BLASTX nr result

ID: Glycyrrhiza24_contig00023832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023832
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546298.1| PREDICTED: polygalacturonase At1g48100-like ...   125   5e-27
ref|XP_003546297.1| PREDICTED: polygalacturonase At1g48100-like ...   125   5e-27
ref|XP_003534803.1| PREDICTED: polygalacturonase At1g48100-like ...   125   5e-27
ref|XP_003594633.1| Polygalacturonase [Medicago truncatula] gi|3...   121   5e-26
gb|ABC87914.1| polygalacturonase precursor [Glycine max]              116   2e-24

>ref|XP_003546298.1| PREDICTED: polygalacturonase At1g48100-like isoform 2 [Glycine max]
          Length = 483

 Score =  125 bits (313), Expect = 5e-27
 Identities = 54/60 (90%), Positives = 60/60 (100%)
 Frame = -1

Query: 418 VACTNITLSDVELLPYEGELLDDPFCWNAYGTQETMTIPPIDCLREGEPETVVELSSYEC 239
           VACTNITLS++ELLPYEGELLDDPFCWNAYGTQETMTIPP+DCLREGEP+TVVELS+Y+C
Sbjct: 422 VACTNITLSEIELLPYEGELLDDPFCWNAYGTQETMTIPPLDCLREGEPDTVVELSAYDC 481


>ref|XP_003546297.1| PREDICTED: polygalacturonase At1g48100-like isoform 1 [Glycine max]
          Length = 479

 Score =  125 bits (313), Expect = 5e-27
 Identities = 54/60 (90%), Positives = 60/60 (100%)
 Frame = -1

Query: 418 VACTNITLSDVELLPYEGELLDDPFCWNAYGTQETMTIPPIDCLREGEPETVVELSSYEC 239
           VACTNITLS++ELLPYEGELLDDPFCWNAYGTQETMTIPP+DCLREGEP+TVVELS+Y+C
Sbjct: 418 VACTNITLSEIELLPYEGELLDDPFCWNAYGTQETMTIPPLDCLREGEPDTVVELSAYDC 477


>ref|XP_003534803.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
          Length = 474

 Score =  125 bits (313), Expect = 5e-27
 Identities = 54/60 (90%), Positives = 60/60 (100%)
 Frame = -1

Query: 418 VACTNITLSDVELLPYEGELLDDPFCWNAYGTQETMTIPPIDCLREGEPETVVELSSYEC 239
           VACTNITLS++ELLPYEGELLDDPFCWNAYGTQETMTIPP+DCLREGEP+TVVELS+Y+C
Sbjct: 413 VACTNITLSEIELLPYEGELLDDPFCWNAYGTQETMTIPPLDCLREGEPDTVVELSAYDC 472


>ref|XP_003594633.1| Polygalacturonase [Medicago truncatula] gi|355483681|gb|AES64884.1|
           Polygalacturonase [Medicago truncatula]
          Length = 463

 Score =  121 bits (304), Expect = 5e-26
 Identities = 52/61 (85%), Positives = 59/61 (96%)
 Frame = -1

Query: 418 VACTNITLSDVELLPYEGELLDDPFCWNAYGTQETMTIPPIDCLREGEPETVVELSSYEC 239
           VACTNITLS++ELLPYEGEL+DDPFCWNAYG QET+TIPP+DCLREG+PETVVELS YEC
Sbjct: 402 VACTNITLSEIELLPYEGELVDDPFCWNAYGRQETLTIPPLDCLREGQPETVVELSEYEC 461

Query: 238 S 236
           +
Sbjct: 462 N 462


>gb|ABC87914.1| polygalacturonase precursor [Glycine max]
          Length = 217

 Score =  116 bits (291), Expect = 2e-24
 Identities = 51/61 (83%), Positives = 58/61 (95%)
 Frame = -1

Query: 418 VACTNITLSDVELLPYEGELLDDPFCWNAYGTQETMTIPPIDCLREGEPETVVELSSYEC 239
           VACTNITLS+VELLP+EG LLDDPFCWNAYGTQET+TIPPI+CLREG+PETV +LS Y+C
Sbjct: 157 VACTNITLSEVELLPFEGALLDDPFCWNAYGTQETLTIPPINCLREGDPETVGDLSEYQC 216

Query: 238 S 236
           S
Sbjct: 217 S 217


Top