BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023948
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containi...   257   6e-67
ref|XP_003617444.1| Pentatricopeptide repeat-containing protein ...   235   3e-60
ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi...   223   2e-56
ref|XP_002306741.1| predicted protein [Populus trichocarpa] gi|2...   217   7e-55
ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containi...   216   1e-54

>ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Glycine max]
          Length = 534

 Score =  257 bits (657), Expect = 6e-67
 Identities = 133/158 (84%), Positives = 140/158 (88%)
 Frame = +2

Query: 2   PRPVSLYSWNTIIRAFSRSSAPHFAISLFVDMLQCEPKVQPQRLTYPSVFKAYAQLGAGQ 181
           P P +LY WNTIIR FSRSS PH AISLFVDML C   V PQRLTYPSVFKAYAQLGAG 
Sbjct: 85  PSP-NLYCWNTIIRGFSRSSTPHLAISLFVDML-CS-SVLPQRLTYPSVFKAYAQLGAGY 141

Query: 182 DGAQLHGRVVKLGLQKDQFISNTIIYMYADSGLLSEARRVFDEHMGLDVVACNSMIMGLA 361
           DGAQLHGRVVKLGL+KDQFI NTIIYMYA+SGLLSEARRVFDE + LDVVACNSMIMGLA
Sbjct: 142 DGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVVACNSMIMGLA 201

Query: 362 KCGEIDESRRLFDEMPTRTAVTWNSMISGYVRNGKLME 475
           KCGE+D+SRRLFD MPTRT VTWNSMISGYVRN +LME
Sbjct: 202 KCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLME 239


>ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355518779|gb|AET00403.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 542

 Score =  235 bits (599), Expect = 3e-60
 Identities = 126/162 (77%), Positives = 134/162 (82%), Gaps = 4/162 (2%)
 Frame = +2

Query: 2   PRPVSLYSWNTIIRAFSRSSAPHFAISLFVDMLQCEPKVQPQRLTYPSVFKAYAQLGAGQ 181
           P P +LYSWNTIIRAFSRSS P FAISLFVDML  +  +QPQ LTYPSVFKAYAQLG   
Sbjct: 88  PNP-NLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQ--IQPQYLTYPSVFKAYAQLGHAH 144

Query: 182 DGAQLHGRVVKLGLQKDQFISNTIIYMYADSGLLSEARRVFD----EHMGLDVVACNSMI 349
            GAQLHGRVVKLGLQ DQFI NTIIYMYA+ GL+SEARRVFD    E    DVVA NSMI
Sbjct: 145 YGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMI 204

Query: 350 MGLAKCGEIDESRRLFDEMPTRTAVTWNSMISGYVRNGKLME 475
           MG AKCGEIDESR LFD+M TRT+V+WNSMISGYVRNGKLME
Sbjct: 205 MGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLME 246


>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Vitis vinifera]
           gi|302143555|emb|CBI22116.3| unnamed protein product
           [Vitis vinifera]
          Length = 533

 Score =  223 bits (567), Expect = 2e-56
 Identities = 112/154 (72%), Positives = 124/154 (80%)
 Frame = +2

Query: 14  SLYSWNTIIRAFSRSSAPHFAISLFVDMLQCEPKVQPQRLTYPSVFKAYAQLGAGQDGAQ 193
           +L+SWNTIIR FS+SS PH AISLF+DML     VQP RLTYPSVFKAYAQLG    GAQ
Sbjct: 88  NLFSWNTIIRGFSQSSTPHHAISLFIDMLIVS-SVQPHRLTYPSVFKAYAQLGLAHYGAQ 146

Query: 194 LHGRVVKLGLQKDQFISNTIIYMYADSGLLSEARRVFDEHMGLDVVACNSMIMGLAKCGE 373
           LHGRV+KLGLQ D FI NTIIYMYA+ G LSE  + F E M  D+VA NSMIMGLAKCGE
Sbjct: 147 LHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNSMIMGLAKCGE 206

Query: 374 IDESRRLFDEMPTRTAVTWNSMISGYVRNGKLME 475
           +DESR+LFDEMP R  V+WNSMISGYVRNG+L E
Sbjct: 207 VDESRKLFDEMPLRNTVSWNSMISGYVRNGRLRE 240



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 40/128 (31%), Positives = 69/128 (53%)
 Frame = +2

Query: 23  SWNTIIRAFSRSSAPHFAISLFVDMLQCEPKVQPQRLTYPSVFKAYAQLGAGQDGAQLHG 202
           SWN++I  + R+     A+ LF  M   E +++P   T  S+  A A+LGA + G  +H 
Sbjct: 224 SWNSMISGYVRNGRLREALDLFGQMQ--EERIKPSEFTMVSLLNASARLGALKQGEWIHD 281

