BLASTX nr result

ID: Glycyrrhiza24_contig00023886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023886
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529876.1| PREDICTED: uncharacterized protein LOC100786...   231   5e-59
ref|XP_003548403.1| PREDICTED: uncharacterized protein LOC100788...   228   5e-58
ref|XP_002267504.2| PREDICTED: uncharacterized protein LOC100257...   222   2e-56
ref|XP_002515069.1| RNA-binding region-containing protein, putat...   220   8e-56
gb|ABK93394.1| unknown [Populus trichocarpa]                          207   9e-52

>ref|XP_003529876.1| PREDICTED: uncharacterized protein LOC100786208 [Glycine max]
          Length = 296

 Score =  231 bits (589), Expect = 5e-59
 Identities = 113/136 (83%), Positives = 120/136 (88%), Gaps = 1/136 (0%)
 Frame = +3

Query: 3   QNNKMMMMSPNVAKQVGDTTHTKIFVGGLAWETKRDTMRRYFEQFGEILEAVVITDKNSG 182
           Q  +  M+  N   Q  DTT TKIFVGGLAWET+RDTMRRYFEQFGEILEAVVITDKN+G
Sbjct: 3   QQRQTQMVGGNNPDQYNDTTFTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTG 62

Query: 183 RSKGYGFVTFKDPEAAMRACQNPSPVIDGRRANCNLASLGANKNRPPTLQHGAGRFRPPP 362
           RSKGYGFVTFKDPE+AMRACQNPSPVIDGRRANCNLASLGA+KNRPPT QHGAGRFRPPP
Sbjct: 63  RSKGYGFVTFKDPESAMRACQNPSPVIDGRRANCNLASLGASKNRPPTFQHGAGRFRPPP 122

Query: 363 GVVPS-HAYHGSSSTF 407
           G+V S  AYHGSSSTF
Sbjct: 123 GLVASPPAYHGSSSTF 138


>ref|XP_003548403.1| PREDICTED: uncharacterized protein LOC100788899 [Glycine max]
          Length = 291

 Score =  228 bits (580), Expect = 5e-58
 Identities = 111/135 (82%), Positives = 119/135 (88%), Gaps = 1/135 (0%)
 Frame = +3

Query: 3   QNNKMMMMSPNVAKQVGDTTHTKIFVGGLAWETKRDTMRRYFEQFGEILEAVVITDKNSG 182
           Q  +  M+  N   Q  DTT TKIFVGGLAWET+RDTMRRYFEQFGEILEAVVITDKN+G
Sbjct: 3   QQRQTQMVGGNNPDQYNDTTFTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTG 62

Query: 183 RSKGYGFVTFKDPEAAMRACQNPSPVIDGRRANCNLASLGANKNRPPTLQHGAGRFRPPP 362
           RSKGYGFVTFKDPE+AMRACQNPSPVIDGRRANCNLASLGA+KNRPPT QHGAGRFRPPP
Sbjct: 63  RSKGYGFVTFKDPESAMRACQNPSPVIDGRRANCNLASLGASKNRPPTFQHGAGRFRPPP 122

Query: 363 GVVPSH-AYHGSSST 404
           G+V S  AYHGSSS+
Sbjct: 123 GLVTSSPAYHGSSSS 137


>ref|XP_002267504.2| PREDICTED: uncharacterized protein LOC100257521 [Vitis vinifera]
           gi|296089004|emb|CBI38707.3| unnamed protein product
           [Vitis vinifera]
          Length = 267

 Score =  222 bits (566), Expect = 2e-56
 Identities = 107/129 (82%), Positives = 115/129 (89%)
 Frame = +3

Query: 21  MMSPNVAKQVGDTTHTKIFVGGLAWETKRDTMRRYFEQFGEILEAVVITDKNSGRSKGYG 200
           M+    A Q  DTT+TKIFVGGLAWET+RDTMRRYFEQFGEI EAVVITDKN+GRSKGYG
Sbjct: 1   MVGGTNAGQFNDTTYTKIFVGGLAWETQRDTMRRYFEQFGEIQEAVVITDKNTGRSKGYG 60

Query: 201 FVTFKDPEAAMRACQNPSPVIDGRRANCNLASLGANKNRPPTLQHGAGRFRPPPGVVPSH 380
           FVTFKDP+AAMRACQNPSPVIDGRRANCNLASLGA+K RPPT QHGAGRFRP PG+V   
Sbjct: 61  FVTFKDPDAAMRACQNPSPVIDGRRANCNLASLGAHKTRPPTPQHGAGRFRPAPGLVAPP 120

Query: 381 AYHGSSSTF 407
           AYHGSSST+
Sbjct: 121 AYHGSSSTY 129


>ref|XP_002515069.1| RNA-binding region-containing protein, putative [Ricinus communis]
           gi|223545549|gb|EEF47053.1| RNA-binding
           region-containing protein, putative [Ricinus communis]
          Length = 291

 Score =  220 bits (561), Expect = 8e-56
 Identities = 107/135 (79%), Positives = 115/135 (85%)
 Frame = +3

Query: 3   QNNKMMMMSPNVAKQVGDTTHTKIFVGGLAWETKRDTMRRYFEQFGEILEAVVITDKNSG 182
           Q  +  MM  +   Q  DTT TKIFVGGLAWET+RDTMRRYFEQFGEILEAVVITDKN+G
Sbjct: 3   QQRQFQMMGGSNLGQYNDTTFTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTG 62

Query: 183 RSKGYGFVTFKDPEAAMRACQNPSPVIDGRRANCNLASLGANKNRPPTLQHGAGRFRPPP 362
           RSKGYGFVTFKDPEAA+RACQNPSPVIDGRRANCNLASLGA+K R PT QHG GRFRP P
Sbjct: 63  RSKGYGFVTFKDPEAAIRACQNPSPVIDGRRANCNLASLGAHKTRSPTPQHGGGRFRPAP 122

Query: 363 GVVPSHAYHGSSSTF 407
           GVV   AYHGSSS++
Sbjct: 123 GVVAPPAYHGSSSSY 137


>gb|ABK93394.1| unknown [Populus trichocarpa]
          Length = 294

 Score =  207 bits (526), Expect = 9e-52
 Identities = 98/123 (79%), Positives = 108/123 (87%)
 Frame = +3

Query: 39  AKQVGDTTHTKIFVGGLAWETKRDTMRRYFEQFGEILEAVVITDKNSGRSKGYGFVTFKD 218
           ++Q  DTT+TKIFVGGLAWET+RD MRRYFEQFGEILEAVVITDKN+GRSKGYGFVTFKD
Sbjct: 16  SRQYNDTTYTKIFVGGLAWETQRDAMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKD 75

Query: 219 PEAAMRACQNPSPVIDGRRANCNLASLGANKNRPPTLQHGAGRFRPPPGVVPSHAYHGSS 398
           PEAA+RACQNPSPVIDGRRANCNLASLG  KNRPPT QHG GRFRP  G+V    + GSS
Sbjct: 76  PEAAVRACQNPSPVIDGRRANCNLASLGGQKNRPPTPQHGTGRFRPVHGLVAPPTFPGSS 135

Query: 399 STF 407
           + +
Sbjct: 136 APY 138


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