BLASTX nr result

ID: Glycyrrhiza24_contig00023872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023872
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536482.1| PREDICTED: traB domain-containing protein-li...   334   2e-89
ref|XP_003592316.1| TraB domain-containing protein [Medicago tru...   322   1e-85
ref|XP_002318253.1| predicted protein [Populus trichocarpa] gi|2...   298   1e-78
emb|CBI31844.3| unnamed protein product [Vitis vinifera]              294   2e-77
ref|XP_002274961.1| PREDICTED: traB domain-containing protein-li...   294   2e-77

>ref|XP_003536482.1| PREDICTED: traB domain-containing protein-like [Glycine max]
          Length = 371

 Score =  334 bits (857), Expect = 2e-89
 Identities = 176/251 (70%), Positives = 189/251 (75%), Gaps = 2/251 (0%)
 Frame = +1

Query: 1   IMYAAADDELGKQQLRSNMFSLSGTGFFGAISRSINLGGQTXXXXXXXXXXFSSKISSDI 180
           IMYA A+DELGKQ LRSNMFSLSGTGFFGA+ RSINLGGQT          FSSKISSDI
Sbjct: 122 IMYATANDELGKQ-LRSNMFSLSGTGFFGAVGRSINLGGQTALALRLLLATFSSKISSDI 180

Query: 181 NRPFGDEFRAARKVSEEVGAQIVLGDRPIEITLQRAWEALKWTEKLXXXXXXXXXXXXXX 360
           NRPFGDEFRAARK SEE+GAQIVLGDRPIEITLQRAW+A+KWT+KL              
Sbjct: 181 NRPFGDEFRAARKASEEIGAQIVLGDRPIEITLQRAWKAMKWTQKLSLVLSIIRGIASSS 240

Query: 361 XXXTNKL--EGASSDDGTFQLYEQXXXXXXXXXXXXIHERDTYLAWSLKRSKAVNNCKRV 534
               NKL  + ASSDDGTFQLYEQ            IHERDTYLAWSLKRSKAVNN K V
Sbjct: 241 NSSINKLKLQEASSDDGTFQLYEQLSFSYPSLLPPLIHERDTYLAWSLKRSKAVNNSKNV 300

Query: 535 VGVIGKGHMNGVIYALLSDTGSLRFRDLVGKXXXXXXXXXXWIDGIVKSLVRDTVIGIIL 714
           VGVIGKGHMNGVIYALLSDTG+LRFRDLVGK          WID ++KSLVRDT+IGI+L
Sbjct: 301 VGVIGKGHMNGVIYALLSDTGNLRFRDLVGKNSYDGGGSNGWIDDLIKSLVRDTIIGILL 360

Query: 715 WALYELVKGGT 747
           WALYE + GGT
Sbjct: 361 WALYEFINGGT 371


>ref|XP_003592316.1| TraB domain-containing protein [Medicago truncatula]
           gi|355481364|gb|AES62567.1| TraB domain-containing
           protein [Medicago truncatula]
          Length = 380

 Score =  322 bits (824), Expect = 1e-85
 Identities = 174/249 (69%), Positives = 187/249 (75%)
 Frame = +1

Query: 1   IMYAAADDELGKQQLRSNMFSLSGTGFFGAISRSINLGGQTXXXXXXXXXXFSSKISSDI 180
           IMYA  DD+L KQ LRS MFSLSGTGFFGAI RSINLGGQT          FSSKISS+I
Sbjct: 132 IMYAD-DDQLDKQ-LRSTMFSLSGTGFFGAIGRSINLGGQTALALRLLLAAFSSKISSNI 189

Query: 181 NRPFGDEFRAARKVSEEVGAQIVLGDRPIEITLQRAWEALKWTEKLXXXXXXXXXXXXXX 360
           +RPFGDEFRAARKVSEEVGAQ+VLGDRPIEITLQRAW+AL WT+KL              
Sbjct: 190 DRPFGDEFRAARKVSEEVGAQLVLGDRPIEITLQRAWKALNWTQKLSLLTIVVRGITSSS 249

Query: 361 XXXTNKLEGASSDDGTFQLYEQXXXXXXXXXXXXIHERDTYLAWSLKRSKAVNNCKRVVG 540
              T+KLE ASS+DGT QLYEQ            IHERDTYLAWSLKRSKAVNNCKRVVG
Sbjct: 250 DISTDKLEKASSNDGTLQLYEQLSFSYPSLLPPLIHERDTYLAWSLKRSKAVNNCKRVVG 309

Query: 541 VIGKGHMNGVIYALLSDTGSLRFRDLVGKXXXXXXXXXXWIDGIVKSLVRDTVIGIILWA 720
           VIGKGHMNGVIYALL+DTG+LRFRDL GK          WID +VKSLVRDTVIGI+LWA
Sbjct: 310 VIGKGHMNGVIYALLADTGNLRFRDLTGK-NSNDGGSNGWIDDLVKSLVRDTVIGIVLWA 368

Query: 721 LYELVKGGT 747
           LYE + GGT
Sbjct: 369 LYEYINGGT 377


>ref|XP_002318253.1| predicted protein [Populus trichocarpa] gi|222858926|gb|EEE96473.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  298 bits (763), Expect = 1e-78
 Identities = 156/246 (63%), Positives = 177/246 (71%)
 Frame = +1

Query: 4   MYAAADDELGKQQLRSNMFSLSGTGFFGAISRSINLGGQTXXXXXXXXXXFSSKISSDIN 183
           MY + + E+G QQLRS+MFSLSGTGFFGA+ RSINLGGQT          FSSKISSD+N
Sbjct: 1   MYISDEGEVG-QQLRSSMFSLSGTGFFGAVGRSINLGGQTALALRLLLALFSSKISSDVN 59

