BLASTX nr result

ID: Glycyrrhiza24_contig00023985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023985
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528054.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
ref|XP_003602634.1| hypothetical protein MTR_3g096450 [Medicago ...    66   3e-09

>ref|XP_003528054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 737

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 49/87 (56%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
 Frame = +1

Query: 1   FPTSLDWMKRDKVQSGRSKVSPRPSFQESSMKQVDKDKWRIKRFF----STEDGVGQNNG 168
           FP SLDWMK+D+ ++G SKVS R S QES +KQV K+ WRIK+ F    + EDG+GQ NG
Sbjct: 646 FPISLDWMKKDRAKNG-SKVSSRSSLQES-IKQVGKE-WRIKKLFLSGDNREDGIGQKNG 702

Query: 169 GSSN-DKNRYVDRSFSFSNSCWPFFQY 246
           G  N D NRY   S S S+ CWPF  Y
Sbjct: 703 GRINSDINRYDHHSLSLSHGCWPFLPY 729


>ref|XP_003602634.1| hypothetical protein MTR_3g096450 [Medicago truncatula]
           gi|355491682|gb|AES72885.1| hypothetical protein
           MTR_3g096450 [Medicago truncatula]
          Length = 245

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/83 (46%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
 Frame = +1

Query: 1   FPTSLDWMKRD-KVQSGRSKVSPRPSFQESSMKQVDKDKWRIKRFFSTE---DGVGQNNG 168
           FP S DWMK+  KVQ+G            S ++Q DK+ WRIKRFFS +         + 
Sbjct: 159 FPISFDWMKKTTKVQNG------------SEVEQKDKE-WRIKRFFSEDRQNTSSSSTSR 205

Query: 169 GSSNDKNRYVDRSFSFSNSCWPF 237
            +SNDK+RYVDRSFS S  C+PF
Sbjct: 206 SNSNDKSRYVDRSFSLSEGCFPF 228


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