BLASTX nr result

ID: Glycyrrhiza24_contig00023858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023858
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522626.1| PREDICTED: uncharacterized protein LOC100812...   180   9e-44
gb|AFK44933.1| unknown [Medicago truncatula]                          143   2e-32
ref|XP_003603435.1| RNA binding protein [Medicago truncatula] gi...   143   2e-32
ref|XP_003603436.1| ABC transporter G family member [Medicago tr...    96   2e-18
ref|XP_002282448.1| PREDICTED: uncharacterized protein LOC100264...    73   3e-11

>ref|XP_003522626.1| PREDICTED: uncharacterized protein LOC100812171 [Glycine max]
          Length = 355

 Score =  180 bits (457), Expect = 9e-44
 Identities = 93/147 (63%), Positives = 102/147 (69%)
 Frame = +2

Query: 2   AVVNIGECERFKAVSTAQLLEKVDAIAYPQNNMGEKCMRPSFTNSTKQYYEMRKENSCNV 181
           AV N+GECERFKAV+TA LL+KVDA+AYPQN MGEKCM  SFTN T Q YE  K N CNV
Sbjct: 198 AVENMGECERFKAVTTAPLLQKVDAVAYPQNIMGEKCMHTSFTNGTNQCYETGKVNPCNV 257

Query: 182 TKHFLERIEEPDYXXXXXXXXXXXXXXXXXTNNDSGDTLAGPCQDEDILCSDAESLDVRD 361
           + HF ERIEEPDY                 +N  S DTLAGPCQ+ED L SDAESLDV D
Sbjct: 258 STHFFERIEEPDYSCSDLSSVGSCSVISSNSNKFSSDTLAGPCQEEDTLYSDAESLDVGD 317

Query: 362 VDKGCTISPKEVVAERIHRLELHAYHS 442
           VDKG + SPKEVVAE IHR  L   H+
Sbjct: 318 VDKGGSTSPKEVVAEIIHRASLGGLHA 344


>gb|AFK44933.1| unknown [Medicago truncatula]
          Length = 417

 Score =  143 bits (360), Expect = 2e-32
 Identities = 89/181 (49%), Positives = 97/181 (53%), Gaps = 33/181 (18%)
 Frame = +2

Query: 2   AVVNIGECERFKAVSTAQLLEKVDAIAYPQNNMGEKCMRPSFTNSTKQYYEMRKENSCNV 181
           AVV +GE +RFKAVS A LLEKVDAIAYPQN MGEK M  SFTN T      RKE  CN+
Sbjct: 198 AVVIMGESKRFKAVSAAPLLEKVDAIAYPQNTMGEKYMHYSFTNET------RKEKPCNI 251

Query: 182 TKHFLERIEEPDYXXXXXXXXXXXXXXXXXTNNDSGDTLAGPCQ---------------- 313
             HF E I+EPD+                  N   GDTLAGPCQ                
Sbjct: 252 KTHFPETIQEPDF-SSNMSSVGSCSVISGSANEFFGDTLAGPCQDDVSLRSDAESLDVKD 310

Query: 314 ----------------DEDILCS-DAESLDVRDVDKGCTISPKEVVAERIHRLELHAYHS 442
                           DED  CS DAES+D  DVD+GCT  PK+VV ERIHRLEL AYH 
Sbjct: 311 VGGFYGDMLAGPCRSDDEDTSCSDDAESIDAEDVDEGCTFFPKQVVVERIHRLELIAYHR 370

Query: 443 T 445
           T
Sbjct: 371 T 371


>ref|XP_003603435.1| RNA binding protein [Medicago truncatula]
           gi|355492483|gb|AES73686.1| RNA binding protein
           [Medicago truncatula]
          Length = 417

 Score =  143 bits (360), Expect = 2e-32
 Identities = 89/181 (49%), Positives = 97/181 (53%), Gaps = 33/181 (18%)
 Frame = +2

