BLASTX nr result

ID: Glycyrrhiza24_contig00023866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023866
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533123.1| PREDICTED: nuclear export mediator factor Ne...   387   e-106
ref|XP_003547349.1| PREDICTED: nuclear export mediator factor NE...   385   e-105
ref|XP_003594657.1| Serologically defined colon cancer antigen-l...   363   2e-98
ref|XP_002273922.1| PREDICTED: nuclear export mediator factor Ne...   311   8e-83
emb|CBI22840.3| unnamed protein product [Vitis vinifera]              308   7e-82

>ref|XP_003533123.1| PREDICTED: nuclear export mediator factor Nemf-like [Glycine max]
          Length = 1131

 Score =  387 bits (994), Expect = e-106
 Identities = 191/212 (90%), Positives = 202/212 (95%)
 Frame = +1

Query: 1   NGSDLSNVVREKQGARKGGKSSATLKIVLGEALGYGPALSEHIILDAGLIPNAKVPKDKT 180
           NGS+ SNV +EKQG  KGGKSSATLKIVLGEALGYGPALSEHI+LDAGLIP+ KVPKD+T
Sbjct: 198 NGSNASNVAKEKQGTHKGGKSSATLKIVLGEALGYGPALSEHILLDAGLIPSTKVPKDRT 257

Query: 181 WDDATVQALVQAVARFEDWMQDIISGEIVPEGYILMQNKNLGKDSSASQPESVSQIYDEF 360
           WDDATVQALVQAV RFEDWMQD+ISGE+VPEGYILMQNKN+GKDSS SQP SVSQ+YDEF
Sbjct: 258 WDDATVQALVQAVVRFEDWMQDVISGELVPEGYILMQNKNMGKDSSISQPGSVSQMYDEF 317

Query: 361 CPILLNQFKSRDYTKFETFDAALDEFYSKIESQRSEQQQKAKENSAHQKLNKIRQDQENR 540
           CPILLNQFKSRDYTKFETFDAALDEFYSKIESQRSEQQQKAKENSA QKLN+IRQDQENR
Sbjct: 318 CPILLNQFKSRDYTKFETFDAALDEFYSKIESQRSEQQQKAKENSASQKLNRIRQDQENR 377

Query: 541 VHTLRKEADHCVRMAELIEYNLEDVDAAILAV 636
           VH LRKEADHCV+MAELIEYNLEDVDAAILAV
Sbjct: 378 VHALRKEADHCVKMAELIEYNLEDVDAAILAV 409


>ref|XP_003547349.1| PREDICTED: nuclear export mediator factor NEMF homolog [Glycine
           max]
          Length = 1119

 Score =  385 bits (990), Expect = e-105
 Identities = 192/212 (90%), Positives = 202/212 (95%)
 Frame = +1

Query: 1   NGSDLSNVVREKQGARKGGKSSATLKIVLGEALGYGPALSEHIILDAGLIPNAKVPKDKT 180
           NGS+ SNV +EKQ  RKGGKSSATLKIVLGEALGYGPALSEHIILDAGLIP+ KVPKD+T
Sbjct: 198 NGSNASNVAKEKQETRKGGKSSATLKIVLGEALGYGPALSEHIILDAGLIPSTKVPKDRT 257

Query: 181 WDDATVQALVQAVARFEDWMQDIISGEIVPEGYILMQNKNLGKDSSASQPESVSQIYDEF 360
           WDDATVQALVQAV +FEDWMQD+ISGEIVPEGYILMQNKNLGKDSS SQP SVSQ+YDEF
Sbjct: 258 WDDATVQALVQAVVKFEDWMQDVISGEIVPEGYILMQNKNLGKDSSISQPGSVSQMYDEF 317

Query: 361 CPILLNQFKSRDYTKFETFDAALDEFYSKIESQRSEQQQKAKENSAHQKLNKIRQDQENR 540
           CPILLNQFKSRDYTKFETFDAALDEFYSKIESQR+EQQQK+KENSA QKLNKIRQDQENR
Sbjct: 318 CPILLNQFKSRDYTKFETFDAALDEFYSKIESQRAEQQQKSKENSAAQKLNKIRQDQENR 377

Query: 541 VHTLRKEADHCVRMAELIEYNLEDVDAAILAV 636
           VH LRKEADHCV+MAELIEYNLEDVDAAILAV
Sbjct: 378 VHVLRKEADHCVKMAELIEYNLEDVDAAILAV 409


>ref|XP_003594657.1| Serologically defined colon cancer antigen-like protein [Medicago
           truncatula] gi|355483705|gb|AES64908.1| Serologically
           defined colon cancer antigen-like protein [Medicago
           truncatula]
          Length = 1146

 Score =  363 bits (931), Expect = 2e-98
 Identities = 185/222 (83%), Positives = 198/222 (89%), Gaps = 10/222 (4%)
 Frame = +1

Query: 1   NGSDLSNVVREKQGARKGGKSSATLKIVLGEALGYGPALSEHIILDAGLIPNAKVPKDKT 180
           NG+D+SNV +EKQG++K GKS ATLKI+LGEALGYGPALSEH+ILDAGLIPN KV KDK 
Sbjct: 198 NGTDVSNVEKEKQGSKKSGKSYATLKIILGEALGYGPALSEHMILDAGLIPNEKVSKDKV 257