Query: 203 RVVKLGLQKDQFISNTIIYMYADSGLLSEARRVFDEHMGLDVVACNSMIMGLAKCGEIDE 382
            + K   + +  ++ +II MY   G + EA +VF+      + + N+MI+GLA  G  +E
Sbjct: 282 YIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVFEMAPLKGLSSWNTMILGLAMNGCENE 341

Query: 383 SRRLFDEM 406
           + +LF  +
Sbjct: 342 AIQLFSRL 349


>ref|XP_002306741.1| predicted protein [Populus trichocarpa] gi|222856190|gb|EEE93737.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  217 bits (553), Expect = 7e-55
 Identities = 105/157 (66%), Positives = 123/157 (78%)
 Frame = +2

Query: 5   RPVSLYSWNTIIRAFSRSSAPHFAISLFVDMLQCEPKVQPQRLTYPSVFKAYAQLGAGQD 184
           R  +L+ WNTIIR FS+SS PH AISLF+DM+   P  QPQRLTYPSVFKAYAQLG   +
Sbjct: 56  RNPNLFVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHE 115

Query: 185 GAQLHGRVVKLGLQKDQFISNTIIYMYADSGLLSEARRVFDEHMGLDVVACNSMIMGLAK 364
           GAQLHGRV+KLGL+ DQFI NTI+ MY + G L EA+R+FD   G DVV  N+MI+GLAK
Sbjct: 116 GAQLHGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAK 175

Query: 365 CGEIDESRRLFDEMPTRTAVTWNSMISGYVRNGKLME 475
           CGEID+SRRLFD+M  R  V+WNSMISGYVR G+  E
Sbjct: 176 CGEIDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFE 212



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 41/128 (32%), Positives = 64/128 (50%)
 Frame = +2

Query: 23  SWNTIIRAFSRSSAPHFAISLFVDMLQCEPKVQPQRLTYPSVFKAYAQLGAGQDGAQLHG 202
           SWN++I  + R      A+ LF  M   E  ++P   T  S+  A A LGA + G  +H 
Sbjct: 196 SWNSMISGYVRKGRFFEAMELFSRMQ--EEGIKPSEFTMVSLLNACACLGALRQGEWIHD 253

Query: 203 RVVKLGLQKDQFISNTIIYMYADSGLLSEARRVFDEHMGLDVVACNSMIMGLAKCGEIDE 382
            +VK     +  +   II MY+  G + +A +VF       +   NS+I+GLA  G  +E
Sbjct: 254 YIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWNSLILGLAMSGRGNE 313

Query: 383 SRRLFDEM 406
           + RLF ++
Sbjct: 314 AVRLFSKL 321


>ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Cucumis sativus]
           gi|449530724|ref|XP_004172343.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Cucumis sativus]
          Length = 543

 Score =  216 bits (551), Expect = 1e-54
 Identities = 102/154 (66%), Positives = 125/154 (81%)
 Frame = +2

Query: 14  SLYSWNTIIRAFSRSSAPHFAISLFVDMLQCEPKVQPQRLTYPSVFKAYAQLGAGQDGAQ 193
           +L+SWNT+IR FS+SS P  A+ LF+DML    +V+PQRLTYPS+FKAY+QLG   DGAQ
Sbjct: 87  NLFSWNTVIRGFSQSSNPQIALYLFIDML-VSSQVEPQRLTYPSIFKAYSQLGLAHDGAQ 145

Query: 194 LHGRVVKLGLQKDQFISNTIIYMYADSGLLSEARRVFDEHMGLDVVACNSMIMGLAKCGE 373
           LHGR++KLGLQ D FI NTI+YMYA  G LSEARR+F++ M  DVV+ NSMI+GLAKCGE
Sbjct: 146 LHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLAKCGE 205

Query: 374 IDESRRLFDEMPTRTAVTWNSMISGYVRNGKLME 475
           IDESR+LFD+MP +  ++WNSMI GYVRNG   E
Sbjct: 206 IDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKE 239



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/116 (34%), Positives = 61/116 (52%)
 Frame = +2

Query: 23  SWNTIIRAFSRSSAPHFAISLFVDMLQCEPKVQPQRLTYPSVFKAYAQLGAGQDGAQLHG 202
           SWN++I  + R+     A+ LF+ M   E ++QP   T  S+  A AQ+GA + G  +H 
Sbjct: 223 SWNSMIGGYVRNGMFKEALKLFIKMQ--EERIQPSEFTMVSLLNASAQIGALRQGVWIHE 280

Query: 203 RVVKLGLQKDQFISNTIIYMYADSGLLSEARRVFDEHMGLDVVACNSMIMGLAKCG 370
            + K  LQ +  +   II MY   G +  A +VF++     + + NSMI GLA  G
Sbjct: 281 YIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPCRSLSSWNSMIFGLAVNG 336