BLASTX nr result

ID: Glycyrrhiza24_contig00023989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023989
         (1489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589602.1| Filament-like plant protein [Medicago trunca...   553   e-156
ref|XP_003545637.1| PREDICTED: filament-like plant protein-like ...   385   e-104
ref|XP_003543808.1| PREDICTED: filament-like plant protein-like ...   376   e-102
ref|XP_002513759.1| DNA double-strand break repair rad50 ATPase,...   314   3e-83
ref|XP_002302234.1| predicted protein [Populus trichocarpa] gi|2...   277   5e-72

>ref|XP_003589602.1| Filament-like plant protein [Medicago truncatula]
            gi|355478650|gb|AES59853.1| Filament-like plant protein
            [Medicago truncatula]
          Length = 606

 Score =  553 bits (1425), Expect(2) = e-156
 Identities = 320/460 (69%), Positives = 350/460 (76%), Gaps = 3/460 (0%)
 Frame = -1

Query: 1489 SGERLTAVDSDIHKISGSEPNKYEPSCSDSWASALIAELDQFKNEKC-RQA-PSSSVKID 1316
            S ERLTAVD DI K++GSE N+ EPSCSDSWASALIAELDQFKNEKC RQA PSSS+KID
Sbjct: 153  STERLTAVDCDILKMNGSE-NRCEPSCSDSWASALIAELDQFKNEKCCRQADPSSSLKID 211

Query: 1315 LMDDFLEMERLVALPEIKNESS-AQESVVANECTDKESSLRAEFEIMIQQMDELKEKLEK 1139
            LMDDFLEMERL ALPE KN SS  +E VVA++C DKES+LRAEF+IM QQMDELK KLEK
Sbjct: 212  LMDDFLEMERLAALPETKNASSFVEELVVADKCVDKESTLRAEFDIMTQQMDELKGKLEK 271

Query: 1138 VEADKAELEIALMKSEEYIEESXXXXXXXXXXXXXXXXXXENAYKSKQKIENRLMSMDAE 959
            V+ADKAELEIALMKSEE IEES                  ENAYKSKQ IENRLMSM+A+
Sbjct: 272  VQADKAELEIALMKSEECIEESHLQLKEAVQKLEELQIELENAYKSKQTIENRLMSMEAD 331

Query: 958  AQTLSAXXXXXXXXXXXERAVSHEIAMKCKDLEEELGSKSAKLDLLEAEVDKERTMSHEI 779
            + TLS+           ER              EEL SKSA L LLEA+VDKE+ MSHEI
Sbjct: 332  SHTLSSKVNLLEAEVDKER--------------EELESKSAMLGLLEADVDKEKNMSHEI 377

Query: 778  VIKCKDLEKELEGKSEKVGLLETEVAKERAMSDEITRKCKDLEEELESKSAKVDLLETEV 599
             IKC+ LE+ELE K  K+ LLE+E+ KERA SDEI  KCKDL EE E K AKVD LE EV
Sbjct: 378  AIKCEGLEEELESKCAKLELLESEIVKERAASDEIAAKCKDLVEEFERKCAKVDFLEAEV 437

Query: 598  DKERAMSEEIAMKCRELEEEILRSTASSYGEKKIKQEDLALAAGKLAECQKTIASLGNQL 419
            +KERAMSEEIA+KCRELEEEILR TAS YGEKKIKQEDLALAAGKLAECQKTIASLGNQL
Sbjct: 438  EKERAMSEEIAVKCRELEEEILRPTASLYGEKKIKQEDLALAAGKLAECQKTIASLGNQL 497

Query: 418  KSLATLEDFLIDTASIPPSPSLIAQAGGEMWKLHSNDTFSPKRDSTSSKLLADGGSCSGP 239
            KSLATLEDFLIDTASIP SP++IA AGGEMW++HSN TFSPKRDSTSS+ LADG   S  
Sbjct: 498  KSLATLEDFLIDTASIPASPAIIAHAGGEMWRMHSNGTFSPKRDSTSSR-LADG---SSG 553

