BLASTX nr result

ID: Glycyrrhiza24_contig00024023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024023
         (1613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555577.1| PREDICTED: transcriptional regulator ATRX-li...   631   e-178
ref|XP_002263799.2| PREDICTED: uncharacterized protein LOC100244...   508   e-141
emb|CBI22318.3| unnamed protein product [Vitis vinifera]              508   e-141
ref|XP_002319663.1| chromatin remodeling complex subunit [Populu...   456   e-125
ref|XP_002522001.1| conserved hypothetical protein [Ricinus comm...   387   e-105

>ref|XP_003555577.1| PREDICTED: transcriptional regulator ATRX-like [Glycine max]
          Length = 1485

 Score =  631 bits (1628), Expect = e-178
 Identities = 340/548 (62%), Positives = 385/548 (70%), Gaps = 11/548 (2%)
 Frame = +3

Query: 3    LMGLKFPGVNEVEEIDDVDGNSTDPFVAAAIANERELDLSDEQRRHFKKVKEEDDAIVDR 182
            LMGLKFPGV+EVEEIDDVDGNSTDPF+AAAIANERELDLSDEQRR FKKVKEEDDAIVDR
Sbjct: 257  LMGLKFPGVDEVEEIDDVDGNSTDPFIAAAIANERELDLSDEQRRQFKKVKEEDDAIVDR 316

Query: 183  KLQIXXXXXXXXXXXXXXEMSTPIQTTESYIQKPSSIDHFNTVMKEGTNGD-EILSDNDK 359
            KLQI              EMSTP+  TE++IQKPS +D+ +  + EGT+ D +I+SD+ K
Sbjct: 317  KLQIRLKHRRQKRKSKQREMSTPMLLTENHIQKPSFVDNLSPAVNEGTSDDGKIVSDSGK 376

Query: 360  VACMNMETDKVEDFDASFHLDKEKPMRTGDLSDPPKSSLADIIEQRGIKRLN-GEPDTDK 536
             AC+ ME DK++ FDAS H+DKEK   TG LSD         IEQRGIKR+N GE D D 
Sbjct: 377  DACVLMEADKIKVFDASHHVDKEKLTSTGGLSDD--------IEQRGIKRVNSGELDADN 428

Query: 537  RKCPAVIINSDDEAYAAEDKLDYNIVEDHSKIKGLFNSDADALPSEGLDEKFYCTICDKV 716
            +KC  V+I+S++EA   E+KLD N  E     + L N+   +LPSE LDEKF+CT+CDKV
Sbjct: 429  KKCRIVVIDSNNEAEVTENKLDCNTQEVK---EDLCNNGGASLPSECLDEKFWCTVCDKV 485

Query: 717  ALEVHPHPLLKVIICGDCNCIMKEKTHPKELVPDCSECYCAWCGGSSVLVSXXXXXXXXX 896
            ALEVHPHP LKVI CGDCNC++KEKTH K+   DCSE YC WCGGSS LV          
Sbjct: 486  ALEVHPHPFLKVITCGDCNCLLKEKTHKKDQGQDCSEGYCTWCGGSSELVCCKLCKILFC 545

Query: 897  XXXIQKNLGVEFDAEAQATGWHCCCCRPNLLQRLSLQLEKAMGSADMLVXXXXXXXXXXX 1076
               ++KN+GVE     + T WHCCCC PNLLQ+LSLQL KA+G+AD++V           
Sbjct: 546  TKCLKKNIGVELVPGVEDTSWHCCCCHPNLLQKLSLQLAKAVGAADLIVSSSGSDSDSSD 605

Query: 1077 XXXX---------EINATXXXXXXXXXXXXXXLDDAELGXXXXXXXXXXXXRQERLNSLR 1229
                         ++N T              LDDAELG            RQERL SLR
Sbjct: 606  DSDNSDDSDDSDAKVNVTISSKRRHKKKIRRILDDAELGEETKRKIAIEKERQERLKSLR 665

Query: 1230 EQFSASSIDNSSAGCNGNSSEGASVETLSDAIAGYIVNGVREKGEEAVRIPPSISAKLKA 1409
             QFSASS + SS GCNGN SE ASVE L DA+AGYIVN VREKGEEAVRIPPSISAKLKA
Sbjct: 666  GQFSASSFEMSSDGCNGNLSESASVEVLGDAVAGYIVNVVREKGEEAVRIPPSISAKLKA 725

