BLASTX nr result

ID: Glycyrrhiza24_contig00023919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023919
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601957.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    65   4e-16
ref|XP_003625380.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    59   2e-15
ref|XP_003610958.1| F-box family protein [Medicago truncatula] g...    54   6e-14
ref|XP_003622277.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    60   3e-13
ref|XP_003589995.1| F-box/LRR-repeat protein [Medicago truncatul...    53   6e-13

>ref|XP_003601957.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355491005|gb|AES72208.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 457

 Score = 64.7 bits (156), Expect(2) = 4e-16
 Identities = 33/60 (55%), Positives = 38/60 (63%), Gaps = 5/60 (8%)
 Frame = -2

Query: 385 PKLQNLTILDLSDTVSG-----EWEEPQTVAECLSSHLRTCCLVNYKGWNSELKFAKYIM 221
           PKLQ L I D  D V+      +WE+P  V ECL SHLRTC L+NY   N E +FAKYIM
Sbjct: 354 PKLQTLIIHDDDDIVNSSDDDEDWEDPTIVPECLLSHLRTCSLINYSRINCEFQFAKYIM 413



 Score = 44.7 bits (104), Expect(2) = 4e-16
 Identities = 24/48 (50%), Positives = 32/48 (66%)
 Frame = -1

Query: 173 MQNSKVLHSLTIKSTWDVDPDIETEDKLYMLMKLSLCQRGSATCKLLF 30
           MQNS+VL ++TI+S       +E   K  M M+LSLC + SATC+LLF
Sbjct: 413 MQNSRVLRTMTIQSA----KSLECNTKHQMFMELSLCPKVSATCQLLF 456


>ref|XP_003625380.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355500395|gb|AES81598.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 391

 Score = 58.5 bits (140), Expect(2) = 2e-15
 Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
 Frame = -2

Query: 385 PKLQNLTILD---LSDTVSGEWEEPQTVAECLSSHLRTCCLVNYKGWNSELKFAKYIM 221
           PKLQNLTI D   + + +   W++P  V ECLSS L+TC +  YKG   +L+F KYIM
Sbjct: 290 PKLQNLTIQDNKAIEEAIDECWKDPPIVPECLSSQLKTCHIRVYKGTKYDLEFTKYIM 347



 Score = 48.1 bits (113), Expect(2) = 2e-15
 Identities = 26/49 (53%), Positives = 34/49 (69%)
 Frame = -1

Query: 173 MQNSKVLHSLTIKSTWDVDPDIETEDKLYMLMKLSLCQRGSATCKLLFN 27
           M+NSKVL ++TI ST  +D ++    K  +LMKLS   RGS TCKLLF+
Sbjct: 347 MENSKVLETMTINSTRSLDMNV----KYQLLMKLSSYTRGSTTCKLLFD 391


>ref|XP_003610958.1| F-box family protein [Medicago truncatula]
           gi|355512293|gb|AES93916.1| F-box family protein
           [Medicago truncatula]
          Length = 386

 Score = 53.9 bits (128), Expect(2) = 6e-14
 Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
 Frame = -2

Query: 388 CPKLQNLTI---LDLSDTVSGE-WEEPQTVAECLSSHLRTCCLVNYKGWNSELKFAKYIM 221
           C KLQNLT+       D +  E W++PQ  +ECLS+ LRT  L NY G + E +FAKYIM
Sbjct: 280 CHKLQNLTLCKNFKCVDEIGKEHWKDPQIDSECLSTQLRTFTLKNYIGLSCEAQFAKYIM 339



 Score = 48.1 bits (113), Expect(2) = 6e-14
 Identities = 26/49 (53%), Positives = 33/49 (67%)
 Frame = -1

Query: 173 MQNSKVLHSLTIKSTWDVDPDIETEDKLYMLMKLSLCQRGSATCKLLFN 27
           MQ SKVL ++TI+ST ++DP+        ML   SLC RGSATCKL F+
Sbjct: 339 MQKSKVLQNMTIQSTLNIDPEHP------MLETFSLCPRGSATCKLHFD 381


>ref|XP_003622277.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355497292|gb|AES78495.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 356

 Score = 60.1 bits (144), Expect(2) = 3e-13
 Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
 Frame = -2

Query: 388 CPKLQNLTI----LDLSDTVSGEWEEPQTVAECLSSHLRTCCLVNYKGWNSELKFAKYIM 221
           CPKLQNLTI     D +     +W +   V EC SS L+TC L+ YKG N + +FAKYI+
Sbjct: 254 CPKLQNLTIHEGSSDRNKIEDVDWMDTPIVPECFSSQLKTCSLIGYKGMNCDFQFAKYIL 313



 Score = 39.7 bits (91), Expect(2) = 3e-13
 Identities = 19/49 (38%), Positives = 33/49 (67%)
 Frame = -1

Query: 173 MQNSKVLHSLTIKSTWDVDPDIETEDKLYMLMKLSLCQRGSATCKLLFN 27
           ++N+KVL ++TI ++      ++   K  +L+KL+LC RGS TCK+ F+
Sbjct: 313 LKNAKVLQTMTINAS-----PVDINIKHQILIKLTLCPRGSTTCKISFD 356


>ref|XP_003589995.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355479043|gb|AES60246.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 450

 Score = 53.1 bits (126), Expect(2) = 6e-13
 Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
 Frame = -2

Query: 385 PKLQNLTI--LDLSDTVSGE-WEEPQTVAECLSSHLRTCCLVNYKGWNSELKFAKYIM 221
           PKLQ L I  +D+      + WE+P+ V  CL SHL TC L NY   N EL FA+YIM
Sbjct: 349 PKLQTLIIEEVDIVHNFGDKGWEDPKVVPRCLLSHLTTCSLRNYSRINCELPFARYIM 406



 Score = 45.4 bits (106), Expect(2) = 6e-13
 Identities = 24/48 (50%), Positives = 32/48 (66%)
 Frame = -1

Query: 173 MQNSKVLHSLTIKSTWDVDPDIETEDKLYMLMKLSLCQRGSATCKLLF 30
           MQNS++L ++TI+S   +D    T  KL M M+L LC R S TC+LLF
Sbjct: 406 MQNSRILRTMTIQSAEFLD----TNTKLQMFMELYLCPRNSITCQLLF 449


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