BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023823
         (814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528676.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   395   e-108
ref|XP_003610394.1| DEAD-box ATP-dependent RNA helicase [Medicag...   373   e-101
ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   343   3e-92
emb|CBI26203.3| unnamed protein product [Vitis vinifera]              336   4e-90
gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL i...   335   5e-90

>ref|XP_003528676.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Glycine max]
          Length = 472

 Score =  395 bits (1016), Expect = e-108
 Identities = 203/270 (75%), Positives = 223/270 (82%)
 Frame = +2

Query: 5   LRLLSSTNNNINRVFKFTAPQAIVNPSXXXXXXXXXXXXXXLRELCQARVPDHVLQRMEE 184
           L+  SS+  N+    K   PQAI+N S              LRELCQ+ VP+H+LQRMEE
Sbjct: 38  LKHFSSSTTNL----KLGTPQAILNTSPIAPSEVTTPT---LRELCQSHVPEHILQRMEE 90

Query: 185 VGYVMPTDIQRQALPYLFSGRDCILHAQTGSGKXXXXXXXXXXXXNARKSSVQALVLVPT 364
           +GYVMPTDIQR+ALPYLFSG DCILHAQTGSGK            NA KSSVQALVLVPT
Sbjct: 91  IGYVMPTDIQREALPYLFSGLDCILHAQTGSGKTLTYLLLIHSIINAAKSSVQALVLVPT 150

Query: 365 RELGMQVTKVARMLAAKPTGVEGEQKSCIIMALLDGGTLRRHKSWLKAEPPTVLVATVGS 544
           RELGMQVTKVAR LAAKPTGV+GEQKSC IMALLDGGTL+RHK+WLKAEPPT++VATVGS
Sbjct: 151 RELGMQVTKVARTLAAKPTGVDGEQKSCSIMALLDGGTLKRHKTWLKAEPPTIVVATVGS 210

Query: 545 LCQMLERHFFSLETLQVLVVDEVDFIFNSSTQVNSLRKILTSYSSCNNRQTVFASASIPQ 724
           LCQMLERHFFSLET++VL+VDEVD IFNSS QV+SLRKILTSYSSCNNRQTVFASASIPQ
Sbjct: 211 LCQMLERHFFSLETVRVLIVDEVDCIFNSSKQVSSLRKILTSYSSCNNRQTVFASASIPQ 270

Query: 725 HNRFLHDSVQQKWTKSDVIHIHVSKVEPMP 814
           HNRF+HDSVQQKWTK DV+HIHVS VEPMP
Sbjct: 271 HNRFIHDSVQQKWTKRDVVHIHVSAVEPMP 300


>ref|XP_003610394.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|217074248|gb|ACJ85484.1| unknown [Medicago
           truncatula] gi|355511449|gb|AES92591.1| DEAD-box
           ATP-dependent RNA helicase [Medicago truncatula]
           gi|388507084|gb|AFK41608.1| unknown [Medicago
           truncatula]
          Length = 480

 Score =  373 bits (957), Expect = e-101
 Identities = 197/269 (73%), Positives = 215/269 (79%), Gaps = 3/269 (1%)
 Frame = +2

Query: 17  SSTNNNINRVFKFTA-PQAIVNPSXXXXXXXXXXXXXX--LRELCQARVPDHVLQRMEEV 187
           SSTN N +RV   T  P AI NP+                LR+LCQ+ VPD +LQRMEEV
Sbjct: 40  SSTNINHHRVTTTTTTPLAIANPTSAIIPPTADDDTVPITLRQLCQSHVPDQLLQRMEEV 99

Query: 188 GYVMPTDIQRQALPYLFSGRDCILHAQTGSGKXXXXXXXXXXXXNARKSSVQALVLVPTR 367
           GYVMPT +Q+QALP LFSGRDCILHAQTGSGK            + RKSS QALVLVPTR
Sbjct: 100 GYVMPTPVQKQALPRLFSGRDCILHAQTGSGKTLAYLLLIYSIISTRKSSFQALVLVPTR 159

Query: 368 ELGMQVTKVARMLAAKPTGVEGEQKSCIIMALLDGGTLRRHKSWLKAEPPTVLVATVGSL 547
           ELGMQVTKVAR+LAAKPTGVEGEQ+SC IMALLDGGTLRRHKSW KAEPP ++VATV SL
Sbjct: 160 ELGMQVTKVARILAAKPTGVEGEQRSCTIMALLDGGTLRRHKSWFKAEPPAIVVATVESL 219

Query: 548 CQMLERHFFSLETLQVLVVDEVDFIFNSSTQVNSLRKILTSYSSCNNRQTVFASASIPQH 727
           CQMLER  FSL  L+VLVVDEVDFIFNSS QV+SLRKILTSYSSCNNRQTVFASASIPQH
Sbjct: 220 CQMLERQLFSLGNLRVLVVDEVDFIFNSSKQVSSLRKILTSYSSCNNRQTVFASASIPQH 279

Query: 728 NRFLHDSVQQKWTKSDVIHIHVSKVEPMP 814
           N+FL+++VQQKWTK DVIHIHVS VEPMP
Sbjct: 280 NQFLNEAVQQKWTKRDVIHIHVSPVEPMP 308


>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Vitis vinifera]
          Length = 482

 Score =  343 bits (880), Expect = 3e-92
 Identities = 168/250 (67%), Positives = 200/250 (80%)
 Frame = +2