Query: 1410 HQIAGIRFMWENIIQSIRNVKSGDKGLGCILAHTMGLGKTLQVIAFLYTAMRSVDLGLRT 1589
            HQI GIRFMWENIIQSIR VKSGDKGLGCILAHTMGLGKT QVIAFLYTAMR VDLGLRT
Sbjct: 726  HQITGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLGLRT 785

Query: 1590 ALIVTPVN 1613
             LIVTPVN
Sbjct: 786  VLIVTPVN 793


>ref|XP_002263799.2| PREDICTED: uncharacterized protein LOC100244360 [Vitis vinifera]
          Length = 1507

 Score =  508 bits (1309), Expect = e-141
 Identities = 283/550 (51%), Positives = 355/550 (64%), Gaps = 13/550 (2%)
 Frame = +3

Query: 3    LMGLKFPGVNEVEEIDDVDGNSTDPFVAAAIANERELDLSDEQRRHFKKVKEEDDAIVDR 182
            +MGLKFPGV+EVEEIDD+DGNS+DPFVA AIANER +DLS+EQ++ FKKVKEEDDA +DR
Sbjct: 260  VMGLKFPGVDEVEEIDDIDGNSSDPFVADAIANERAVDLSEEQKKKFKKVKEEDDANIDR 319

Query: 183  KLQIXXXXXXXXXXXXXXEMSTPIQTTESYIQKPSSI-DHFNTVMKEGTNGD--EILSDN 353
            KLQ+               +    +  E+ +     + D+   V++E T GD   I ++N
Sbjct: 320  KLQLHLKRRRYRKRSTQETIQKEDRLAENILDNSVLLNDYSQAVLREKTRGDGVSISNNN 379

Query: 354  DKVACMNMETDKVEDFDASFHLDKEKPMRTGDLSDPPKSSLADIIEQRGIKRL--NGEPD 527
            D  AC + +T+  E  +    LDKE+P   G+ S    S L D  E +G KR   NGE D
Sbjct: 380  DDGACQSSKTEVSESLEMPDTLDKERPASNGNSSVLSGSVLPDSTETKGFKRSHDNGELD 439

Query: 528  TDKRKCPAVIINSDDEAYAAEDKLDYNIVEDHSKIKG---LFNSDAD-----ALPSEGLD 683
             D ++   VII+SDDE +   + +  ++V + +K++G   L  ++ D     +LPS+ ++
Sbjct: 440  VDNKRFRTVIIDSDDETHEVGN-VSNSLVNNMTKMEGQSVLQETEGDFVGSGSLPSKHMN 498

Query: 684  EKFYCTICDKVALEVHPHPLLKVIICGDCNCIMKEKTHPKELVPDCSECYCAWCGGSSVL 863
              F+CT C+KVA+EVH HPLLKVIICGDC C+++ K H K+  PDCSECYC WCG S+ L
Sbjct: 499  GNFHCTACNKVAIEVHCHPLLKVIICGDCKCLIERKMHVKD--PDCSECYCGWCGRSNDL 556

Query: 864  VSXXXXXXXXXXXXIQKNLGVEFDAEAQATGWHCCCCRPNLLQRLSLQLEKAMGSADMLV 1043
            V             I++N+G E  ++ +A+GW CCCC P+LLQ+L+ +LEKA+GS+ + V
Sbjct: 557  VGCKSCKTLFCITCIKRNIGEECLSDVKASGWQCCCCSPSLLQQLTSELEKAIGSSSLTV 616

Query: 1044 XXXXXXXXXXXXXXXEINATXXXXXXXXXXXXXXLDDAELGXXXXXXXXXXXXRQERLNS 1223
                           +IN                LDDAELG            RQERL S
Sbjct: 617  SSSDSDSDDSDE---DINVAISSKRRRKKKIRRILDDAELGEETKRKIAIEKERQERLKS 673

Query: 1224 LREQFSASSIDNSSAGCNGNSSEGASVETLSDAIAGYIVNGVREKGEEAVRIPPSISAKL 1403
            L+ QFS  S   ++A CNGN SE  SVE L DA  GYIVN VREKGEEAVRIPPSISAKL
Sbjct: 674  LQVQFSEKSKMMNAASCNGNLSEDTSVEVLGDASKGYIVNVVREKGEEAVRIPPSISAKL 733

Query: 1404 KAHQIAGIRFMWENIIQSIRNVKSGDKGLGCILAHTMGLGKTLQVIAFLYTAMRSVDLGL 1583
            K HQI GIRFMWENIIQSIR VKSGDKGLGCILAHTMGLGKT QVIAFLYTAMRS+DLGL
Sbjct: 734  KVHQITGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSIDLGL 793

Query: 1584 RTALIVTPVN 1613
            RTALIVTPVN
Sbjct: 794  RTALIVTPVN 803


>emb|CBI22318.3| unnamed protein product [Vitis vinifera]
          Length = 1477

 Score =  508 bits (1309), Expect = e-141
 Identities = 283/550 (51%), Positives = 355/550 (64%), Gaps = 13/550 (2%)
 Frame = +3

Query: 3    LMGLKFPGVNEVEEIDDVDGNSTDPFVAAAIANERELDLSDEQRRHFKKVKEEDDAIVDR 182
            +MGLKFPGV+EVEEIDD+DGNS+DPFVA AIANER +DLS+EQ++ FKKVKEEDDA +DR
Sbjct: 232  VMGLKFPGVDEVEEIDDIDGNSSDPFVADAIANERAVDLSEEQKKKFKKVKEEDDANIDR 291

Query: 183  KLQIXXXXXXXXXXXXXXEMSTPIQTTESYIQKPSSI-DHFNTVMKEGTNGD--EILSDN 353
            KLQ+               +    +  E+ +     + D+   V++E T GD   I ++N
Sbjct: 292  KLQLHLKRRRYRKRSTQETIQKEDRLAENILDNSVLLNDYSQAVLREKTRGDGVSISNNN 351

Query: 354  DKVACMNMETDKVEDFDASFHLDKEKPMRTGDLSDPPKSSLADIIEQRGIKRL--NGEPD 527
            D  AC + +T+  E  +    LDKE+P   G+ S    S L D  E +G KR   NGE D
Sbjct: 352  DDGACQSSKTEVSESLEMPDTLDKERPASNGNSSVLSGSVLPDSTETKGFKRSHDNGELD 411

Query: 528  TDKRKCPAVIINSDDEAYAAEDKLDYNIVEDHSKIKG---LFNSDAD-----ALPSEGLD 683
             D ++   VII+SDDE +   + +  ++V + +K++G   L  ++ D     +LPS+ ++
Sbjct: 412  VDNKRFRTVIIDSDDETHEVGN-VSNSLVNNMTKMEGQSVLQETEGDFVGSGSLPSKHMN 470

Query: 684  EKFYCTICDKVALEVHPHPLLKVIICGDCNCIMKEKTHPKELVPDCSECYCAWCGGSSVL 863
              F+CT C+KVA+EVH HPLLKVIICGDC C+++ K H K+  PDCSECYC WCG S+ L
Sbjct: 471  GNFHCTACNKVAIEVHCHPLLKVIICGDCKCLIERKMHVKD--PDCSECYCGWCGRSNDL 528

Query: 864  VSXXXXXXXXXXXXIQKNLGVEFDAEAQATGWHCCCCRPNLLQRLSLQLEKAMGSADMLV 1043
            V             I++N+G E  ++ +A+GW CCCC P+LLQ+L+ +LEKA+GS+ + V
Sbjct: 529  VGCKSCKTLFCITCIKRNIGEECLSDVKASGWQCCCCSPSLLQQLTSELEKAIGSSSLTV 588

Query: 1044 XXXXXXXXXXXXXXXEINATXXXXXXXXXXXXXXLDDAELGXXXXXXXXXXXXRQERLNS 1223
                           +IN                LDDAELG            RQERL S
Sbjct: 589  SSSDSDSDDSDE---DINVAISSKRRRKKKIRRILDDAELGEETKRKIAIEKERQERLKS 645

Query: 1224 LREQFSASSIDNSSAGCNGNSSEGASVETLSDAIAGYIVNGVREKGEEAVRIPPSISAKL 1403
            L+ QFS  S   ++A CNGN SE  SVE L DA  GYIVN VREKGEEAVRIPPSISAKL
Sbjct: 646  LQVQFSEKSKMMNAASCNGNLSEDTSVEVLGDASKGYIVNVVREKGEEAVRIPPSISAKL 705

Query: 1404 KAHQIAGIRFMWENIIQSIRNVKSGDKGLGCILAHTMGLGKTLQVIAFLYTAMRSVDLGL 1583
            K HQI GIRFMWENIIQSIR VKSGDKGLGCILAHTMGLGKT QVIAFLYTAMRS+DLGL
Sbjct: 706  KVHQITGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSIDLGL 765

Query: 1584 RTALIVTPVN 1613
            RTALIVTPVN
Sbjct: 766  RTALIVTPVN 775


>ref|XP_002319663.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222858039|gb|EEE95586.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1404

 Score =  456 bits (1172), Expect = e-125
 Identities = 263/539 (48%), Positives = 318/539 (58%), Gaps = 2/539 (0%)
 Frame = +3

Query: 3    LMGLKFPGVNEVEEIDDVDGNSTDPFVAAAIANERELDLSDEQRRHFKKVKEEDDAIVDR 182
            LMGLKFPGVNEVEEI+D+DGNSTDPFVA AIANE+EL LS+EQR++++KVKEEDDA +D+
Sbjct: 220  LMGLKFPGVNEVEEIEDIDGNSTDPFVAEAIANEKELVLSEEQRKNYRKVKEEDDAKIDQ 279

Query: 183  KLQIXXXXXXXXXXXXXXEMSTPIQTTESYIQKPSSIDHFNTVMKEGTNGDEILSDNDKV 362
            KLQ+              ++                               E   D D  
Sbjct: 280  KLQLRLKQRRRLKRCKQKDVC------------------------------ENSGDLDME 309

Query: 363  ACMNMETDKVEDFDASFHLDKEKPMRTGDLSDPPKSSLADIIEQRGIKRLNGEPDTDKRK 542
              M+       + DAS     ++P  + DLS                         + +K
Sbjct: 310  QLMSESNSVFPESDASEPRRSKRPNESEDLS------------------------INNKK 345

Query: 543  CPAVIINSDDEAYAAEDKLDYNI-VEDHSK-IKGLFNSDADALPSEGLDEKFYCTICDKV 716
               VII+SD+EA   EDK  + I VED S  ++ + +  A   PS+G  EKF CT CDKV
Sbjct: 346  IRTVIIDSDNEADILEDKSVHGIKVEDQSTLLENIGDPSAGCNPSQGSSEKFQCTACDKV 405

Query: 717  ALEVHPHPLLKVIICGDCNCIMKEKTHPKELVPDCSECYCAWCGGSSVLVSXXXXXXXXX 896
            A+EVH HPLLKVI+C DC  +M+EK H K+  PDCSECYC WCG ++ LVS         
Sbjct: 406  AVEVHSHPLLKVIVCKDCKFLMEEKMHVKD--PDCSECYCGWCGKNNDLVSCRSCRTLFC 463

Query: 897  XXXIQKNLGVEFDAEAQATGWHCCCCRPNLLQRLSLQLEKAMGSADMLVXXXXXXXXXXX 1076
               I++N+G E+  +   +GW CCCC P+LLQRL+ QLEKAMGS D++V           
Sbjct: 464  TACIKRNIGEEYLYKVPVSGWQCCCCSPSLLQRLTSQLEKAMGSGDIMVSSSDSDSDSSD 523

Query: 1077 XXXXEINATXXXXXXXXXXXXXXLDDAELGXXXXXXXXXXXXRQERLNSLREQFSASSID 1256
                    T              +DDAELG            RQERL SL+ +FS  S  
Sbjct: 524  TND---GVTISSKRKKQKKIRRIIDDAELGEETKRKIAIEKERQERLKSLKVKFSDKSKM 580

Query: 1257 NSSAGCNGNSSEGASVETLSDAIAGYIVNGVREKGEEAVRIPPSISAKLKAHQIAGIRFM 1436
             + A C+GN  EGASVE + DA  GYIVN  REKGEEAVRIPPS+S+KLKAHQ+AGIRF+
Sbjct: 581  MNFASCSGNLPEGASVEVIGDATTGYIVNVAREKGEEAVRIPPSLSSKLKAHQVAGIRFL 640

