BLASTX nr result

ID: Glycyrrhiza24_contig00023970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023970
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597381.1| hypothetical protein MTR_2g097510 [Medicago ...    63   2e-08
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    58   7e-07
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    56   3e-06

>ref|XP_003597381.1| hypothetical protein MTR_2g097510 [Medicago truncatula]
           gi|355486429|gb|AES67632.1| hypothetical protein
           MTR_2g097510 [Medicago truncatula]
          Length = 244

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/72 (37%), Positives = 39/72 (54%)
 Frame = -3

Query: 436 LGLRSAYHINQASPMKVGWQIMTKRDNLWVKVVRAKYKCGLDLVPRIVSKKLASNLWRGI 257
           LGLRS   +N A  M+  W+  T+   +W  V+  KYKCG  L+P +   K  SN WRG+
Sbjct: 10  LGLRSMRQVNVAYMMRANWRFCTQLKQMWTSVILKKYKCGSSLLPMVNVDKPGSNFWRGL 69

Query: 256 CNSWDSVNKNLV 221
           C   + +N   +
Sbjct: 70  CVQVEELNSGRI 81


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
 Frame = -3

Query: 439  GLGLRSAYHINQASPMKVGWQIMTKRDNLWVKVVRAKY---KCGLDLVPRIVSKKLASNL 269
            GLG+RS    N A  +K+GW+++ +  +LW +++RAKY   +C +D+      K  AS+ 
Sbjct: 858  GLGIRSMRQANSAFLVKLGWRLLAEPSSLWSRILRAKYCDNRCDIDM---FKEKSNASST 914

Query: 268  WRGICNSWDSVNKNL 224
            WRGI +S D V K +
Sbjct: 915  WRGILSSIDVVRKGI 929


>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/73 (34%), Positives = 42/73 (57%)
 Frame = -3

Query: 439 GLGLRSAYHINQASPMKVGWQIMTKRDNLWVKVVRAKYKCGLDLVPRIVSKKLASNLWRG 260
           GLG +  +H+N+A  MK+ W ++ + D LW +V+ +KY    DL   I S+   S LW+ 
Sbjct: 282 GLGFKRPHHMNEAFLMKMLWNLIKQPDKLWCRVLYSKYGRNNDLNNNISSQPYDSPLWKA 341

Query: 259 ICNSWDSVNKNLV 221
           I   WD   ++++
Sbjct: 342 IVGIWDDFKRHVI 354


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