BLASTX nr result

ID: Glycyrrhiza24_contig00023844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023844
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subun...   229   2e-58
dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   224   7e-57
gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun...   217   9e-55
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai...   214   8e-54
sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carbox...   213   1e-53

>gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subunit [Jatropha
           curcas]
          Length = 181

 Score =  229 bits (584), Expect = 2e-58
 Identities = 107/126 (84%), Positives = 114/126 (90%)
 Frame = +1

Query: 1   PFTGLKSAAAFPATRKSADITSIASNGGRVSCMKVWPTEGGKKFETLSYLPPLTREQLLK 180
           PFTGLKS A FPA + + DITSIA NGGRV CMKVWPT+G KKFETLSYLPPLTREQL K
Sbjct: 27  PFTGLKSTAGFPARKTTNDITSIAGNGGRVQCMKVWPTQGLKKFETLSYLPPLTREQLAK 86

Query: 181 EVEYLLRSNLIPCLEFELKDGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVVNELD 360
           EVEYLLRS  +PCLEFEL+ GFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQV+NELD
Sbjct: 87  EVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELD 146

Query: 361 EAIKAY 378
           EAIKA+
Sbjct: 147 EAIKAH 152


>dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Eucalyptus globulus]
          Length = 181

 Score =  224 bits (570), Expect = 7e-57
 Identities = 102/126 (80%), Positives = 114/126 (90%)
 Frame = +1

Query: 1   PFTGLKSAAAFPATRKSADITSIASNGGRVSCMKVWPTEGGKKFETLSYLPPLTREQLLK 180
           PFTGLKSA+AFP TRKSADITS+ASNGGRV CM+VWP  G KKFETLSYLPPL+RE+LLK
Sbjct: 27  PFTGLKSASAFPVTRKSADITSLASNGGRVQCMQVWPPIGKKKFETLSYLPPLSREELLK 86

Query: 181 EVEYLLRSNLIPCLEFELKDGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVVNELD 360
           E+EYLLR N +PCLEFEL+ GFVYR+N++SPGYYDGRYWTMWKLPMFGCTD +QV  ELD
Sbjct: 87  EIEYLLRMNWVPCLEFELEKGFVYRDNHKSPGYYDGRYWTMWKLPMFGCTDPLQVFKELD 146

Query: 361 EAIKAY 378
           EAIK Y
Sbjct: 147 EAIKTY 152


>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus x
           domestica x Pyrus communis]
          Length = 179

 Score =  217 bits (552), Expect = 9e-55
 Identities = 101/126 (80%), Positives = 111/126 (88%)
 Frame = +1

Query: 1   PFTGLKSAAAFPATRKSADITSIASNGGRVSCMKVWPTEGGKKFETLSYLPPLTREQLLK 180
           PFTGLKS++AFP TRKS DITSIASNGGRV CM+VWP  G KKFETLSYLPPL+ E L K
Sbjct: 25  PFTGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSTESLAK 84

Query: 181 EVEYLLRSNLIPCLEFELKDGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVVNELD 360
           EV+YLLR N +PCLEFEL+ GFVYRENNRSPGYYDGRYWTMWKLPMFGCTD+ QV+ EL+
Sbjct: 85  EVDYLLRKNWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELE 144

Query: 361 EAIKAY 378
           EA KAY
Sbjct: 145 EAKKAY 150


>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
           precursor, putative [Ricinus communis]
           gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
           carboxylase small chain, chloroplast precursor, putative
           [Ricinus communis]
          Length = 185

 Score =  214 bits (544), Expect = 8e-54
 Identities = 101/127 (79%), Positives = 111/127 (87%), Gaps = 1/127 (0%)
 Frame = +1

Query: 1   PFTGLKSAAAFPATRKS-ADITSIASNGGRVSCMKVWPTEGGKKFETLSYLPPLTREQLL 177
           PFTGLKS +AFP TRK+  DIT++A+NGGRV CM+VWP  G KKFETLSYLP LTREQL 
Sbjct: 27  PFTGLKSTSAFPVTRKTNTDITTLANNGGRVQCMQVWPPLGKKKFETLSYLPDLTREQLA 86

Query: 178 KEVEYLLRSNLIPCLEFELKDGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVVNEL 357
           KEVEYLLR   +PCLEFEL+ GFVYREN RSPGYYDGRYWTMWKLPMFGC+DAVQV+ EL
Sbjct: 87  KEVEYLLRKGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCSDAVQVLKEL 146

Query: 358 DEAIKAY 378
           DEAIKAY
Sbjct: 147 DEAIKAY 153


>sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|218021|dbj|BAA00450.1| RuBisCO small
           subunit [Pyrus pyrifolia var. culta]
          Length = 183

 Score =  213 bits (542), Expect = 1e-53
 Identities = 99/126 (78%), Positives = 110/126 (87%)
 Frame = +1

Query: 1   PFTGLKSAAAFPATRKSADITSIASNGGRVSCMKVWPTEGGKKFETLSYLPPLTREQLLK 180
           PF GLKS++AFP TRKS DITSIASNGGRV CM+VWP  G KKFETLSYLPPL+ E L K
Sbjct: 29  PFNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAK 88

Query: 181 EVEYLLRSNLIPCLEFELKDGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVVNELD 360
           EV+YLLR N +PCLEFEL+ GFVYREN+RSPGYYDGRYWTMWKLPMFGCTD+ QV+ EL+
Sbjct: 89  EVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELE 148

Query: 361 EAIKAY 378
           EA KAY
Sbjct: 149 EAKKAY 154


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