Query: 2   AVVNIGECERFKAVSTAQLLEKVDAIAYPQNNMGEKCMRPSFTNSTKQYYEMRKENSCNV 181
           AVV +GE +RFKAVS A LLEKVDAIAYPQN MGEK M  SFTN T      RKE  CN+
Sbjct: 198 AVVIMGESKRFKAVSAAPLLEKVDAIAYPQNTMGEKYMHYSFTNET------RKEKPCNI 251

Query: 182 TKHFLERIEEPDYXXXXXXXXXXXXXXXXXTNNDSGDTLAGPCQ---------------- 313
             HF E I+EPD+                  N   GDTLAGPCQ                
Sbjct: 252 KTHFPETIQEPDF-SSNMSSVGSCSVISGSANEFFGDTLAGPCQDDVSLRSDAESLDVKD 310

Query: 314 ----------------DEDILCS-DAESLDVRDVDKGCTISPKEVVAERIHRLELHAYHS 442
                           DED  CS DAES+D  DVD+GCT  PK+VV ERIHRLEL AYH 
Sbjct: 311 VGGFYGDMLAGPCRSDDEDTSCSDDAESIDAEDVDEGCTFFPKQVVVERIHRLELIAYHR 370

Query: 443 T 445
           T
Sbjct: 371 T 371


>ref|XP_003603436.1| ABC transporter G family member [Medicago truncatula]
           gi|355492484|gb|AES73687.1| ABC transporter G family
           member [Medicago truncatula]
          Length = 469

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 66/161 (40%), Positives = 74/161 (45%), Gaps = 31/161 (19%)
 Frame = +2

Query: 56  LLEKVDAIAYPQNN-MGEKCMRPSFTNSTKQYYEMRKENSCNVTKHFLERIEEPDYXXXX 232
           ++EKVDA+AYP NN  GEK M  S TN T Q YE RKE   +VT H  E IEEP Y    
Sbjct: 270 IMEKVDAVAYPHNNNTGEKYMHYSVTNCTDQLYESRKEKFSDVTTHVPETIEEPGYSYSN 329

Query: 233 XXXXXXXXXXXXXTNNDSGDTLAGPC------------------------------QDED 322
                         NN   +TLA PC                               +ED
Sbjct: 330 PSSVGSCSVIGGSANNFCNNTLADPCFEDDDSLHSDAEYVEDFDEIQSHMLAGPYQSEED 389

Query: 323 ILCSDAESLDVRDVDKGCTISPKEVVAERIHRLELHAYHST 445
            LC  AESLDV D+        KE VAERIHRLEL+AY  T
Sbjct: 390 TLCIVAESLDVEDLS-------KEAVAERIHRLELNAYLCT 423


>ref|XP_002282448.1| PREDICTED: uncharacterized protein LOC100264564 [Vitis vinifera]
          Length = 440

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 55/164 (33%), Positives = 70/164 (42%), Gaps = 31/164 (18%)
 Frame = +2

Query: 47  TAQLLEKVDAIAYPQNNMGEKCMRPSFTNSTKQYYEMRKENSCNVTKHFLERIEEPDYXX 226
           ++ L  KVDA+AYP+ N+GEK M  SF + + +Y EM +    N    FL R  E +   
Sbjct: 230 SSPLRAKVDAVAYPRLNLGEKYMHASFNDRSTKYCEMER-GKPNGVDCFLARSSESNDSD 288

Query: 227 XXXXXXXXXXXXXXXTNNDSGDTLAGPCQDEDILCSDAESL------------------- 349
                           N  S   LA P QD D LCSDAES                    
Sbjct: 289 SMSCSVGSCSINNNGPNKFSSCILAHPRQDTDDLCSDAESFYHWGDEGDEEDEEDERDER 348

Query: 350 ------------DVRDVDKGCTISPKEVVAERIHRLELHAYHST 445
                       DVRD ++ C IS ++ +A  IH LELHAY  T
Sbjct: 349 DEGDEEDERYEGDVRDEEEKCPISLEKELAASIHSLELHAYRRT 392


Top