BLASTX nr result

ID: Glycyrrhiza24_contig00024034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024034
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542330.1| PREDICTED: zinc finger CCCH domain-containin...   273   1e-71
ref|XP_003550631.1| PREDICTED: zinc finger CCCH domain-containin...   270   1e-70
ref|XP_002332828.1| predicted protein [Populus trichocarpa] gi|2...   256   1e-66
ref|XP_002514115.1| nucleic acid binding protein, putative [Rici...   251   3e-65
ref|XP_002279554.2| PREDICTED: zinc finger CCCH domain-containin...   250   1e-64

>ref|XP_003542330.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
           [Glycine max]
          Length = 601

 Score =  273 bits (698), Expect = 1e-71
 Identities = 130/152 (85%), Positives = 140/152 (92%)
 Frame = -3

Query: 457 PRILLCGDVLGRLNQLFKRVSSVNKSAGPFDALLCVGQFFPDSPEQVDEFMSYIEGGSHI 278
           PRILLCGDVLGRLNQLFKRVSSVNKSAGPFDALLCVGQFFPDSPEQ+++F  YIEGGSH 
Sbjct: 3   PRILLCGDVLGRLNQLFKRVSSVNKSAGPFDALLCVGQFFPDSPEQLEDFTKYIEGGSHF 62

Query: 277 PLPTYFIGDYGVAAPKILSAASKDPANRGFKMDGFRVCDNLYWLKGSGKFHLLGLSVAYL 98
           PLPTYF+GDYGVAAPK+L  ASKD AN+GFKMDGF+VC NLYWLKGSGKF L GLSVAYL
Sbjct: 63  PLPTYFVGDYGVAAPKLLLQASKDSANQGFKMDGFKVCHNLYWLKGSGKFSLFGLSVAYL 122

Query: 97  SGRRSSGVQLFGTYSQDDVDALRAIAEEPGIV 2
           SGR+SS  Q FGTY++DDVDALRAIAEEPGIV
Sbjct: 123 SGRKSSSAQQFGTYTEDDVDALRAIAEEPGIV 154


>ref|XP_003550631.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
           [Glycine max]
          Length = 552

 Score =  270 bits (689), Expect = 1e-70
 Identities = 129/152 (84%), Positives = 139/152 (91%)
 Frame = -3

Query: 457 PRILLCGDVLGRLNQLFKRVSSVNKSAGPFDALLCVGQFFPDSPEQVDEFMSYIEGGSHI 278
           PRILLCGDVLGRLNQLFKRVSSVNKSAGPFDALLCVGQFFPDSPEQ+++F  YIEGGSH 
Sbjct: 3   PRILLCGDVLGRLNQLFKRVSSVNKSAGPFDALLCVGQFFPDSPEQLEDFTKYIEGGSHF 62

Query: 277 PLPTYFIGDYGVAAPKILSAASKDPANRGFKMDGFRVCDNLYWLKGSGKFHLLGLSVAYL 98
           PLPTYFIGDYGVAAPK+L  ASKD AN+GFKMDGF+VC NLYWLKGSGKF L GLSVAYL
Sbjct: 63  PLPTYFIGDYGVAAPKLLLQASKDSANQGFKMDGFKVCHNLYWLKGSGKFPLFGLSVAYL 122

Query: 97  SGRRSSGVQLFGTYSQDDVDALRAIAEEPGIV 2
           SGR+SS  Q FG Y++DDVDALRAIAEEPG+V
Sbjct: 123 SGRKSSSGQQFGNYTEDDVDALRAIAEEPGVV 154


>ref|XP_002332828.1| predicted protein [Populus trichocarpa] gi|222833259|gb|EEE71736.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  256 bits (654), Expect = 1e-66
 Identities = 125/155 (80%), Positives = 137/155 (88%), Gaps = 3/155 (1%)
 Frame = -3

