
             D+ E                       NS   LNP  KRS SEI  F RF ++S +N+
Sbjct: 303 VKDDTERKRLSKPQFPTVDRSNSVPSSSLNSSKMLNPVGKRSTSEITIFSRFRQLSAKNK 362

Query: 240 IRECG--GDNGSEERLWRIWLPIARRTVQWFARQERNSVELEHKPLASNV 97
           ++E    G+ G +ER+  +WLPIARRTVQWFA +ERN  +LE++  ASNV
Sbjct: 363 MKESASLGNGGKDERIRMLWLPIARRTVQWFAGRERNLRQLEYERQASNV 412


>ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42 [Vitis vinifera]
          Length = 423

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 60/166 (36%), Positives = 83/166 (50%), Gaps = 35/166 (21%)
 Frame = -2

Query: 534 NHRIVISDVVTRSRWXXXXXXXXXXXNCEMLNDMCSNRFSPLESTKG------------- 394
           NH+I++SDVV ++RW           N E+++ M S+RF+ L+S                
Sbjct: 244 NHKIIVSDVVLKNRWSSVSSSDLMYLNSELVHAMSSDRFASLDSNNSAMGRPIEDWEVMK 303

Query: 393 --------------------ENFGGISSLPSTSLSNDEEENSFTALNPAEKRSMSEIANF 274
                                N    S LPSTS +     ++   L+P EKRSMSEI   
Sbjct: 304 IKEEIERKRIFESRVSRINHSNPVSSSGLPSTSKTEANSGHASRFLHPTEKRSMSEITAC 363

Query: 273 PRFAEISRRNRIRE--CGGDNGSEERLWRIWLPIARRTVQWFARQE 142
            R+A+ S +NRIRE     +N  EER+ R+WLPIARRTV+WFA +E
Sbjct: 364 SRYADFSTKNRIRESSLAQNNIKEERMRRLWLPIARRTVEWFANRE 409


>ref|XP_002516536.1| ring finger protein, putative [Ricinus communis]
           gi|223544356|gb|EEF45877.1| ring finger protein,
           putative [Ricinus communis]
          Length = 407

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 61/174 (35%), Positives = 86/174 (49%), Gaps = 40/174 (22%)
 Frame = -2

Query: 531 HRIVISDVVTRSRWXXXXXXXXXXXNCEMLNDMCSNRFSPLESTKGENFGGIS------- 373
           H+I++SDV+ ++RW           + EMLN M SN FS  +ST G ++  +S       
Sbjct: 234 HKIIVSDVIIKNRWSDFNSSDLLSMSSEMLNVMSSNMFSHSDSTNGRSYNNLSMNEHIEK 293

Query: 372 --------SLPSTSLSNDEEENSFTA----------------LNPAEKRSMSEIANFPRF 265
                    L  + L+  E  +SF+A                +NP EKRS+SEI    RF
Sbjct: 294 IKEDIERKRLCESKLTKAEGSDSFSASCFPSTSYKGESSLKMINPGEKRSISEITVCSRF 353

Query: 264 AEISRRNRIRECGGDNGS--EERLWRIWLPIARRTVQWFA-------RQERNSV 130
              S +N+IRE      S  E+R  R+W PIA+RTVQWFA       R++R+SV
Sbjct: 354 NGSSLKNKIRESASPRSSEREDRTRRLWFPIAQRTVQWFADGQELECRRQRSSV 407


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