BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023973
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551782.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   359   2e-97
ref|XP_003530460.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   350   8e-95
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...   347   1e-93
emb|CAC95024.1| mitochondrial and plastid RNA polymerase [Nicoti...   347   1e-93
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...   345   4e-93

>ref|XP_003551782.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Glycine max]
          Length = 992

 Score =  359 bits (921), Expect = 2e-97
 Identities = 170/198 (85%), Positives = 178/198 (89%)
 Frame = -3

Query: 595  GGRLADLVDRDDVPLPEEPDTDDETXXXXXXXXXXXXXKENRERYSQRCDIELKLSVARK 416
            GGR+ADLVDRDDVPLP+EPDTDDE              KENRERYSQRCDIELKL+VARK
Sbjct: 498  GGRIADLVDRDDVPLPDEPDTDDEAKIKKWKWKYKSLQKENRERYSQRCDIELKLAVARK 557

Query: 415  MKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGLHWLKIHLAN 236
            MKDEEGFYYPHN+DFRGRAYPMHPHLNHLGSD+CRGILEFA+GR LGKSGL WLKIHLAN
Sbjct: 558  MKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRSLGKSGLRWLKIHLAN 617

Query: 235  LYAGGVDKLSLEGRVTFTENHFDDIFDSADKPLEGRRWWLNAEDPLQCLAACITLTEALR 56
            LYAGGVDKLS EGR+ FTENHF+DIFDSADKPLEGRRWWL AEDPLQCLA CITLTEALR
Sbjct: 618  LYAGGVDKLSYEGRLAFTENHFEDIFDSADKPLEGRRWWLKAEDPLQCLAVCITLTEALR 677

Query: 55   SSSPETFISHIPVHQDGS 2
            SSSPETFISHIPVHQDGS
Sbjct: 678  SSSPETFISHIPVHQDGS 695


>ref|XP_003530460.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Glycine max]
          Length = 1015

 Score =  350 bits (899), Expect = 8e-95
 Identities = 167/198 (84%), Positives = 177/198 (89%)
 Frame = -3

Query: 595  GGRLADLVDRDDVPLPEEPDTDDETXXXXXXXXXXXXXKENRERYSQRCDIELKLSVARK 416
            GGR+ADLVDRDDVPLP++P TDDE              KENRERYSQRCDIELKL+VARK
Sbjct: 521  GGRIADLVDRDDVPLPDKPVTDDEEKIKKWKWKCKSLQKENRERYSQRCDIELKLAVARK 580

Query: 415  MKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGLHWLKIHLAN 236
            MKDEEGFYYPHN+DFRGRAYPMHPHLNHLGSD+CRGILEFA+GR LGKSGL WLKIHLAN
Sbjct: 581  MKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRFLGKSGLQWLKIHLAN 640

Query: 235  LYAGGVDKLSLEGRVTFTENHFDDIFDSADKPLEGRRWWLNAEDPLQCLAACITLTEALR 56
            LYAGGVDKLS EGR+ FTENHF+DIFDSADKPL+GRRWWL AEDPLQCLA CITLTEALR
Sbjct: 641  LYAGGVDKLSHEGRLVFTENHFEDIFDSADKPLQGRRWWLKAEDPLQCLAVCITLTEALR 700

Query: 55   SSSPETFISHIPVHQDGS 2
            SSSPETFISHIPVHQDGS
Sbjct: 701  SSSPETFISHIPVHQDGS 718


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial; AltName:
            Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 2B; Flags: Precursor
            gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast
            RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score =  347 bits (889), Expect = 1e-93
 Identities = 162/198 (81%), Positives = 175/198 (88%)
 Frame = -3

Query: 595  GGRLADLVDRDDVPLPEEPDTDDETXXXXXXXXXXXXXKENRERYSQRCDIELKLSVARK 416
            GGRLADLVDRDD PLPEEPDT+DE              KENRER+SQRCDIELKL+VARK
Sbjct: 527  GGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARK 586

Query: 415  MKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGLHWLKIHLAN 236
            MKDEEGF+YPHNVDFRGRAYPMHPHLNHLGSD+CRG+L FA+GRPLG+SGL WLKIHLAN
Sbjct: 587  MKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLVFAEGRPLGESGLRWLKIHLAN 646

Query: 235  LYAGGVDKLSLEGRVTFTENHFDDIFDSADKPLEGRRWWLNAEDPLQCLAACITLTEALR 56
            L+AGGV+KLSLEGR+ FTENH DDIFDSADKPLEGRRWWLNAEDP QCLA CI L+EA+R
Sbjct: 647  LFAGGVEKLSLEGRIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVR 706

Query: 55   SSSPETFISHIPVHQDGS 2
            SSSPET ISHIPVHQDGS
Sbjct: 707  SSSPETSISHIPVHQDGS 724


>emb|CAC95024.1| mitochondrial and plastid RNA polymerase [Nicotiana tabacum]
          Length = 562

 Score =  347 bits (889), Expect = 1e-93
 Identities = 162/198 (81%), Positives = 175/198 (88%)
 Frame = -3

Query: 595 GGRLADLVDRDDVPLPEEPDTDDETXXXXXXXXXXXXXKENRERYSQRCDIELKLSVARK 416
           GGRLADLVDRDD PLPEEPDT+DE              KENRER+SQRCDIELKL+VARK
Sbjct: 223 GGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARK 282

Query: 415 MKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGLHWLKIHLAN 236
           MKDEEGF+YPHNVDFRGRAYPMHPHLNHLGSD+CRG+L FA+GRPLG+SGL WLKIHLAN
Sbjct: 283 MKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLVFAEGRPLGESGLRWLKIHLAN 342

Query: 235 LYAGGVDKLSLEGRVTFTENHFDDIFDSADKPLEGRRWWLNAEDPLQCLAACITLTEALR 56
           L+AGGV+KLSLEGR+ FTENH DDIFDSADKPLEGRRWWLNAEDP QCLA CI L+EA+R
Sbjct: 343 LFAGGVEKLSLEGRIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVR 402

Query: 55  SSSPETFISHIPVHQDGS 2
           SSSPET ISHIPVHQDGS
Sbjct: 403 SSSPETSISHIPVHQDGS 420


>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
            AltName: Full=T7 bacteriophage-type single subunit RNA
            polymerase 2; Flags: Precursor
            gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score =  345 bits (884), Expect = 4e-93
 Identities = 160/198 (80%), Positives = 175/198 (88%)
 Frame = -3

Query: 595  GGRLADLVDRDDVPLPEEPDTDDETXXXXXXXXXXXXXKENRERYSQRCDIELKLSVARK 416
            GGRLADLVDRDD PLPEEPDT+DE              KENRER+SQRCDIELKL+VARK
Sbjct: 526  GGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARK 585

Query: 415  MKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGLHWLKIHLAN 236
            MKDEE F+YPHNVDFRGRAYPMHPHLNHLGSD+CRG+LEFA+GRPLG+SGL WLKIHLAN
Sbjct: 586  MKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLAN 645

Query: 235  LYAGGVDKLSLEGRVTFTENHFDDIFDSADKPLEGRRWWLNAEDPLQCLAACITLTEALR 56
            L+AGGV+KLSLEGR+ FTENH DDIFDS+DKPLEGRRWWLNAEDP QCLA CI L+EA+R
Sbjct: 646  LFAGGVEKLSLEGRIGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVR 705

Query: 55   SSSPETFISHIPVHQDGS 2
            SSSPET +SHIPVHQDGS
Sbjct: 706  SSSPETSVSHIPVHQDGS 723