Query: 457 PRILLCGDVLGRLNQLFKRVSSVNKSAGPFDALLCVGQFFPDSPEQVDEFMSYIEGG--- 287
           PRILLCGDVLGRLNQLFKRV SVNKSAGPFDAL CVGQFFPDS EQ++EF  YIEGG   
Sbjct: 4   PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDALFCVGQFFPDSAEQLEEFTDYIEGGGGR 63

Query: 286 SHIPLPTYFIGDYGVAAPKILSAASKDPANRGFKMDGFRVCDNLYWLKGSGKFHLLGLSV 107
           S IPLPTYFIGDYGVAAPK+LS AS++ AN GFKMDGF++CDNL+WL+GSGKF L GLSV
Sbjct: 64  SQIPLPTYFIGDYGVAAPKVLSTASRNSANLGFKMDGFKICDNLFWLRGSGKFTLHGLSV 123

Query: 106 AYLSGRRSSGVQLFGTYSQDDVDALRAIAEEPGIV 2
            YLSGR+SS  Q FGTYSQDDVDALRA+AEEPG+V
Sbjct: 124 VYLSGRQSSNGQHFGTYSQDDVDALRALAEEPGVV 158


>ref|XP_002514115.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223546571|gb|EEF48069.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 606

 Score =  251 bits (642), Expect = 3e-65
 Identities = 121/152 (79%), Positives = 135/152 (88%)
 Frame = -3

Query: 457 PRILLCGDVLGRLNQLFKRVSSVNKSAGPFDALLCVGQFFPDSPEQVDEFMSYIEGGSHI 278
           PRILLCGDVLGRLNQL+KRV SVNKSAGPFDAL CVGQFFP S EQ++EFM YI+G SHI
Sbjct: 4   PRILLCGDVLGRLNQLYKRVQSVNKSAGPFDALFCVGQFFPASSEQLEEFMDYIDGRSHI 63

Query: 277 PLPTYFIGDYGVAAPKILSAASKDPANRGFKMDGFRVCDNLYWLKGSGKFHLLGLSVAYL 98
           PLPTYFIGDYGVAAPK+LSAASK+ A  GFKMDGF + DNL+WLKGSGKF L GLS+AYL
Sbjct: 64  PLPTYFIGDYGVAAPKVLSAASKNHAKLGFKMDGFEISDNLFWLKGSGKFILHGLSIAYL 123

Query: 97  SGRRSSGVQLFGTYSQDDVDALRAIAEEPGIV 2
           SGR+S+  Q +GTYSQDD DALRA+AEEPG+V
Sbjct: 124 SGRQSADGQQYGTYSQDDADALRAMAEEPGVV 155


>ref|XP_002279554.2| PREDICTED: zinc finger CCCH domain-containing protein 64-like
           [Vitis vinifera]
          Length = 607

 Score =  250 bits (638), Expect = 1e-64
 Identities = 122/152 (80%), Positives = 132/152 (86%)
 Frame = -3

Query: 457 PRILLCGDVLGRLNQLFKRVSSVNKSAGPFDALLCVGQFFPDSPEQVDEFMSYIEGGSHI 278
           PRILLCGDVLGRLNQL KR+ SVNKSAGPFDA+LCVGQFFPDSPE++ EFM YIEG S I
Sbjct: 4   PRILLCGDVLGRLNQLVKRILSVNKSAGPFDAVLCVGQFFPDSPERLLEFMDYIEGRSQI 63

Query: 277 PLPTYFIGDYGVAAPKILSAASKDPANRGFKMDGFRVCDNLYWLKGSGKFHLLGLSVAYL 98
           PLPTYFIGDYG+ A K+LSAASKD AN GFKMDG R+CDNLYWLKGSGKF L GLSV Y+
Sbjct: 64  PLPTYFIGDYGIGAAKVLSAASKDSANLGFKMDGLRICDNLYWLKGSGKFTLHGLSVVYI 123

Query: 97  SGRRSSGVQLFGTYSQDDVDALRAIAEEPGIV 2
           SGRRS   Q FG YSQDDVDALRA+A+E GIV
Sbjct: 124 SGRRSLDGQQFGKYSQDDVDALRALADESGIV 155


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