BLASTX nr result

ID: Glycyrrhiza24_contig00023877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023877
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532040.1| PREDICTED: tRNA uridine 5-carboxymethylamino...    92   4e-17
ref|XP_003525131.1| PREDICTED: tRNA uridine 5-carboxymethylamino...    92   4e-17
ref|XP_003630302.1| tRNA uridine 5-carboxymethylaminomethyl modi...    89   4e-16

>ref|XP_003532040.1| PREDICTED: tRNA uridine 5-carboxymethylaminomethyl modification
           enzyme MnmG-like [Glycine max]
          Length = 719

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/93 (52%), Positives = 61/93 (65%)
 Frame = -3

Query: 282 MATAPFTLHLCRFGQSLCKTLFPTSSPTLLNPRYVTFRRKFCXXXXXXXXXXXXXXSAVA 103
           MATAP   H+CR G+SLC+TLF TSSP L +  +VTFRR+                   +
Sbjct: 1   MATAPLNNHICRLGRSLCRTLFLTSSPALRSSPHVTFRRRI---------SFSSFPRRFS 51

Query: 102 AGSPSRDLDYGIGTVDEKYDVIVVGGGHAGCEA 4
           A S SR+++Y +G +DEKYDVIVVGGGHAGCEA
Sbjct: 52  ASSTSREVEYELG-LDEKYDVIVVGGGHAGCEA 83


>ref|XP_003525131.1| PREDICTED: tRNA uridine 5-carboxymethylaminomethyl modification
           enzyme MnmG-like [Glycine max]
          Length = 724

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 54/97 (55%), Positives = 62/97 (63%), Gaps = 4/97 (4%)
 Frame = -3

Query: 282 MATAPFTLHLCRFGQSLCKTLFPTSSPTLL-NPRYVTFRRKFCXXXXXXXXXXXXXXSAV 106
           MATAP TLHLC  G+SLCKTLF T SP  L +  +VTFR KF                  
Sbjct: 1   MATAPLTLHLCCLGRSLCKTLFLTPSPAALGSSPHVTFRGKF--------RRRISLSRRF 52

Query: 105 AAGSPSRDLDYGI---GTVDEKYDVIVVGGGHAGCEA 4
           +AGS SR+++Y +   G VDEKYDVIVVGGGHAGCEA
Sbjct: 53  SAGSTSREVEYELGFGGGVDEKYDVIVVGGGHAGCEA 89


>ref|XP_003630302.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG
           [Medicago truncatula] gi|355524324|gb|AET04778.1| tRNA
           uridine 5-carboxymethylaminomethyl modification enzyme
           mnmG [Medicago truncatula]
          Length = 727

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 51/93 (54%), Positives = 56/93 (60%)
 Frame = -3

Query: 282 MATAPFTLHLCRFGQSLCKTLFPTSSPTLLNPRYVTFRRKFCXXXXXXXXXXXXXXSAVA 103
           M+T PFTLH  RF ++L KTLFPTSS TL  P  + FR                  S V 
Sbjct: 1   MSTVPFTLHFSRFNRNLRKTLFPTSSITLFYPPSLNFRLTTRRKISFSASTFSRRFSTVT 60

Query: 102 AGSPSRDLDYGIGTVDEKYDVIVVGGGHAGCEA 4
           + S SRDLDY  GT  EKYDVIVVGGGHAGCEA
Sbjct: 61  SASSSRDLDYEFGT--EKYDVIVVGGGHAGCEA 91


Top