BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023918
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation spec...   272   2e-71
ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec...   270   1e-70
emb|CBI24510.3| unnamed protein product [Vitis vinifera]              226   2e-57
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec...   226   2e-57
ref|XP_002510905.1| cleavage and polyadenylation specificity fac...   206   1e-51

>ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max]
          Length = 1449

 Score =  272 bits (695), Expect = 2e-71
 Identities = 134/154 (87%), Positives = 140/154 (90%)
 Frame = -3

Query: 464  PYVLLRMSDGSIRLLIGDPSTCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTD 285
            P+VLLRMSDGSIRLLIGDPSTCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTD
Sbjct: 692  PFVLLRMSDGSIRLLIGDPSTCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTD 751

Query: 284  AWLSTGVGEAIDGTDGAAQDHGDIYCVVCYENGNLEIFDVPNFGCVFSVENFMSGKSHLV 105
            AWLSTGVGEAIDGTDGAAQDHGDIYCVVC++NGNLEIFD+PNF CVFSVENFMSGKSHLV
Sbjct: 752  AWLSTGVGEAIDGTDGAAQDHGDIYCVVCFDNGNLEIFDIPNFNCVFSVENFMSGKSHLV 811

Query: 104  DALMKEVPXXXXXXXXXXXGVVNQGRKENVLNMK 3
            DALMKEV            GVVNQGRK+N+ NMK
Sbjct: 812  DALMKEV--LKDSKQGDRDGVVNQGRKDNIPNMK 843


>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max]
          Length = 1447

 Score =  270 bits (689), Expect = 1e-70
 Identities = 133/154 (86%), Positives = 139/154 (90%)
 Frame = -3

Query: 464  PYVLLRMSDGSIRLLIGDPSTCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTD 285
            P+VLLRMSDGSIRLLIGDPSTCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTD
Sbjct: 690  PFVLLRMSDGSIRLLIGDPSTCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTD 749

Query: 284  AWLSTGVGEAIDGTDGAAQDHGDIYCVVCYENGNLEIFDVPNFGCVFSVENFMSGKSHLV 105
            AWLSTGVGE IDGTDGAAQDHGDIYCVVC++NGNLEIFDVPNF CVFSVENFMSGKSHLV
Sbjct: 750  AWLSTGVGETIDGTDGAAQDHGDIYCVVCFDNGNLEIFDVPNFNCVFSVENFMSGKSHLV 809

Query: 104  DALMKEVPXXXXXXXXXXXGVVNQGRKENVLNMK 3
            DALMKEV            GV+NQGRKEN+ +MK
Sbjct: 810  DALMKEV--LKDSKQGDRDGVINQGRKENIPDMK 841


>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  226 bits (576), Expect = 2e-57
 Identities = 109/155 (70%), Positives = 124/155 (80%), Gaps = 1/155 (0%)
 Frame = -3

Query: 464  PYVLLRMSDGSIRLLIGDPSTCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTD 285
            PYVLLRMSDG+I+LL+GDPSTCT+S+  PA FESSK S+S+CTLYHDKGPEPWLRKTSTD
Sbjct: 686  PYVLLRMSDGNIQLLVGDPSTCTVSINIPAVFESSKKSISACTLYHDKGPEPWLRKTSTD 745

Query: 284  AWLSTGVGEAIDGTDGAAQDHGDIYCVVCYENGNLEIFDVPNFGCVFSVENFMSGKSHLV 105
            AWLSTG+GEAIDG DGAAQD GDIYCVV YE+G+LEIFDVPNF CVFSV+ FMSG +HLV
Sbjct: 746  AWLSTGIGEAIDGADGAAQDQGDIYCVVSYESGDLEIFDVPNFNCVFSVDKFMSGNAHLV 805

Query: 104  DALMKE-VPXXXXXXXXXXXGVVNQGRKENVLNMK 3
            D L+ E                 +QGRKEN  N+K
Sbjct: 806  DTLILEPSEDTQKVMSKNSEEEADQGRKENAHNIK 840


>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Vitis vinifera]
          Length = 1442

 Score =  226 bits (576), Expect = 2e-57
 Identities = 109/155 (70%), Positives = 124/155 (80%), Gaps = 1/155 (0%)
 Frame = -3

Query: 464  PYVLLRMSDGSIRLLIGDPSTCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTD 285
            PYVLLRMSDG+I+LL+GDPSTCT+S+  PA FESSK S+S+CTLYHDKGPEPWLRKTSTD
Sbjct: 680  PYVLLRMSDGNIQLLVGDPSTCTVSINIPAVFESSKKSISACTLYHDKGPEPWLRKTSTD 739

Query: 284  AWLSTGVGEAIDGTDGAAQDHGDIYCVVCYENGNLEIFDVPNFGCVFSVENFMSGKSHLV 105
            AWLSTG+GEAIDG DGAAQD GDIYCVV YE+G+LEIFDVPNF CVFSV+ FMSG +HLV
Sbjct: 740  AWLSTGIGEAIDGADGAAQDQGDIYCVVSYESGDLEIFDVPNFNCVFSVDKFMSGNAHLV 799

Query: 104  DALMKE-VPXXXXXXXXXXXGVVNQGRKENVLNMK 3
            D L+ E                 +QGRKEN  N+K
Sbjct: 800  DTLILEPSEDTQKVMSKNSEEEADQGRKENAHNIK 834


>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
            [Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
            and polyadenylation specificity factor cpsf, putative
            [Ricinus communis]
          Length = 1461

 Score =  206 bits (525), Expect = 1e-51
 Identities = 101/158 (63%), Positives = 119/158 (75%), Gaps = 4/158 (2%)
 Frame = -3

Query: 464  PYVLLRMSDGSIRLLIGDPSTCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTD 285
            PYVL++M+DGSIRLLIGD STC +S+ +P++FE+S+ SVS+CTLYHDKGPEPWLRK STD
Sbjct: 696  PYVLIKMTDGSIRLLIGDSSTCMVSINTPSAFENSERSVSACTLYHDKGPEPWLRKASTD 755

Query: 284  AWLSTGVGEAIDG---TDGAAQDHGDIYCVVCYENGNLEIFDVPNFGCVFSVENFMSGKS 114
            AWLSTGV EAIDG    DG   D GDIYC+VCYE+G LEIFDVPNF  VFSV+ F+SGK+
Sbjct: 756  AWLSTGVSEAIDGAESADGGPHDQGDIYCIVCYESGALEIFDVPNFNRVFSVDKFVSGKT 815

Query: 113  HLVDALMKEVP-XXXXXXXXXXXGVVNQGRKENVLNMK 3
            HL DA ++E P             V   GRKEN  NMK
Sbjct: 816  HLADAYVREPPKDSQEKTNRISEEVAGLGRKENAHNMK 853