Query: 1437 WENIIQSIRNVKSGDKGLGCILAHTMGLGKTLQVIAFLYTAMRSVDLGLRTALIVTPVN 1613
            WENIIQSIR VKSGD GLGCILAHTMGLGKT QVIAFLYTAMR VDLGLRTALIVTPVN
Sbjct: 641  WENIIQSIRKVKSGDNGLGCILAHTMGLGKTFQVIAFLYTAMRGVDLGLRTALIVTPVN 699


>ref|XP_002522001.1| conserved hypothetical protein [Ricinus communis]
            gi|223538805|gb|EEF40405.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1447

 Score =  387 bits (995), Expect = e-105
 Identities = 213/416 (51%), Positives = 261/416 (62%), Gaps = 4/416 (0%)
 Frame = +3

Query: 378  ETDKVEDFDASFHLDKEKPMRTGDLSDPPKSSLADIIEQRGIKRLN--GEPDTDKRKCPA 551
            E D + D     HL + +  +         +S     E R  KR N  GEP  D +K   
Sbjct: 326  EDDAIIDRKLQLHLKQRRRRKRSKQVMIMTTSNFLFCESRKSKRPNESGEPTNDAKKIRT 385

Query: 552  VIINSDDEAYAAEDKLDY--NIVEDHSKIKGLFNSDADALPSEGLDEKFYCTICDKVALE 725
            VII+SDDEA    + +     +V + +  + +  S AD   S+ ++E+F+CT+C K+  E
Sbjct: 386  VIIDSDDEADGINESVSSANRVVVESTLQENIGESGADGHLSQCVNEEFHCTVCHKICFE 445

Query: 726  VHPHPLLKVIICGDCNCIMKEKTHPKELVPDCSECYCAWCGGSSVLVSXXXXXXXXXXXX 905
            VH HPLLKVIIC DC C +++K H K+  P+CSECYCAWCG S+ LVS            
Sbjct: 446  VHSHPLLKVIICKDCKCSIEKKMHVKD--PECSECYCAWCGRSNDLVSCKSCKTLFCTTC 503

Query: 906  IQKNLGVEFDAEAQATGWHCCCCRPNLLQRLSLQLEKAMGSADMLVXXXXXXXXXXXXXX 1085
            +++N+G E  +EAQ++GW CCCC PN LQRL+L+LEKAMGS D++               
Sbjct: 504  VKRNIGEECLSEAQSSGWQCCCCSPNQLQRLTLELEKAMGSEDLM---DTSSDSESENSD 560

Query: 1086 XEINATXXXXXXXXXXXXXXLDDAELGXXXXXXXXXXXXRQERLNSLREQFSASSIDNSS 1265
             +I+                LDDAELG            RQERL SL+ QF+  S   ++
Sbjct: 561  ADIHVAIRKKNKKKKKIRRILDDAELGEETQRKIAIEKERQERLKSLKVQFTDKSKMMNT 620

Query: 1266 AGCNGNSSEGASVETLSDAIAGYIVNGVREKGEEAVRIPPSISAKLKAHQIAGIRFMWEN 1445
            A CNGN  EGAS E L DA  GYIVN VREKGEEAVRIPPSISAKLKAHQ+AGIRFMWEN
Sbjct: 621  ASCNGNLPEGASFEVLGDAATGYIVNVVREKGEEAVRIPPSISAKLKAHQVAGIRFMWEN 680

Query: 1446 IIQSIRNVKSGDKGLGCILAHTMGLGKTLQVIAFLYTAMRSVDLGLRTALIVTPVN 1613
            I+QSI  VKSGD+GLGCILAHTMGLGKT QVIAFLYTAMRS+DLGLRTALIVTPVN
Sbjct: 681  IVQSIGKVKSGDRGLGCILAHTMGLGKTFQVIAFLYTAMRSIDLGLRTALIVTPVN 736



 Score =  100 bits (250), Expect = 8e-19
 Identities = 47/63 (74%), Positives = 58/63 (92%)
 Frame = +3

Query: 6   MGLKFPGVNEVEEIDDVDGNSTDPFVAAAIANERELDLSDEQRRHFKKVKEEDDAIVDRK 185
           MGLKFPGV+EVEEI+D+DG S DPF+A AIANE+EL LS+EQR+++ KVKEEDDAI+DRK
Sbjct: 275 MGLKFPGVDEVEEIEDIDGCSNDPFIAVAIANEKELILSEEQRKNYIKVKEEDDAIIDRK 334

Query: 186 LQI 194
           LQ+
Sbjct: 335 LQL 337


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