BLASTX nr result

ID: Glycyrrhiza24_contig00023873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023873
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_064042.2| cob gene product (mitochondrion) [Beta vulgaris...   197   6e-49
ref|YP_005090492.1| apocytochrome b (mitochondrion) [Lotus japon...   197   7e-49
ref|YP_003875502.1| apocytochrome b [Silene latifolia] gi|296040...   197   7e-49
ref|YP_005090467.1| apocytochrome b (mitochondrion) [Millettia p...   197   1e-48
gb|AAU25941.1| cytochrome b [Vitis vinifera]                          197   1e-48

>ref|NP_064042.2| cob gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435065|ref|YP_004222283.1| apocytochrome B [Beta
           vulgaris subsp. maritima]
           gi|346683265|ref|YP_004842197.1| apocytochrome b [Beta
           macrocarpa] gi|87248021|gb|ABD36065.1| apocytochrome b
           [Beta vulgaris subsp. vulgaris]
           gi|148491422|dbj|BAA99352.2| apocytochrome B [Beta
           vulgaris subsp. vulgaris] gi|317905718|emb|CBJ14105.1|
           apocytochrome B [Beta vulgaris subsp. maritima]
           gi|319439798|emb|CBJ17512.1| apocytochrome B [Beta
           vulgaris subsp. maritima] gi|320148713|emb|CBJ23351.1|
           apocytochrome B [Beta vulgaris subsp. maritima]
           gi|345500183|emb|CBX25002.1| apocytochrome B [Beta
           macrocarpa] gi|384939193|emb|CBL52040.1| apocytochrome B
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 393

 Score =  197 bits (502), Expect = 6e-49
 Identities = 96/108 (88%), Positives = 98/108 (90%)
 Frame = +3

Query: 3   VPEWYFLPIYAILRSIPDKSGGVAAIALVFICLLALPFFKSMYVRSSSFRPIYQGIFWXX 182
           VPEWYFLPIYAILRSIPDKSGGVAAIALVFICLLALPFFKSMYVRSSSFRPIYQG+FW  
Sbjct: 276 VPEWYFLPIYAILRSIPDKSGGVAAIALVFICLLALPFFKSMYVRSSSFRPIYQGLFWLL 335

Query: 183 XXXXXXXGWIGCQPVEAPFVTIGQISSFVFFLFFAITPILGRVGIRIP 326
                  GWIGCQPVEAPFVTIGQISSF+FFLFFAITPILGRVG RIP
Sbjct: 336 LADCLLLGWIGCQPVEAPFVTIGQISSFLFFLFFAITPILGRVGRRIP 383


>ref|YP_005090492.1| apocytochrome b (mitochondrion) [Lotus japonicus]
           gi|357197356|gb|AET62952.1| apocytochrome b
           (mitochondrion) [Lotus japonicus]
          Length = 394

 Score =  197 bits (501), Expect = 7e-49
 Identities = 97/108 (89%), Positives = 97/108 (89%)
 Frame = +3

Query: 3   VPEWYFLPIYAILRSIPDKSGGVAAIALVFICLLALPFFKSMYVRSSSFRPIYQGIFWXX 182
           VPEWYFLPIYAILRSIPDKSGGVAAIALVFICLLALPFFKSMYVRSSSFRPIYQGIFW  
Sbjct: 278 VPEWYFLPIYAILRSIPDKSGGVAAIALVFICLLALPFFKSMYVRSSSFRPIYQGIFWLL 337

Query: 183 XXXXXXXGWIGCQPVEAPFVTIGQISSFVFFLFFAITPILGRVGIRIP 326
                  GWIGCQPVEAPFVTIGQISS VFFLFFAITPILGRVGI IP
Sbjct: 338 LADCLLLGWIGCQPVEAPFVTIGQISSLVFFLFFAITPILGRVGIGIP 385


>ref|YP_003875502.1| apocytochrome b [Silene latifolia] gi|296040669|gb|ADG85302.1|
           apocytochrome b [Silene latifolia]
           gi|301338023|gb|ADK73315.1| apocytochrome b [Silene
           latifolia]
          Length = 393

 Score =  197 bits (501), Expect = 7e-49
 Identities = 97/108 (89%), Positives = 97/108 (89%)
 Frame = +3

Query: 3   VPEWYFLPIYAILRSIPDKSGGVAAIALVFICLLALPFFKSMYVRSSSFRPIYQGIFWXX 182
           VPEWYFLPIYAILRSIPDKSGGVAAIALVFICLLALPFFKSMYVRSSSFRPIYQGIFW  
Sbjct: 276 VPEWYFLPIYAILRSIPDKSGGVAAIALVFICLLALPFFKSMYVRSSSFRPIYQGIFWLL 335

Query: 183 XXXXXXXGWIGCQPVEAPFVTIGQISSFVFFLFFAITPILGRVGIRIP 326
                  GWIGCQPVEAPFVTIGQISS VFFLFFAITPILGRVG RIP
Sbjct: 336 LADCLLLGWIGCQPVEAPFVTIGQISSLVFFLFFAITPILGRVGRRIP 383


>ref|YP_005090467.1| apocytochrome b (mitochondrion) [Millettia pinnata]
           gi|357197330|gb|AET62927.1| apocytochrome b
           (mitochondrion) [Millettia pinnata]
          Length = 392

 Score =  197 bits (500), Expect = 1e-48
 Identities = 97/108 (89%), Positives = 97/108 (89%)
 Frame = +3

Query: 3   VPEWYFLPIYAILRSIPDKSGGVAAIALVFICLLALPFFKSMYVRSSSFRPIYQGIFWXX 182
           VPEWYFLPIYAILRSIPDKSGGVAAIALVFICLLALPFFKSMYVRSSSFRPIYQGIFW  
Sbjct: 276 VPEWYFLPIYAILRSIPDKSGGVAAIALVFICLLALPFFKSMYVRSSSFRPIYQGIFWLL 335

Query: 183 XXXXXXXGWIGCQPVEAPFVTIGQISSFVFFLFFAITPILGRVGIRIP 326
                  GWIGCQPVEAPFVTIGQISSFVFFLFFAITPILGRVG  IP
Sbjct: 336 LADCLLLGWIGCQPVEAPFVTIGQISSFVFFLFFAITPILGRVGRGIP 383


>gb|AAU25941.1| cytochrome b [Vitis vinifera]
          Length = 393

 Score =  197 bits (500), Expect = 1e-48
 Identities = 97/108 (89%), Positives = 97/108 (89%)
 Frame = +3

Query: 3   VPEWYFLPIYAILRSIPDKSGGVAAIALVFICLLALPFFKSMYVRSSSFRPIYQGIFWXX 182
           VPEWYFLPIYAILRSIPDKSGGVAAIALVFICLLALPFFKSMYVRSSSFRPIYQGIFW  
Sbjct: 276 VPEWYFLPIYAILRSIPDKSGGVAAIALVFICLLALPFFKSMYVRSSSFRPIYQGIFWLL 335

Query: 183 XXXXXXXGWIGCQPVEAPFVTIGQISSFVFFLFFAITPILGRVGIRIP 326
                  GWIGCQPVEAPFVTIGQISSFVFFLFFAITPILGRVG  IP
Sbjct: 336 LADCLLLGWIGCQPVEAPFVTIGQISSFVFFLFFAITPILGRVGRGIP 383


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