BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023917
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation spec...   182   3e-44
ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec...   175   3e-42
ref|NP_199979.2| cleavage and polyadenylation specificity factor...   165   3e-39
dbj|BAB11613.1| cleavage and polyadenylation specificity factor ...   165   3e-39
gb|AAN41460.1| putative cleavage and polyadenylation specificity...   165   3e-39

>ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Glycine max]
          Length = 1449

 Score =  182 bits (461), Expect = 3e-44
 Identities = 93/99 (93%), Positives = 96/99 (96%)
 Frame = +2

Query: 2   SKLADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQ 181
           SK+ADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQ
Sbjct: 589 SKMADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQ 648

Query: 182 VYERGARILDGSFMTQDISFGASNSESNHGSESALALSV 298
           VYERGARILDGSFMTQD+SFGASNSES   SESA+ALSV
Sbjct: 649 VYERGARILDGSFMTQDVSFGASNSESGSASESAIALSV 687


>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Glycine max]
          Length = 1447

 Score =  175 bits (444), Expect = 3e-42
 Identities = 90/99 (90%), Positives = 94/99 (94%)
 Frame = +2

Query: 2   SKLADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQ 181
           SK+ADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGR RVIQ
Sbjct: 587 SKMADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRCRVIQ 646

Query: 182 VYERGARILDGSFMTQDISFGASNSESNHGSESALALSV 298
           VYERGARILDGSFMTQD+SFGASN ES   S+SA+ALSV
Sbjct: 647 VYERGARILDGSFMTQDVSFGASNLESGSASDSAIALSV 685


>ref|NP_199979.2| cleavage and polyadenylation specificity factor subunit 1
           [Arabidopsis thaliana]
           gi|290457637|sp|Q9FGR0.2|CPSF1_ARATH RecName:
           Full=Cleavage and polyadenylation specificity factor
           subunit 1; AltName: Full=Cleavage and polyadenylation
           specificity factor 160 kDa subunit; Short=AtCPSF160;
           Short=CPSF 160 kDa subunit gi|332008729|gb|AED96112.1|
           cleavage and polyadenylation specificity factor subunit
           1 [Arabidopsis thaliana]
          Length = 1442

 Score =  165 bits (418), Expect = 3e-39
 Identities = 83/99 (83%), Positives = 92/99 (92%)
 Frame = +2

Query: 2   SKLADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQ 181
           SK+A D+DEYHAYLIISLEARTMVLETADLL+EVTESVDYYVQG+T+AAGNLFGRRRVIQ
Sbjct: 594 SKMAADEDEYHAYLIISLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVIQ 653

Query: 182 VYERGARILDGSFMTQDISFGASNSESNHGSESALALSV 298
           V+E GARILDGSFM Q++SFGASNSESN GSES+   SV
Sbjct: 654 VFEHGARILDGSFMNQELSFGASNSESNSGSESSTVSSV 692


>dbj|BAB11613.1| cleavage and polyadenylation specificity factor subunit
           [Arabidopsis thaliana]
          Length = 1448

 Score =  165 bits (418), Expect = 3e-39
 Identities = 83/99 (83%), Positives = 92/99 (92%)
 Frame = +2

Query: 2   SKLADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQ 181
           SK+A D+DEYHAYLIISLEARTMVLETADLL+EVTESVDYYVQG+T+AAGNLFGRRRVIQ
Sbjct: 600 SKMAADEDEYHAYLIISLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVIQ 659

Query: 182 VYERGARILDGSFMTQDISFGASNSESNHGSESALALSV 298
           V+E GARILDGSFM Q++SFGASNSESN GSES+   SV
Sbjct: 660 VFEHGARILDGSFMNQELSFGASNSESNSGSESSTVSSV 698


>gb|AAN41460.1| putative cleavage and polyadenylation specificity factor 160 kDa
           subunit [Arabidopsis thaliana]
          Length = 1442

 Score =  165 bits (418), Expect = 3e-39
 Identities = 83/99 (83%), Positives = 92/99 (92%)
 Frame = +2

Query: 2   SKLADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQ 181
           SK+A D+DEYHAYLIISLEARTMVLETADLL+EVTESVDYYVQG+T+AAGNLFGRRRVIQ
Sbjct: 594 SKMAADEDEYHAYLIISLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVIQ 653

Query: 182 VYERGARILDGSFMTQDISFGASNSESNHGSESALALSV 298
           V+E GARILDGSFM Q++SFGASNSESN GSES+   SV
Sbjct: 654 VFEHGARILDGSFMNQELSFGASNSESNSGSESSTVSSV 692