BLASTX nr result

ID: Glycyrrhiza24_contig00023957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023957
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157159.1| PREDICTED: endoribonuclease Dicer homolog 2-...    77   2e-12
ref|XP_004139098.1| PREDICTED: endoribonuclease Dicer homolog 2-...    77   2e-12
ref|XP_002514810.1| ATP binding protein, putative [Ricinus commu...    72   5e-11
ref|XP_003553782.1| PREDICTED: endoribonuclease Dicer homolog 2-...    70   1e-10
emb|CAN77284.1| hypothetical protein VITISV_043738 [Vitis vinifera]    70   1e-10

>ref|XP_004157159.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
          Length = 132

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/77 (51%), Positives = 51/77 (66%)
 Frame = +2

Query: 2   PLVTPETAKQHPIRELKELCQKEHYKMEETVVSHDNGVTSVTIEVKVERXXXXXXXXXXX 181
           PLV+PET K+HP REL ELCQKE+YK+++TV S  NG + VT+EV+V             
Sbjct: 48  PLVSPETLKKHPRRELNELCQKENYKLKKTVTSRVNGRSYVTVEVEVNGRIFKHTEISLD 107

Query: 182 XXXXQKLASKEVLKLLK 232
               +K+ASKEVLK LK
Sbjct: 108 RETGEKVASKEVLKSLK 124


>ref|XP_004139098.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
          Length = 1393

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/77 (51%), Positives = 51/77 (66%)
 Frame = +2

Query: 2    PLVTPETAKQHPIRELKELCQKEHYKMEETVVSHDNGVTSVTIEVKVERXXXXXXXXXXX 181
            PLV+PET K+HP REL ELCQKE+YK+++TV S  NG + VT+EV+V             
Sbjct: 1309 PLVSPETLKKHPRRELNELCQKENYKLKKTVTSRVNGRSYVTVEVEVNGRIFKHTEISLD 1368

Query: 182  XXXXQKLASKEVLKLLK 232
                +K+ASKEVLK LK
Sbjct: 1369 RETGEKVASKEVLKSLK 1385


>ref|XP_002514810.1| ATP binding protein, putative [Ricinus communis]
            gi|223545861|gb|EEF47364.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1388

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/77 (45%), Positives = 48/77 (62%)
 Frame = +2

Query: 2    PLVTPETAKQHPIRELKELCQKEHYKMEETVVSHDNGVTSVTIEVKVERXXXXXXXXXXX 181
            PL+TPET + HP REL ELCQK+H+   + VVS +NG++ VT+EV+              
Sbjct: 1306 PLITPETIRLHPTRELTELCQKQHFDRRKPVVSRNNGMSCVTVEVEANGVVFKHTSAAAE 1365

Query: 182  XXXXQKLASKEVLKLLK 232
                ++LASKEVL+ LK
Sbjct: 1366 RKTAKRLASKEVLRALK 1382


>ref|XP_003553782.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 756

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 41/84 (48%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
 Frame = +2

Query: 2   PLVTPETAKQHPIRELKELCQKEHYKMEETVVSHDNGVTSVTIEVKVE--RXXXXXXXXX 175
           PLVTPETA++HPI EL ELCQK+ YKM+       NG TSVTIEVK              
Sbjct: 672 PLVTPETARRHPISELHELCQKKGYKMKVYPPVRVNGETSVTIEVKTNGITYKNNPPAKA 731

Query: 176 XXXXXXQKLASKEVLKLLKPCNSI 247
                 +KLA+K+VLK +K C S+
Sbjct: 732 SNNDTARKLAAKDVLKQIKICKSL 755


>emb|CAN77284.1| hypothetical protein VITISV_043738 [Vitis vinifera]
          Length = 1296

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 42/77 (54%), Positives = 46/77 (59%)
 Frame = +2

Query: 2    PLVTPETAKQHPIRELKELCQKEHYKMEETVVSHDNGVTSVTIEVKVERXXXXXXXXXXX 181
            PL+TPET K HP REL ELCQKEHY ++  VVS  NG  SVTIEV+              
Sbjct: 1214 PLITPETVKLHPARELXELCQKEHYXIKRVVVS-QNGKASVTIEVEA-NGAKHKHTSTSD 1271

Query: 182  XXXXQKLASKEVLKLLK 232
                 KLASKEVLK LK
Sbjct: 1272 KRTAXKLASKEVLKSLK 1288


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