Query: 238  SSLNKNEECXXXXXXXXXXSAALPNHVNSEKSRNGFAKFF 119
            +SLNK EE           SA LPNH +SEK R GFAK F
Sbjct: 554  ASLNKYEESSPLSSTSSTSSATLPNHASSEKGRIGFAKIF 593



 Score = 28.5 bits (62), Expect(2) = e-156
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -3

Query: 128 EIFLANQEWNPARNL 84
           +IFLANQEW  ARNL
Sbjct: 591 KIFLANQEWYSARNL 605


>ref|XP_003545637.1| PREDICTED: filament-like plant protein-like [Glycine max]
          Length = 957

 Score =  385 bits (990), Expect = e-104
 Identities = 243/459 (52%), Positives = 286/459 (62%), Gaps = 27/459 (5%)
 Frame = -1

Query: 1381 AELDQFKNEKCRQAPSSSVKIDLMDDFLEMERLVALPEIKNESSAQESVVANECTDKESS 1202
            A++D  + E  ++  SS + +   D   E+ER  A  +I     A+E  +++E   K   
Sbjct: 503  AKVDILEVELDKKDLSSEIAMKCRDLEEELERKSAKVDILEAEVAKEKDLSSEIVMKCMD 562

Query: 1201 LRAEFEIMIQQMDELKEKLEKVEADKAELEIALMKSEEYIEESXXXXXXXXXXXXXXXXX 1022
            L  E E    ++D L+ +L+K +   +E+ +     E+ +E                   
Sbjct: 563  LEEELERKSAEVDILEAELDKKKDLSSEIALKFRDLEKDLERKSAKVNILEAELDKKDMP 622

Query: 1021 XENAYKSKQ---------------------------KIENRLMSMDAEAQTLSAXXXXXX 923
             E A K K                            KI  +   ++ E Q  SA      
Sbjct: 623  NEIAMKCKDLKEELESKSTKVDLLEAEVAKERDVSDKIAKKCKDLEEELQRKSAKVELLE 682

Query: 922  XXXXXERAVSHEIAMKCKDLEEELGSKSAKLDLLEAEVDKERTMSHEIVIKCKDLEKELE 743
                 ER VS + A KCKDLEEEL  KSAK++LLEAEV KER +  +I  KCKDLE+ LE
Sbjct: 683  AEVAKERDVSDKYAKKCKDLEEELQRKSAKVELLEAEVAKERDVLDKIAKKCKDLEEVLE 742

Query: 742  GKSEKVGLLETEVAKERAMSDEITRKCKDLEEELESKSAKVDLLETEVDKERAMSEEIAM 563
             KS KV LL+ EV  ERA+SDEI+ KCKDLEE+LE KSAKVDLLE E+ KERA SEEIAM
Sbjct: 743  SKSAKVELLDAEVDNERAVSDEISMKCKDLEEKLERKSAKVDLLEEELHKERANSEEIAM 802

Query: 562  KCRELEEEILRSTASSYGEKKIKQEDLALAAGKLAECQKTIASLGNQLKSLATLEDFLID 383
            KCRELEEE+LRSTASSYGEKKIKQEDLALAAGKLAECQKTIASLGNQLKSLATLEDFLID
Sbjct: 803  KCRELEEELLRSTASSYGEKKIKQEDLALAAGKLAECQKTIASLGNQLKSLATLEDFLID 862

Query: 382  TASIPPSPSLIAQAGGEMWKLHSNDTFSPKRDSTSSKLLADGGSCSGPSSLNKNEECXXX 203
            TASIP SPSLI QAGGE+WKLHSN TF PKRDS  S+ LADG S     SLNKNEE    
Sbjct: 863  TASIPASPSLIGQAGGELWKLHSNGTFLPKRDSICSR-LADGSSY---PSLNKNEETSPL 918

Query: 202  XXXXXXXSAALPNHVNSEKSRNGFAKFFSRTKSGIRLEI 86
                   S AL NHV+SE+SRNGFAKFFSRTKSGIRLEI
Sbjct: 919  SSSSSTSSPALQNHVSSERSRNGFAKFFSRTKSGIRLEI 957



 Score =  378 bits (971), Expect = e-102
 Identities = 214/368 (58%), Positives = 261/368 (70%), Gaps = 1/368 (0%)
 Frame = -1

Query: 1489 SGERLTAVDSDIHKISGSEPNKYEPSCSDSWASALIAELDQFKNEKCRQAPSSSVKIDLM 1310
            S +RL  ++++  K++GSEPNK EPSC DSWASALIAELDQFKNEKCRQ PSSSVKIDLM
Sbjct: 286  SADRLATLETEAKKMNGSEPNKCEPSCLDSWASALIAELDQFKNEKCRQTPSSSVKIDLM 345

Query: 1309 DDFLEMERLVALPEIKNESSAQESVVANECTDKESSLRAEFEIMIQQMDELKEKLEKVEA 1130
            DDFLEMERLVALPE K E+  QE V  N+C +KE SLR EFEIM QQMDELKEKLEKVEA
Sbjct: 346  DDFLEMERLVALPESKKENMVQELVAINQCINKEISLRVEFEIMNQQMDELKEKLEKVEA 405

Query: 1129 DKAELEIALMKSEEYIEESXXXXXXXXXXXXXXXXXXENAYKSKQKIENRLMSMDAEAQT 950
            DKAELEIALM SEE IEES                  ENAYKSKQ++EN L+ M AEA+T
Sbjct: 406  DKAELEIALMNSEECIEESQHQLRETQEKLEELQRELENAYKSKQRVENHLLDMVAEAET 465

Query: 949  LSAXXXXXXXXXXXERAVSHEIAMKCKDLEEELGSKSAKLDLLEAEVDKERTMSHEIVIK 770
            LS            ERAVS EIAMK +DLEEE   KSAK+D+LE E+DK + +S EI +K
Sbjct: 466  LSVKVEFLEAEVDKERAVSSEIAMKYRDLEEEFERKSAKVDILEVELDK-KDLSSEIAMK 524

Query: 769  CKDLEKELEGKSEKVGLLETEVAKERAMSDEITRKCKDLEEELESKSAKVDLLETEVDKE 590
            C+DLE+ELE KS KV +LE EVAKE+ +S EI  KC DLEEELE KSA+VD+LE E+DK+
Sbjct: 525  CRDLEEELERKSAKVDILEAEVAKEKDLSSEIVMKCMDLEEELERKSAEVDILEAELDKK 584

Query: 589  RAMSEEIAMKCRELEEEILRSTAS-SYGEKKIKQEDLALAAGKLAECQKTIASLGNQLKS 413
            + +S EIA+K R+LE+++ R +A  +  E ++ ++D+        E       L  +L+S
Sbjct: 585  KDLSSEIALKFRDLEKDLERKSAKVNILEAELDKKDMP------NEIAMKCKDLKEELES 638

Query: 412  LATLEDFL 389
             +T  D L
Sbjct: 639  KSTKVDLL 646


>ref|XP_003543808.1| PREDICTED: filament-like plant protein-like [Glycine max]
          Length = 911

 Score =  376 bits (966), Expect = e-102
 Identities = 236/441 (53%), Positives = 283/441 (64%), Gaps = 7/441 (1%)
 Frame = -1

Query: 1387 LIAELDQFKNEKCRQAPSSSVKIDLMDDFLEMERLVALPEIKNESSAQESVVANECTDKE 1208
            L AELD+ K+       SS + +   D   E+ER  A  +I      ++  +++E   K 
Sbjct: 489  LEAELDKKKDL------SSEIAMKCRDLEEELERKSAKVDILESELDKKKDLSSEIAIKC 542

Query: 1207 SSLRAEFEIMIQQMDELKEKLEKVEADKAELEIALMKSEEYIEESXXXXXXXXXXXXXXX 1028
              L  E E    ++D L+ +L+K +   +E+ +     EE +E                 
Sbjct: 543  RDLEEELERKSAKVDILEAELDKKKDLSSEIAMKYKDLEEELERKSAKVSILEAELDKKD 602

