BLASTX nr result

ID: Glycyrrhiza24_contig00023889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023889
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555463.1| PREDICTED: conserved oligomeric Golgi comple...   163   1e-38
ref|XP_003535496.1| PREDICTED: conserved oligomeric Golgi comple...   162   3e-38
ref|XP_002514767.1| conserved hypothetical protein [Ricinus comm...   108   3e-22
ref|XP_002311274.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002316166.1| predicted protein [Populus trichocarpa] gi|2...   104   8e-21

>ref|XP_003555463.1| PREDICTED: conserved oligomeric Golgi complex subunit 1-like
           [Glycine max]
          Length = 1059

 Score =  163 bits (413), Expect = 1e-38
 Identities = 80/93 (86%), Positives = 86/93 (92%)
 Frame = -1

Query: 279 IRELVLEDDSDLWDEIFEDAFLGRMKAVIDLRFRELTGTVDVVNSISALVDSLTKQNEVQ 100
           IRELVLEDDSDLWDEIFEDAF+GRMKA+IDLRFRELTG VDV+NSISA+ D  TK  +VQ
Sbjct: 405 IRELVLEDDSDLWDEIFEDAFVGRMKAIIDLRFRELTGAVDVLNSISAIGDFCTKLEDVQ 464

Query: 99  GYFSRPSTAGGVWFLESNARKTGVASGFKVQPE 1
           GY +RPSTAGGVWFLESNARKTGVASGFKVQPE
Sbjct: 465 GYLNRPSTAGGVWFLESNARKTGVASGFKVQPE 497


>ref|XP_003535496.1| PREDICTED: conserved oligomeric Golgi complex subunit 1-like
           [Glycine max]
          Length = 1059

 Score =  162 bits (410), Expect = 3e-38
 Identities = 79/93 (84%), Positives = 87/93 (93%)
 Frame = -1

Query: 279 IRELVLEDDSDLWDEIFEDAFLGRMKAVIDLRFRELTGTVDVVNSISALVDSLTKQNEVQ 100
           IRELVLED+SDLWDEIFEDAF+GRMKA+IDLRFRELTG VDVVNSISA+ D  TK ++VQ
Sbjct: 405 IRELVLEDESDLWDEIFEDAFVGRMKAIIDLRFRELTGAVDVVNSISAIGDLCTKLDDVQ 464

Query: 99  GYFSRPSTAGGVWFLESNARKTGVASGFKVQPE 1
           GY +RPSTAGGVWFLESNA+KTGVASGFKVQPE
Sbjct: 465 GYLNRPSTAGGVWFLESNAKKTGVASGFKVQPE 497


>ref|XP_002514767.1| conserved hypothetical protein [Ricinus communis]
           gi|223545818|gb|EEF47321.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1065

 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/93 (55%), Positives = 67/93 (72%)
 Frame = -1

Query: 279 IRELVLEDDSDLWDEIFEDAFLGRMKAVIDLRFRELTGTVDVVNSISALVDSLTKQNEVQ 100
           IRELVLEDDSDLWDEIFEDAFL RMK +I   F++L   + + +SISA+  +  +  + Q
Sbjct: 405 IRELVLEDDSDLWDEIFEDAFLQRMKTIISSAFQDLATGIHLEDSISAIGGTTGQHIDFQ 464

Query: 99  GYFSRPSTAGGVWFLESNARKTGVASGFKVQPE 1
            Y +RPST GGVWF+E NA K+ + SG+K  PE
Sbjct: 465 AYLNRPSTGGGVWFIEPNANKSTLVSGYKASPE 497


>ref|XP_002311274.1| predicted protein [Populus trichocarpa] gi|222851094|gb|EEE88641.1|
           predicted protein [Populus trichocarpa]
          Length = 1071

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/93 (54%), Positives = 67/93 (72%)
 Frame = -1

Query: 279 IRELVLEDDSDLWDEIFEDAFLGRMKAVIDLRFRELTGTVDVVNSISALVDSLTKQNEVQ 100
           IRELVLEDDSDLWDEIFE AF+ RMK +I  RF +L   +++  SI A+ ++  +  + Q
Sbjct: 410 IRELVLEDDSDLWDEIFEGAFVQRMKTIITSRFEDLVRGINLGESICAVRETPGEPIDFQ 469

Query: 99  GYFSRPSTAGGVWFLESNARKTGVASGFKVQPE 1
            Y +RP T GGVWF+E NA+K+G+ SG KV PE
Sbjct: 470 AYLNRPCTGGGVWFIEPNAKKSGLGSGHKVSPE 502


>ref|XP_002316166.1| predicted protein [Populus trichocarpa] gi|222865206|gb|EEF02337.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score =  104 bits (259), Expect = 8e-21
 Identities = 50/93 (53%), Positives = 65/93 (69%)
 Frame = -1

Query: 279 IRELVLEDDSDLWDEIFEDAFLGRMKAVIDLRFRELTGTVDVVNSISALVDSLTKQNEVQ 100
           IRELVLEDDSDLWDEIFE AF+ RMK +I  RF +L   +++  SI A  ++  +Q + Q
Sbjct: 410 IRELVLEDDSDLWDEIFEGAFVQRMKTIIISRFEDLVRAINLGESICATGETPGEQIDFQ 469

Query: 99  GYFSRPSTAGGVWFLESNARKTGVASGFKVQPE 1
            Y +RPST GGVWF+E N +K+G+  G K  PE
Sbjct: 470 AYLNRPSTGGGVWFIEPNTKKSGLGLGHKASPE 502


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