BLASTX nr result

ID: Glycyrrhiza24_contig00023928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023928
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554305.1| PREDICTED: ABC transporter C family member 5...    69   1e-10
ref|XP_003521316.1| PREDICTED: ABC transporter C family member 5...    70   4e-10
ref|XP_003625394.1| ABC transporter C family member [Medicago tr...    67   2e-09
emb|CBX25010.1| multidrug resistance-associated protein 1 [Phase...    60   2e-07

>ref|XP_003554305.1| PREDICTED: ABC transporter C family member 5-like [Glycine max]
          Length = 1537

 Score = 69.3 bits (168), Expect(2) = 1e-10
 Identities = 39/52 (75%), Positives = 41/52 (78%)
 Frame = +1

Query: 439 NVVNGNASFDGETRDVRRIGTWYFKLSVLSCFYVLMVQVLVLGFDGAALIRG 594
           N   G  S D ETRD+R I TW FKLSVLSCFYVL+VQVLVLGFDG ALIRG
Sbjct: 77  NASPGCVSVDLETRDIR-IETW-FKLSVLSCFYVLLVQVLVLGFDGVALIRG 126



 Score = 21.9 bits (45), Expect(2) = 1e-10
 Identities = 10/33 (30%), Positives = 13/33 (39%)
 Frame = +3

Query: 315 PWIAPIGACGNLCQLDSSSSVSGQRDIRVCCWG 413
           P +  +  C NL        V   R + VC WG
Sbjct: 33  PLLELVAICANLTLFILFLVVVSARKVLVCVWG 65


>ref|XP_003521316.1| PREDICTED: ABC transporter C family member 5-like [Glycine max]
          Length = 1539

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 38/52 (73%), Positives = 40/52 (76%)
 Frame = +1

Query: 439 NVVNGNASFDGETRDVRRIGTWYFKLSVLSCFYVLMVQVLVLGFDGAALIRG 594
           N   G  S D ETRDV RI TW FKLSVLSC YVL+VQVL+LGFDG ALIRG
Sbjct: 74  NASPGCVSVDLETRDVVRIETW-FKLSVLSCLYVLLVQVLLLGFDGVALIRG 124


>ref|XP_003625394.1| ABC transporter C family member [Medicago truncatula]
           gi|355500409|gb|AES81612.1| ABC transporter C family
           member [Medicago truncatula]
          Length = 1540

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 48/96 (50%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
 Frame = +1

Query: 313 ILGLPLLEXXXXXXXXXXXXXXXXREIXXXXXXXXXXXXNKDN---VVNGNASFDGETRD 483
           ILGLP+LE                RE             + DN   VV GN    GET D
Sbjct: 26  ILGLPVLELVAICTNLAVLVLFLLREFFFCVGGRVWFIKDNDNNVVVVVGN----GETFD 81

Query: 484 VRRIGTWYFKLSVLSCFYVLMVQVLVLGFDGAALIR 591
           VR IGTW FKLSV SC YVL+VQVLVLGFDG ALI+
Sbjct: 82  VR-IGTW-FKLSVFSCLYVLLVQVLVLGFDGFALIK 115


>emb|CBX25010.1| multidrug resistance-associated protein 1 [Phaseolus vulgaris]
          Length = 1538

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/51 (68%), Positives = 36/51 (70%)
 Frame = +1

Query: 439 NVVNGNASFDGETRDVRRIGTWYFKLSVLSCFYVLMVQVLVLGFDGAALIR 591
           N   G  S D ETRDVR IGTW FK SV SCFYVL+VQVLV  FDG AL R
Sbjct: 78  NASRGCDSVDLETRDVR-IGTW-FKWSVFSCFYVLLVQVLVFAFDGFALFR 126


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