BLASTX nr result

ID: Glycyrrhiza24_contig00023987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023987
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625979.1| INO80 complex subunit B [Medicago truncatula...   116   4e-24
ref|XP_003520755.1| PREDICTED: uncharacterized protein LOC100793...   110   3e-22
ref|XP_003554553.1| PREDICTED: uncharacterized protein LOC100814...   103   3e-20
ref|XP_002270857.2| PREDICTED: uncharacterized protein LOC100246...    71   3e-10
emb|CBI36960.3| unnamed protein product [Vitis vinifera]               71   3e-10

>ref|XP_003625979.1| INO80 complex subunit B [Medicago truncatula]
           gi|355500994|gb|AES82197.1| INO80 complex subunit B
           [Medicago truncatula]
          Length = 566

 Score =  116 bits (291), Expect = 4e-24
 Identities = 61/91 (67%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
 Frame = +1

Query: 412 MEDLGSTRFDGLSNAVXXXXXXXXXXXXXDSQPVPDPEGHDLSPSSSTPPSEDAGK--AS 585
           MEDLGSTRFDG+SNAV             DSQP+PDPEG D SPSSSTPPSE+A     S
Sbjct: 1   MEDLGSTRFDGISNAVRRKRSQTSRRPRPDSQPIPDPEGRDFSPSSSTPPSEEAADKVVS 60

Query: 586 SDDNGGYD-TNSKRKEFNLNHCVSQSSSATG 675
           SD+N GYD T SKRKEFNLNHCV+Q SSA G
Sbjct: 61  SDENDGYDNTGSKRKEFNLNHCVTQPSSAGG 91


>ref|XP_003520755.1| PREDICTED: uncharacterized protein LOC100793005 [Glycine max]
          Length = 587

 Score =  110 bits (275), Expect = 3e-22
 Identities = 61/90 (67%), Positives = 65/90 (72%)
 Frame = +1

Query: 412 MEDLGSTRFDGLSNAVXXXXXXXXXXXXXDSQPVPDPEGHDLSPSSSTPPSEDAGKASSD 591
           MEDLG T+FDGLSNAV             DSQ     EG +LSP SSTP SEDAGKASSD
Sbjct: 1   MEDLGGTQFDGLSNAVRRKRSQTSRRPRPDSQHAS--EGQELSPLSSTP-SEDAGKASSD 57

Query: 592 DNGGYDTNSKRKEFNLNHCVSQSSSATGAE 681
           +N GYD NSKRKEFNLNHCVSQ+SS TGAE
Sbjct: 58  ENVGYDANSKRKEFNLNHCVSQTSSGTGAE 87


>ref|XP_003554553.1| PREDICTED: uncharacterized protein LOC100814323 [Glycine max]
          Length = 573

 Score =  103 bits (258), Expect = 3e-20
 Identities = 58/88 (65%), Positives = 61/88 (69%)
 Frame = +1

Query: 412 MEDLGSTRFDGLSNAVXXXXXXXXXXXXXDSQPVPDPEGHDLSPSSSTPPSEDAGKASSD 591
           MEDLG TRFDGLSNAV             DSQ     EG +LSP SSTP SED GKASSD
Sbjct: 1   MEDLGGTRFDGLSNAVRRKRSQTSRRPRPDSQHAS--EGQELSPLSSTP-SEDTGKASSD 57

Query: 592 DNGGYDTNSKRKEFNLNHCVSQSSSATG 675
           +N GYD NSKRKEFNLNHCVSQ+SS  G
Sbjct: 58  ENVGYDANSKRKEFNLNHCVSQTSSDEG 85


>ref|XP_002270857.2| PREDICTED: uncharacterized protein LOC100246939 [Vitis vinifera]
          Length = 586

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 38/90 (42%), Positives = 49/90 (54%)
 Frame = +1

Query: 412 MEDLGSTRFDGLSNAVXXXXXXXXXXXXXDSQPVPDPEGHDLSPSSSTPPSEDAGKASSD 591
           ME+ G TR DG+ N V             +SQP  +   H     SSTPPS+D  K SSD
Sbjct: 1   MEEFGGTRLDGIGNTVRKKRSRASRRPRPESQPHTESWDH-----SSTPPSDDVCKVSSD 55

Query: 592 DNGGYDTNSKRKEFNLNHCVSQSSSATGAE 681
           +N   D +S+RKEFNLN C +++ S   AE
Sbjct: 56  ENAACDASSRRKEFNLNQCAAKAVSVGRAE 85


>emb|CBI36960.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 38/90 (42%), Positives = 49/90 (54%)
 Frame = +1

Query: 412 MEDLGSTRFDGLSNAVXXXXXXXXXXXXXDSQPVPDPEGHDLSPSSSTPPSEDAGKASSD 591
           ME+ G TR DG+ N V             +SQP  +   H     SSTPPS+D  K SSD
Sbjct: 1   MEEFGGTRLDGIGNTVRKKRSRASRRPRPESQPHTESWDH-----SSTPPSDDVCKVSSD 55

Query: 592 DNGGYDTNSKRKEFNLNHCVSQSSSATGAE 681
           +N   D +S+RKEFNLN C +++ S   AE
Sbjct: 56  ENAACDASSRRKEFNLNQCAAKAVSVGRAE 85


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