Query: 65  QAIVNPSXXXXXXXXXXXXXXLRELCQARVPDHVLQRMEEVGYVMPTDIQRQALPYLFSG 244
           QA +N S              LRE+CQ  VP+HVL+R+EEVG+++PTD+Q+QALP L SG
Sbjct: 57  QATLNSSSITEASDIGERTLTLREICQGCVPEHVLRRIEEVGFIVPTDVQQQALPVLLSG 116

Query: 245 RDCILHAQTGSGKXXXXXXXXXXXXNARKSSVQALVLVPTRELGMQVTKVARMLAAKPTG 424
           RDCILHAQTGSGK            N + S+VQAL++VPTRELG+QVTKVARMLAAKP  
Sbjct: 117 RDCILHAQTGSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGIQVTKVARMLAAKPME 176

Query: 425 VEGEQKSCIIMALLDGGTLRRHKSWLKAEPPTVLVATVGSLCQMLERHFFSLETLQVLVV 604
            E EQKSC +MALLDGG L+RHKSWLKAEPPT++VATV SLCQMLE+  F LE+++VLV+
Sbjct: 177 PELEQKSCTVMALLDGGMLKRHKSWLKAEPPTIVVATVRSLCQMLEKQIFKLESMRVLVI 236

Query: 605 DEVDFIFNSSTQVNSLRKILTSYSSCNNRQTVFASASIPQHNRFLHDSVQQKWTKSDVIH 784
           DEVDF+FN+S QV SLRK+LTSYSS NNRQTVFASASIPQH RFLHD +QQKWTKSDV+H
Sbjct: 237 DEVDFMFNASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRRFLHDCIQQKWTKSDVVH 296

Query: 785 IHVSKVEPMP 814
           +HV+ +EPMP
Sbjct: 297 VHVNPIEPMP 306


>emb|CBI26203.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  336 bits (861), Expect = 4e-90
 Identities = 167/254 (65%), Positives = 199/254 (78%), Gaps = 4/254 (1%)
 Frame = +2

Query: 65  QAIVNPSXXXXXXXXXXXXXXLRELCQARVPDHVLQ----RMEEVGYVMPTDIQRQALPY 232
           QA +N S              LRE+CQ  VP+HV+     R+EEVG+++PTD+Q+QALP 
Sbjct: 57  QATLNSSSITEASDIGERTLTLREICQGCVPEHVIALICFRIEEVGFIVPTDVQQQALPV 116

Query: 233 LFSGRDCILHAQTGSGKXXXXXXXXXXXXNARKSSVQALVLVPTRELGMQVTKVARMLAA 412
           L SGRDCILHAQTGSGK            N + S+VQAL++VPTRELG+QVTKVARMLAA
Sbjct: 117 LLSGRDCILHAQTGSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGIQVTKVARMLAA 176

Query: 413 KPTGVEGEQKSCIIMALLDGGTLRRHKSWLKAEPPTVLVATVGSLCQMLERHFFSLETLQ 592
           KP   E EQKSC +MALLDGG L+RHKSWLKAEPPT++VATV SLCQMLE+  F LE+++
Sbjct: 177 KPMEPELEQKSCTVMALLDGGMLKRHKSWLKAEPPTIVVATVRSLCQMLEKQIFKLESMR 236

Query: 593 VLVVDEVDFIFNSSTQVNSLRKILTSYSSCNNRQTVFASASIPQHNRFLHDSVQQKWTKS 772
           VLV+DEVDF+FN+S QV SLRK+LTSYSS NNRQTVFASASIPQH RFLHD +QQKWTKS
Sbjct: 237 VLVIDEVDFMFNASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRRFLHDCIQQKWTKS 296

Query: 773 DVIHIHVSKVEPMP 814
           DV+H+HV+ +EPMP
Sbjct: 297 DVVHVHVNPIEPMP 310


>gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
           gi|11385590|gb|AAG34876.1|AF261021_1 putative
           chloroplast RNA helicase VDL isoform 1 [Nicotiana
           tabacum]
          Length = 466

 Score =  335 bits (860), Expect = 5e-90
 Identities = 156/229 (68%), Positives = 196/229 (85%)
 Frame = +2

Query: 128 LRELCQARVPDHVLQRMEEVGYVMPTDIQRQALPYLFSGRDCILHAQTGSGKXXXXXXXX 307
           LRELC   VP+HV++R+EEVGYV+PT++Q QALP+L+SGRDC+LHAQTGSGK        
Sbjct: 66  LRELCHGHVPEHVIRRVEEVGYVIPTEVQLQALPFLYSGRDCVLHAQTGSGKTLAYLLQI 125

Query: 308 XXXXNARKSSVQALVLVPTRELGMQVTKVARMLAAKPTGVEGEQKSCIIMALLDGGTLRR 487
               ++++S+VQAL++VPTRELGMQVTKVARMLAAKP+ +E   KSC +MALLDGG L R
Sbjct: 126 LSVIDSQRSAVQALIVVPTRELGMQVTKVARMLAAKPSELESGPKSCTVMALLDGGMLNR 185

Query: 488 HKSWLKAEPPTVLVATVGSLCQMLERHFFSLETLQVLVVDEVDFIFNSSTQVNSLRKILT 667
           HKSWLKAEPPT++VAT+GSLCQMLE+H   L++ QVLVVDEVDF+FNSS +++SL+++LT
Sbjct: 186 HKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFNSSKEISSLKRLLT 245

Query: 668 SYSSCNNRQTVFASASIPQHNRFLHDSVQQKWTKSDVIHIHVSKVEPMP 814
           SYS+  NRQT+FASASIPQH RFL+D VQQKWTK+DV+H+HV+ VEPMP
Sbjct: 246 SYSTSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHVNSVEPMP 294