BLASTX nr result

ID: Glycyrrhiza24_contig00023848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023848
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35368.1| unknown [Lotus japonicus]                              126   2e-27
ref|XP_003541012.1| PREDICTED: pentatricopeptide repeat-containi...   118   6e-25
gb|ACU24165.1| unknown [Glycine max]                                  118   6e-25
ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
ref|XP_003607688.1| Pentatricopeptide repeat-containing protein ...   114   8e-24

>gb|AFK35368.1| unknown [Lotus japonicus]
          Length = 285

 Score =  126 bits (316), Expect = 2e-27
 Identities = 58/71 (81%), Positives = 66/71 (92%)
 Frame = +1

Query: 1   DYWVDGCFRVINYCVQNNHLSSAIILFKQLKEKFENDELVTEVLFDAVFSIIAASESGQL 180
           DYWVDGCFRVI YCVQNNHLSSAI+LFKQLK+KFE+DE+  EVLFD+VFS+IA+S+S  L
Sbjct: 97  DYWVDGCFRVIKYCVQNNHLSSAIVLFKQLKDKFESDEIQLEVLFDSVFSVIASSKSTHL 156

Query: 181 QFGLDLLWAIK 213
           QFGLDLLWAIK
Sbjct: 157 QFGLDLLWAIK 167


>ref|XP_003541012.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Glycine max]
          Length = 346

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/71 (76%), Positives = 63/71 (88%)
 Frame = +1

Query: 1   DYWVDGCFRVINYCVQNNHLSSAIILFKQLKEKFENDELVTEVLFDAVFSIIAASESGQL 180
           DYWVDGCF+VI YC++N +LSSAI+LFKQLK+KF+NDE+VTE LFDAVFS+IA SE   L
Sbjct: 215 DYWVDGCFKVIMYCIRNKNLSSAIVLFKQLKDKFKNDEIVTEALFDAVFSLIAVSEFTHL 274

Query: 181 QFGLDLLWAIK 213
           Q GLDLLWAIK
Sbjct: 275 QIGLDLLWAIK 285


>gb|ACU24165.1| unknown [Glycine max]
          Length = 378

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/71 (76%), Positives = 63/71 (88%)
 Frame = +1

Query: 1   DYWVDGCFRVINYCVQNNHLSSAIILFKQLKEKFENDELVTEVLFDAVFSIIAASESGQL 180
           DYWVDGCF+VI YC++N +LSSAI+LFKQLK+KF+NDE+VTE LFDAVFS+IA SE   L
Sbjct: 247 DYWVDGCFKVIMYCIRNKNLSSAIVLFKQLKDKFKNDEIVTEALFDAVFSLIAVSEFTHL 306

Query: 181 QFGLDLLWAIK 213
           Q GLDLLWAIK
Sbjct: 307 QIGLDLLWAIK 317


>ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Glycine max]
          Length = 1117

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/71 (74%), Positives = 63/71 (88%)
 Frame = +1

Query: 1    DYWVDGCFRVINYCVQNNHLSSAIILFKQLKEKFENDELVTEVLFDAVFSIIAASESGQL 180
            DYWVDGCF+VI YC++N +LSS I+LFKQLK+KF+ND+LV E LFDAVFS+IA+SES  L
Sbjct: 949  DYWVDGCFKVIMYCIRNKNLSSTILLFKQLKDKFKNDDLVMEALFDAVFSLIASSESSHL 1008

Query: 181  QFGLDLLWAIK 213
            Q GLDLLWAIK
Sbjct: 1009 QIGLDLLWAIK 1019


>ref|XP_003607688.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355508743|gb|AES89885.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1353

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/71 (73%), Positives = 61/71 (85%)
 Frame = +1

Query: 1   DYWVDGCFRVINYCVQNNHLSSAIILFKQLKEKFENDELVTEVLFDAVFSIIAASESGQL 180
           +YWVDGCFRVI YCVQNNHLS+ + L KQLK+ FE+DE +TEVLFDA +S+IA  ES +L
Sbjct: 748 NYWVDGCFRVIQYCVQNNHLSTTVDLLKQLKDTFESDETMTEVLFDAAYSLIAGCESTRL 807

Query: 181 QFGLDLLWAIK 213
           QFGLDLLWAIK
Sbjct: 808 QFGLDLLWAIK 818


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