Query: 181 WDDATVQALVQAVARFEDWMQDIISGEIVPEGYILMQNKNLGKDSSASQPESVSQIYDEF 360
           WDDATVQALVQAVA+FEDWMQDIISGEIVPEGYILMQNK LGKDSS SQPES+ QIYDEF
Sbjct: 258 WDDATVQALVQAVAKFEDWMQDIISGEIVPEGYILMQNKVLGKDSSVSQPESLKQIYDEF 317

Query: 361 CPILLNQFKSRDYTKFETFDAALDEFYSKIESQRSEQQQKAKENSAHQKLNKIRQDQ--- 531
           CPILLNQFKSRD+TKFETFD ALDEFYSKIESQRSEQQ  AKENSA QKLNKIR DQ   
Sbjct: 318 CPILLNQFKSRDHTKFETFDLALDEFYSKIESQRSEQQHTAKENSALQKLNKIRNDQVGT 377

Query: 532 -------ENRVHTLRKEADHCVRMAELIEYNLEDVDAAILAV 636
                  ENRVHTLRKEAD+C++MAELIEYNLEDVDAAILAV
Sbjct: 378 HVQTSTIENRVHTLRKEADNCIKMAELIEYNLEDVDAAILAV 419


>ref|XP_002273922.1| PREDICTED: nuclear export mediator factor Nemf-like [Vitis
           vinifera]
          Length = 1110

 Score =  311 bits (796), Expect = 8e-83
 Identities = 163/226 (72%), Positives = 181/226 (80%), Gaps = 15/226 (6%)
 Frame = +1

Query: 4   GSDLSNVVREKQGARKGGKSS--------------ATLKIVLGEALGYGPALSEHIILDA 141
           G+ +S+  REKQG  KG KSS              ATLK VLGEALGYGPALSEHIILDA
Sbjct: 199 GNKVSDAPREKQGNNKGVKSSEPSKNTNDGARAKQATLKTVLGEALGYGPALSEHIILDA 258

Query: 142 GLIPNAKVPKDKTWDDATVQALVQAVARFEDWMQDIISGEIVPEGYILMQNKNLGKDSSA 321
           GLIPN KV KD  +D  T+Q L Q+V +FE+W++D+ISG+ VPEGYILMQNK  GKD   
Sbjct: 259 GLIPNTKVTKDSKFDIDTIQRLAQSVTKFENWLEDVISGDQVPEGYILMQNKIFGKDCPP 318

Query: 322 SQPESVSQ-IYDEFCPILLNQFKSRDYTKFETFDAALDEFYSKIESQRSEQQQKAKENSA 498
           SQP+  SQ IYDEFCPILLNQFKSR++ KFETFDAALDEFYSKIESQRSEQQQKAKE SA
Sbjct: 319 SQPDRGSQVIYDEFCPILLNQFKSREFVKFETFDAALDEFYSKIESQRSEQQQKAKEGSA 378

Query: 499 HQKLNKIRQDQENRVHTLRKEADHCVRMAELIEYNLEDVDAAILAV 636
            QKL KIR DQENRVHTL+KE DHC++MAELIEYNLEDVDAAILAV
Sbjct: 379 MQKLTKIRVDQENRVHTLKKEVDHCIKMAELIEYNLEDVDAAILAV 424


>emb|CBI22840.3| unnamed protein product [Vitis vinifera]
          Length = 993

 Score =  308 bits (788), Expect = 7e-82
 Identities = 159/215 (73%), Positives = 174/215 (80%), Gaps = 14/215 (6%)
 Frame = +1

Query: 34  KQGARKGGKSS--------------ATLKIVLGEALGYGPALSEHIILDAGLIPNAKVPK 171
           KQG  KG KSS              ATLK VLGEALGYGPALSEHIILDAGLIPN KV K
Sbjct: 193 KQGNNKGVKSSEPSKNTNDGARAKQATLKTVLGEALGYGPALSEHIILDAGLIPNTKVTK 252

Query: 172 DKTWDDATVQALVQAVARFEDWMQDIISGEIVPEGYILMQNKNLGKDSSASQPESVSQIY 351
           D  +D  T+Q L Q+V +FE+W++D+ISG+ VPEGYILMQNK  GKD   SQP+  SQIY
Sbjct: 253 DSKFDIDTIQRLAQSVTKFENWLEDVISGDQVPEGYILMQNKIFGKDCPPSQPDRGSQIY 312

Query: 352 DEFCPILLNQFKSRDYTKFETFDAALDEFYSKIESQRSEQQQKAKENSAHQKLNKIRQDQ 531
           DEFCPILLNQFKSR++ KFETFDAALDEFYSKIESQRSEQQQKAKE SA QKL KIR DQ
Sbjct: 313 DEFCPILLNQFKSREFVKFETFDAALDEFYSKIESQRSEQQQKAKEGSAMQKLTKIRVDQ 372

Query: 532 ENRVHTLRKEADHCVRMAELIEYNLEDVDAAILAV 636
           ENRVHTL+KE DHC++MAELIEYNLEDVDAAILAV
Sbjct: 373 ENRVHTLKKEVDHCIKMAELIEYNLEDVDAAILAV 407


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