BLASTX nr result
ID: Glycyrrhiza24_contig00023919
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00023919 (389 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003601957.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 65 4e-16 ref|XP_003625380.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 59 2e-15 ref|XP_003610958.1| F-box family protein [Medicago truncatula] g... 54 6e-14 ref|XP_003622277.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 60 3e-13 ref|XP_003589995.1| F-box/LRR-repeat protein [Medicago truncatul... 53 6e-13 >ref|XP_003601957.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355491005|gb|AES72208.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 457 Score = 64.7 bits (156), Expect(2) = 4e-16 Identities = 33/60 (55%), Positives = 38/60 (63%), Gaps = 5/60 (8%) Frame = -2 Query: 385 PKLQNLTILDLSDTVSG-----EWEEPQTVAECLSSHLRTCCLVNYKGWNSELKFAKYIM 221 PKLQ L I D D V+ +WE+P V ECL SHLRTC L+NY N E +FAKYIM Sbjct: 354 PKLQTLIIHDDDDIVNSSDDDEDWEDPTIVPECLLSHLRTCSLINYSRINCEFQFAKYIM 413 Score = 44.7 bits (104), Expect(2) = 4e-16 Identities = 24/48 (50%), Positives = 32/48 (66%) Frame = -1 Query: 173 MQNSKVLHSLTIKSTWDVDPDIETEDKLYMLMKLSLCQRGSATCKLLF 30 MQNS+VL ++TI+S +E K M M+LSLC + SATC+LLF Sbjct: 413 MQNSRVLRTMTIQSA----KSLECNTKHQMFMELSLCPKVSATCQLLF 456 >ref|XP_003625380.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355500395|gb|AES81598.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 391 Score = 58.5 bits (140), Expect(2) = 2e-15 Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 3/58 (5%) Frame = -2 Query: 385 PKLQNLTILD---LSDTVSGEWEEPQTVAECLSSHLRTCCLVNYKGWNSELKFAKYIM 221 PKLQNLTI D + + + W++P V ECLSS L+TC + YKG +L+F KYIM Sbjct: 290 PKLQNLTIQDNKAIEEAIDECWKDPPIVPECLSSQLKTCHIRVYKGTKYDLEFTKYIM 347 Score = 48.1 bits (113), Expect(2) = 2e-15 Identities = 26/49 (53%), Positives = 34/49 (69%) Frame = -1 Query: 173 MQNSKVLHSLTIKSTWDVDPDIETEDKLYMLMKLSLCQRGSATCKLLFN 27 M+NSKVL ++TI ST +D ++ K +LMKLS RGS TCKLLF+ Sbjct: 347 MENSKVLETMTINSTRSLDMNV----KYQLLMKLSSYTRGSTTCKLLFD 391 >ref|XP_003610958.1| F-box family protein [Medicago truncatula] gi|355512293|gb|AES93916.1| F-box family protein [Medicago truncatula] Length = 386 Score = 53.9 bits (128), Expect(2) = 6e-14 Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 4/60 (6%) Frame = -2 Query: 388 CPKLQNLTI---LDLSDTVSGE-WEEPQTVAECLSSHLRTCCLVNYKGWNSELKFAKYIM 221 C KLQNLT+ D + E W++PQ +ECLS+ LRT L NY G + E +FAKYIM Sbjct: 280 CHKLQNLTLCKNFKCVDEIGKEHWKDPQIDSECLSTQLRTFTLKNYIGLSCEAQFAKYIM 339 Score = 48.1 bits (113), Expect(2) = 6e-14 Identities = 26/49 (53%), Positives = 33/49 (67%) Frame = -1 Query: 173 MQNSKVLHSLTIKSTWDVDPDIETEDKLYMLMKLSLCQRGSATCKLLFN 27 MQ SKVL ++TI+ST ++DP+ ML SLC RGSATCKL F+ Sbjct: 339 MQKSKVLQNMTIQSTLNIDPEHP------MLETFSLCPRGSATCKLHFD 381 >ref|XP_003622277.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355497292|gb|AES78495.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 356 Score = 60.1 bits (144), Expect(2) = 3e-13 Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 4/60 (6%) Frame = -2 Query: 388 CPKLQNLTI----LDLSDTVSGEWEEPQTVAECLSSHLRTCCLVNYKGWNSELKFAKYIM 221 CPKLQNLTI D + +W + V EC SS L+TC L+ YKG N + +FAKYI+ Sbjct: 254 CPKLQNLTIHEGSSDRNKIEDVDWMDTPIVPECFSSQLKTCSLIGYKGMNCDFQFAKYIL 313 Score = 39.7 bits (91), Expect(2) = 3e-13 Identities = 19/49 (38%), Positives = 33/49 (67%) Frame = -1 Query: 173 MQNSKVLHSLTIKSTWDVDPDIETEDKLYMLMKLSLCQRGSATCKLLFN 27 ++N+KVL ++TI ++ ++ K +L+KL+LC RGS TCK+ F+ Sbjct: 313 LKNAKVLQTMTINAS-----PVDINIKHQILIKLTLCPRGSTTCKISFD 356 >ref|XP_003589995.1| F-box/LRR-repeat protein [Medicago truncatula] gi|355479043|gb|AES60246.1| F-box/LRR-repeat protein [Medicago truncatula] Length = 450 Score = 53.1 bits (126), Expect(2) = 6e-13 Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Frame = -2 Query: 385 PKLQNLTI--LDLSDTVSGE-WEEPQTVAECLSSHLRTCCLVNYKGWNSELKFAKYIM 221 PKLQ L I +D+ + WE+P+ V CL SHL TC L NY N EL FA+YIM Sbjct: 349 PKLQTLIIEEVDIVHNFGDKGWEDPKVVPRCLLSHLTTCSLRNYSRINCELPFARYIM 406 Score = 45.4 bits (106), Expect(2) = 6e-13 Identities = 24/48 (50%), Positives = 32/48 (66%) Frame = -1 Query: 173 MQNSKVLHSLTIKSTWDVDPDIETEDKLYMLMKLSLCQRGSATCKLLF 30 MQNS++L ++TI+S +D T KL M M+L LC R S TC+LLF Sbjct: 406 MQNSRILRTMTIQSAEFLD----TNTKLQMFMELYLCPRNSITCQLLF 449