Query: 1027 XXXENAYKSKQKIENRLMSMDAEAQTLSAXXXXXXXXXXXERAVSHEIAMKCKDLEEELG 848
                 A K K  +E  L S   +   L A            R VS +IA K  DLEEEL 
Sbjct: 603  MPNAIAMKCKD-LEEELESKSTKVDLLEAKVAKE-------RVVSEKIAKKYMDLEEELE 654

Query: 847  SKSAKLDLLEAEVDKERTMSHEIVIKCKDLEKELEGKSEKVGLLETEVAKERAMSDEITR 668
            SK AK++LLEA+V KER +S +I   CKDLE+EL+ KS KV LLE EVAKER + D+I +
Sbjct: 655  SKFAKVELLEAQVAKERDVSDKIAKMCKDLEEELQRKSAKVELLEAEVAKERDVLDKIAK 714

Query: 667  KCKDLEEELESKSAKVDLLETEVDKERAMSEEIAMKCRELEEEILR-------STASSYG 509
            KCKDLEE LESKSAKV+LL+ EVD ERA+S+EI+MKC++LEE++ R       ST SSYG
Sbjct: 715  KCKDLEEVLESKSAKVELLDAEVDNERAVSDEISMKCKDLEEKLERKSAKVDLSTTSSYG 774

Query: 508  EKKIKQEDLALAAGKLAECQKTIASLGNQLKSLATLEDFLIDTASIPPSPSLIAQAGGEM 329
            EKKIKQEDLALAAGKLAECQKTIASLGNQLKSLATLEDFLIDTASIP SPSLI QAGGE+
Sbjct: 775  EKKIKQEDLALAAGKLAECQKTIASLGNQLKSLATLEDFLIDTASIPASPSLIGQAGGEL 834

Query: 328  WKLHSNDTFSPKRDSTSSKLLADGGSCSGPSSLNKNEECXXXXXXXXXXSAALPNHVNSE 149
            WK HSN TFSPKRDS SS+ LADG SC    SLNKNEE           S ALPNHV+SE
Sbjct: 835  WKFHSNGTFSPKRDSISSR-LADGSSC---PSLNKNEETSSLSSSSSTSSPALPNHVSSE 890

Query: 148  KSRNGFAKFFSRTKSGIRLEI 86
            +SRNGFAKFFSRTKSGIRLEI
Sbjct: 891  RSRNGFAKFFSRTKSGIRLEI 911



 Score =  356 bits (913), Expect = 1e-95
 Identities = 203/340 (59%), Positives = 250/340 (73%), Gaps = 1/340 (0%)
 Frame = -1

Query: 1405 DSWASALIAELDQFKNEKCRQAPSSSVKIDLMDDFLEMERLVALPEIKNESSAQESVVAN 1226
            +SWASALIAELDQFKNEKCRQ PS+SVKIDLMDDFLEMERLVALPE + E+  QESVV N
Sbjct: 295  NSWASALIAELDQFKNEKCRQTPSNSVKIDLMDDFLEMERLVALPESEKETMVQESVVTN 354

Query: 1225 ECTDKESSLRAEFEIMIQQMDELKEKLEKVEADKAELEIALMKSEEYIEESXXXXXXXXX 1046
            +C +KESSLR EFEIM QQMDELKEKLEKVEADKAELEIALMKSE  IEES         
Sbjct: 355  QCMNKESSLRVEFEIMNQQMDELKEKLEKVEADKAELEIALMKSEGCIEESQLQLREAQE 414

Query: 1045 XXXXXXXXXENAYKSKQKIENRLMSMDAEAQTLSAXXXXXXXXXXXERAVSHEIAMKCKD 866
                     ENAYKSKQ++EN L+ M AEA+TLS            ERAVS EIAMK ++
Sbjct: 415  KLEELQREVENAYKSKQRVENHLLDMVAEAETLSVKVEFLEAEVDKERAVSCEIAMKYRN 474

Query: 865  LEEELGSKSAKLDLLEAEVDKERTMSHEIVIKCKDLEKELEGKSEKVGLLETEVAKERAM 686
            LEEEL  KSAK+D+LEAE+DK++ +S EI +KC+DLE+ELE KS KV +LE+E+ K++ +
Sbjct: 475  LEEELERKSAKVDILEAELDKKKDLSSEIAMKCRDLEEELERKSAKVDILESELDKKKDL 534

Query: 685  SDEITRKCKDLEEELESKSAKVDLLETEVDKERAMSEEIAMKCRELEEEILRSTAS-SYG 509
            S EI  KC+DLEEELE KSAKVD+LE E+DK++ +S EIAMK ++LEEE+ R +A  S  
Sbjct: 535  SSEIAIKCRDLEEELERKSAKVDILEAELDKKKDLSSEIAMKYKDLEEELERKSAKVSIL 594

Query: 508  EKKIKQEDLALAAGKLAECQKTIASLGNQLKSLATLEDFL 389
            E ++ ++D+  A     +C+     L  +L+S +T  D L
Sbjct: 595  EAELDKKDMPNAIA--MKCK----DLEEELESKSTKVDLL 628


>ref|XP_002513759.1| DNA double-strand break repair rad50 ATPase, putative [Ricinus
            communis] gi|223546845|gb|EEF48342.1| DNA double-strand
            break repair rad50 ATPase, putative [Ricinus communis]
          Length = 711

 Score =  314 bits (805), Expect = 3e-83
 Identities = 205/454 (45%), Positives = 267/454 (58%), Gaps = 14/454 (3%)
 Frame = -1

Query: 1405 DSWASALIAELDQFKNEKC--RQAPSSSVKIDLMDDFLEMERLVALPEIKNES-SAQESV 1235
            +SWASALIA LDQFKNEK   R  PSSS++IDLMDDFLEMERL ALPE K+ + +++   
Sbjct: 296  NSWASALIAGLDQFKNEKNANRNLPSSSIEIDLMDDFLEMERLAALPETKSGTLNSKPEA 355

Query: 1234 VANECTDKESSLRAEFEIMIQQMDELKEKLEKVEADKAELEIALMKSEEYIEESXXXXXX 1055
            VA   TD ESSLRAE EIMI +  EL+EKL+K+E +K +LE  L K E            
Sbjct: 356  VAKPSTDSESSLRAELEIMINRTAELEEKLQKMEGEKLKLEAKLQKME------------ 403

Query: 1054 XXXXXXXXXXXXENAYKSKQKIENRLMSMDAEAQTLSAXXXXXXXXXXXERAVSHEIAMK 875
                         +   + QK+E   + ++A  Q + A                 E    
Sbjct: 404  ---------GEKLDLEANLQKMEEENLELEANLQKMEAEYLELETNLQKMEGEKFE---- 450

Query: 874  CKDLEEELGSKSAKLDLLEAEVDKERTMSHEIVIKCKDLEKELEGKSEKVGLLETEVAKE 695
               LEE+L +   +   LE  +   +  S E +I+ ++ E  LE        L+ E++K 
Sbjct: 451  ---LEEKLENIQVERTELEMTLTISQEKSEEFLIQLREAELRLEK-------LQKELSKA 500

Query: 694  RAMSDEITRKCKDLEEELESKSAKVDLLETEVDKERAMSEEIAMKCRELEEEI------- 536
                 +I  +   +E E  + ++KV+LLE EV+KER +S E  +KC+ LEEE+       
Sbjct: 501  NESKQQIESQLVHMEVEARTMASKVNLLEAEVEKERVLSAETGVKCKALEEELSEKKLEI 560

Query: 535  -LRSTASSYGEKKIKQEDLALAAGKLAECQKTIASLGNQLKSLATLEDFLIDTASIP--- 368
             L+ +ASS  E KIKQEDL +AAGKLAECQKTIASLG QLKSLATLEDFLIDTASIP   
Sbjct: 561  DLQKSASSNSEPKIKQEDLDVAAGKLAECQKTIASLGKQLKSLATLEDFLIDTASIPEFS 620

Query: 367  PSPSLIAQAGGEMWKLHSNDTFSPKRDSTSSKLLADGGSCSGPSSLNKNEECXXXXXXXX 188
               SLI +A GE WKLHS++TFSPKRDS+SS+L ++    SGPS                
Sbjct: 621  AGGSLIHRASGEPWKLHSSETFSPKRDSSSSRLASEN---SGPSVHKIEGRSPPSSSSSS 677

Query: 187  XXSAALPNHVNSEKSRNGFAKFFSRTKSGIRLEI 86
              S+A  NH++S+K+RNGFAKFFSR+K GI+LEI
Sbjct: 678  STSSATLNHMSSDKNRNGFAKFFSRSKDGIQLEI 711


>ref|XP_002302234.1| predicted protein [Populus trichocarpa] gi|222843960|gb|EEE81507.1|
            predicted protein [Populus trichocarpa]
          Length = 696

 Score =  277 bits (709), Expect = 5e-72
 Identities = 198/484 (40%), Positives = 262/484 (54%), Gaps = 16/484 (3%)
 Frame = -1

Query: 1489 SGERLTAVDSDIHKISGSEPNKYEPSCSDSWASALIAELDQFKNEKC--RQAPSSSVKID 1316
            SGE+L AV+ D  K+S SEP K E SC DSWAS LI+EL+QFKNEK   R  P+SSV+ID
Sbjct: 296  SGEKLNAVELDARKVSCSEPYKSEQSCLDSWASTLISELNQFKNEKSINRNLPASSVEID 355

Query: 1315 LMDDFLEMERLVALPEIKNESSAQES---VVANECTDKESSLRAEFEIMIQQMDELKEKL 1145
            LMDDFLEME+L AL E  NE+    S    V  +  D ESSL                  
Sbjct: 356  LMDDFLEMEQLAALSE--NETGTDNSKAEAVIKQSVDAESSL------------------ 395

Query: 1144 EKVEADKAELEIALMKSEEYIEESXXXXXXXXXXXXXXXXXXENAYKSKQKIENRLMSMD 965
                  +AELE+   ++ E  E+                          QK+E     ++
Sbjct: 396  ------RAELEVMAKRTAELEEKL-------------------------QKVEGEKFELE 424

Query: 964  AEAQTLSAXXXXXXXXXXXERAVSHEIAMKCKDLEEELGSKSAKLDLLEAEVDKERTMSH 785
             + Q +                          +LEE+L    A++D LE  +++ +  + 
Sbjct: 425  EKLQKVEGEKF---------------------ELEEKLERIKAEMDELEMALNESQDRNE 463

Query: 784  EIVIKCKDLEKELEGKSEKVGLLETEVAKERAMSDEITRKCKDLEEELESKSAKVDLLET 605
               ++  + +++L    E+  LL T  +K+     +I  +   +E E  + SAKV+ ++ 
Sbjct: 464  ASQLQLSEAQQKLVELQEE--LLLTNESKQ-----QIEFQLVSMEAEARTMSAKVNSIQG 516

Query: 604  EVDKERAMSEEIAMKCRELEEEI--------LRSTASSYGEKKIKQEDLALAAGKLAECQ 449
            E++KER +S EIA+K  ELEEE+        L+   SS GE KIKQED  +AA KLAECQ
Sbjct: 517  EIEKERVLSAEIALKYHELEEELSRKKQEEELQQNVSSSGEPKIKQEDFDVAANKLAECQ 576

Query: 448  KTIASLGNQLKSLATLEDFLIDTASIP---PSPSLIAQAGGEMWKLHSNDTFSPKRDSTS 278
            KTIASLGNQLKSLATL+DFLIDTASIP      S I +  GE WKLHSN+TFSPKRDS S
Sbjct: 577  KTIASLGNQLKSLATLKDFLIDTASIPEFSAGGSAIPKGNGEPWKLHSNETFSPKRDSGS 636

Query: 277  SKLLADGGSCSGPSSLNKNEECXXXXXXXXXXSAALPNHVNSEKSRNGFAKFFSRTKSGI 98
             ++       SGP ++  NE            SA   NHV+SEK+RNGFAKFFSR+K+GI
Sbjct: 637  LRI---DNENSGP-AVKINEGDSPPSVSSSASSAVSSNHVSSEKNRNGFAKFFSRSKNGI 692

Query: 97   RLEI 86
            +LEI
Sbjct: 693  QLEI 696


Top