Query: 184 RPFGDEFRAARKVSEEVGAQIVLGDRPIEITLQRAWEALKWTEKLXXXXXXXXXXXXXXX 363
           RPFGDEFRAARKV+EE+GAQIVLGDRPIEITL+RAW +LKW EKL               
Sbjct: 60  RPFGDEFRAARKVAEEIGAQIVLGDRPIEITLERAWNSLKWREKLSLVIAVVRGITSSSD 119

Query: 364 XXTNKLEGASSDDGTFQLYEQXXXXXXXXXXXXIHERDTYLAWSLKRSKAVNNCKRVVGV 543
              N  + +S+DD TFQLYEQ            IHERDTYLAWSLKRSKAVNN KRVVGV
Sbjct: 120 ISKNNFKASSTDDRTFQLYEQLSFSYPSLLQPLIHERDTYLAWSLKRSKAVNNGKRVVGV 179

Query: 544 IGKGHMNGVIYALLSDTGSLRFRDLVGKXXXXXXXXXXWIDGIVKSLVRDTVIGIILWAL 723
           IGKGHMNGVIYAL+SD G+LRFRDL G+          ++ G+VKSLV DT IGI+LW L
Sbjct: 180 IGKGHMNGVIYALISDQGNLRFRDLAGRRSSGDDGSNGFVAGLVKSLVIDTAIGILLWQL 239

Query: 724 YELVKG 741
           YE +KG
Sbjct: 240 YEQLKG 245


>emb|CBI31844.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score =  294 bits (753), Expect = 2e-77
 Identities = 158/246 (64%), Positives = 179/246 (72%)
 Frame = +1

Query: 1   IMYAAADDELGKQQLRSNMFSLSGTGFFGAISRSINLGGQTXXXXXXXXXXFSSKISSDI 180
           IMY +   EL  QQLRS+MFSLSGTGFFGAI RSINLGGQT          FSSKISSD+
Sbjct: 135 IMYTSNHGELN-QQLRSSMFSLSGTGFFGAIGRSINLGGQTALALRLLLAVFSSKISSDV 193

Query: 181 NRPFGDEFRAARKVSEEVGAQIVLGDRPIEITLQRAWEALKWTEKLXXXXXXXXXXXXXX 360
           NRPFGDEFRAARK SE+VGAQIVLGDRPIEITL+RAW +L+W EKL              
Sbjct: 194 NRPFGDEFRAARKASEKVGAQIVLGDRPIEITLERAWNSLEWNEKL-SLVISVIRGITSS 252

Query: 361 XXXTNKLEGASSDDGTFQLYEQXXXXXXXXXXXXIHERDTYLAWSLKRSKAVNNCKRVVG 540
              TN+++  S+DD TFQLY+Q            IHERDTYLAWSLKRSKAVN  KRVVG
Sbjct: 253 ELSTNEMKELSTDDSTFQLYDQLSVAYPSLLQPLIHERDTYLAWSLKRSKAVNGGKRVVG 312

Query: 541 VIGKGHMNGVIYALLSDTGSLRFRDLVGKXXXXXXXXXXWIDGIVKSLVRDTVIGIILWA 720
           VIGKGHMNGVIYAL+SD G+LRFRDLVGK          W+D ++K+LVRDTVIGI+LWA
Sbjct: 313 VIGKGHMNGVIYALVSDQGNLRFRDLVGK-RSSGDGANGWVDSLLKNLVRDTVIGILLWA 371

Query: 721 LYELVK 738
           L+E +K
Sbjct: 372 LFEQIK 377


>ref|XP_002274961.1| PREDICTED: traB domain-containing protein-like [Vitis vinifera]
          Length = 385

 Score =  294 bits (753), Expect = 2e-77
 Identities = 158/246 (64%), Positives = 179/246 (72%)
 Frame = +1

Query: 1   IMYAAADDELGKQQLRSNMFSLSGTGFFGAISRSINLGGQTXXXXXXXXXXFSSKISSDI 180
           IMY +   EL  QQLRS+MFSLSGTGFFGAI RSINLGGQT          FSSKISSD+
Sbjct: 140 IMYTSNHGELN-QQLRSSMFSLSGTGFFGAIGRSINLGGQTALALRLLLAVFSSKISSDV 198

Query: 181 NRPFGDEFRAARKVSEEVGAQIVLGDRPIEITLQRAWEALKWTEKLXXXXXXXXXXXXXX 360
           NRPFGDEFRAARK SE+VGAQIVLGDRPIEITL+RAW +L+W EKL              
Sbjct: 199 NRPFGDEFRAARKASEKVGAQIVLGDRPIEITLERAWNSLEWNEKL-SLVISVIRGITSS 257

Query: 361 XXXTNKLEGASSDDGTFQLYEQXXXXXXXXXXXXIHERDTYLAWSLKRSKAVNNCKRVVG 540
              TN+++  S+DD TFQLY+Q            IHERDTYLAWSLKRSKAVN  KRVVG
Sbjct: 258 ELSTNEMKELSTDDSTFQLYDQLSVAYPSLLQPLIHERDTYLAWSLKRSKAVNGGKRVVG 317

Query: 541 VIGKGHMNGVIYALLSDTGSLRFRDLVGKXXXXXXXXXXWIDGIVKSLVRDTVIGIILWA 720
           VIGKGHMNGVIYAL+SD G+LRFRDLVGK          W+D ++K+LVRDTVIGI+LWA
Sbjct: 318 VIGKGHMNGVIYALVSDQGNLRFRDLVGK-RSSGDGANGWVDSLLKNLVRDTVIGILLWA 376

Query: 721 LYELVK 738
           L+E +K
Sbjct: 377 LFEQIK 382


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