BLASTX nr result

ID: Glycyrrhiza24_contig00023964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023964
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592348.1| hypothetical protein MTR_1g101910 [Medicago ...   118   6e-25
ref|XP_003533238.1| PREDICTED: uncharacterized protein LOC100795...   115   5e-24
ref|XP_003549129.1| PREDICTED: uncharacterized protein LOC100791...   113   2e-23
ref|XP_002321872.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
ref|XP_002318849.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21

>ref|XP_003592348.1| hypothetical protein MTR_1g101910 [Medicago truncatula]
           gi|355481396|gb|AES62599.1| hypothetical protein
           MTR_1g101910 [Medicago truncatula]
          Length = 642

 Score =  118 bits (295), Expect = 6e-25
 Identities = 69/105 (65%), Positives = 81/105 (77%), Gaps = 2/105 (1%)
 Frame = +3

Query: 3   RPRQHIQIMKHRHSTDSNTGMRSLPETPARMSSARRSDVEHRLSLQINKENYI--DNLEA 176
           RP+Q I+IMKHRHSTDS      + +TP  +SS R S VEHRLSLQINKEN    ++LE 
Sbjct: 156 RPKQDIKIMKHRHSTDS------VIKTPT-LSSERTSYVEHRLSLQINKENMNLGEDLET 208

Query: 177 PRFSFSKRNKYDDNSNISRSPSHYARQIVKQVKESVSRKVGLDIT 311
           PR SFSKR  +D+N+   RSPSHYARQIVKQVKES+SRKVG+DIT
Sbjct: 209 PRSSFSKRKFFDENN--CRSPSHYARQIVKQVKESMSRKVGMDIT 251


>ref|XP_003533238.1| PREDICTED: uncharacterized protein LOC100795947 [Glycine max]
          Length = 822

 Score =  115 bits (287), Expect = 5e-24
 Identities = 74/109 (67%), Positives = 85/109 (77%), Gaps = 6/109 (5%)
 Frame = +3

Query: 3   RPRQHIQIMKHRHSTDSN--TGMRSLPETPARMSSARRSDVEH--RLSLQINKENYI--D 164
           R +QH+Q  KHR+S DS+     RSLPETP R+SSARRSDV+H  RLSLQINKEN    +
Sbjct: 241 RHKQHVQT-KHRNSIDSSDIASTRSLPETP-RISSARRSDVDHHHRLSLQINKENMNLGE 298

Query: 165 NLEAPRFSFSKRNKYDDNSNISRSPSHYARQIVKQVKESVSRKVGLDIT 311
           +LE PR SFSKR K D+N+   RSPS+YARQIVKQVKESVSRKVG DIT
Sbjct: 299 DLELPRLSFSKR-KSDENNG--RSPSYYARQIVKQVKESVSRKVGQDIT 344


>ref|XP_003549129.1| PREDICTED: uncharacterized protein LOC100791539 [Glycine max]
          Length = 750

 Score =  113 bits (282), Expect = 2e-23
 Identities = 73/109 (66%), Positives = 84/109 (77%), Gaps = 6/109 (5%)
 Frame = +3

Query: 3   RPRQHIQIMKHRHSTDSN--TGMRSLPETPARMSSARRSDVEH--RLSLQINKENYI--D 164
           R +QH+Q  KHR+S DS+  +  RSLPETP R+SSARRSDV+H  RLSLQI KEN    +
Sbjct: 183 RHKQHVQT-KHRNSVDSSDISATRSLPETP-RISSARRSDVDHHHRLSLQIIKENMNLGE 240

Query: 165 NLEAPRFSFSKRNKYDDNSNISRSPSHYARQIVKQVKESVSRKVGLDIT 311
           +LE PR SFSKR K D+N+   RSPSHYARQIVKQ KESVSRKVG DIT
Sbjct: 241 DLELPRLSFSKR-KSDENNG--RSPSHYARQIVKQAKESVSRKVGQDIT 286


>ref|XP_002321872.1| predicted protein [Populus trichocarpa] gi|222868868|gb|EEF05999.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score =  108 bits (271), Expect = 3e-22
 Identities = 63/87 (72%), Positives = 69/87 (79%), Gaps = 2/87 (2%)
 Frame = +3

Query: 57  TGMRSLPETPARMSSARRSDVEHRLSLQINKENYIDNLEAPRFSFSKRN--KYDDNSNIS 230
           +G RSLPETP R+SSARRSDVEHRLSLQINKEN  +NL  PRFS  KR   K +D    +
Sbjct: 207 SGTRSLPETP-RISSARRSDVEHRLSLQINKENAGENLVLPRFSSLKRKELKVEDE---N 262

Query: 231 RSPSHYARQIVKQVKESVSRKVGLDIT 311
           RSP H+ARQIVKQVKESVSRK GLDIT
Sbjct: 263 RSPGHFARQIVKQVKESVSRKAGLDIT 289


>ref|XP_002318849.1| predicted protein [Populus trichocarpa] gi|222859522|gb|EEE97069.1|
           predicted protein [Populus trichocarpa]
          Length = 733

 Score =  105 bits (262), Expect = 4e-21
 Identities = 66/108 (61%), Positives = 75/108 (69%), Gaps = 5/108 (4%)
 Frame = +3

Query: 3   RPRQ----HIQIMKHRHSTDSN-TGMRSLPETPARMSSARRSDVEHRLSLQINKENYIDN 167
           RP+Q    H +    R   D + +G RSLPETP R+SSARRSDVEHRLSLQINKEN  ++
Sbjct: 179 RPQQPRPLHSKTSSPRSCLDHDFSGTRSLPETP-RISSARRSDVEHRLSLQINKENVSED 237

Query: 168 LEAPRFSFSKRNKYDDNSNISRSPSHYARQIVKQVKESVSRKVGLDIT 311
           L   R S  KR +       +RSP HYARQIVKQVKESVSRKVGLDIT
Sbjct: 238 LALSRLSSLKRIELKVEEE-NRSPGHYARQIVKQVKESVSRKVGLDIT 284


Top