BLASTX nr result

ID: Glycyrrhiza24_contig00023809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023809
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519572.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   243   2e-62
ref|XP_003544936.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   240   1e-61
ref|XP_003617524.1| ATP-dependent RNA helicase DBP4 [Medicago tr...   216   3e-54
ref|XP_004164669.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   212   3e-53
ref|XP_004152924.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   212   3e-53

>ref|XP_003519572.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine
           max]
          Length = 746

 Score =  243 bits (619), Expect = 2e-62
 Identities = 120/140 (85%), Positives = 127/140 (90%)
 Frame = +1

Query: 136 MRRPKSKEFRKQQRVSEEEEIKLLESWIQCQKPESGSNPMSLPPLRKNDPVGRLNDDNTF 315
           MRRPKS+EFRKQQRVSEEEEI LL SWIQ Q P+SGSNPMSLPPL KN PVGRL+DD+T+
Sbjct: 1   MRRPKSREFRKQQRVSEEEEINLLNSWIQFQPPDSGSNPMSLPPLPKNSPVGRLDDDDTY 60

Query: 316 SRYAGAVRFDHLPLSKKTKDGLRGSKFVSMTDIQRASLPHALCGRDILGAAKTGSGKTLA 495
           SRYAGA RF+  PLSKKTKD LR SKFV MTDIQRASLPHALCGRDILGAAKTGSGKTLA
Sbjct: 61  SRYAGASRFEQFPLSKKTKDALRESKFVVMTDIQRASLPHALCGRDILGAAKTGSGKTLA 120

Query: 496 FIIPVLEKLYRERWRPEDGV 555
           FIIPVLEKL+RERW PEDGV
Sbjct: 121 FIIPVLEKLHRERWGPEDGV 140


>ref|XP_003544936.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine
           max]
          Length = 743

 Score =  240 bits (613), Expect = 1e-61
 Identities = 122/140 (87%), Positives = 126/140 (90%)
 Frame = +1

Query: 136 MRRPKSKEFRKQQRVSEEEEIKLLESWIQCQKPESGSNPMSLPPLRKNDPVGRLNDDNTF 315
           MRRPKSKEFRKQQRVSEEEEI LL SWIQ Q P+SGSNPMSLP L KN PVGRL +DNT+
Sbjct: 1   MRRPKSKEFRKQQRVSEEEEINLLNSWIQFQPPDSGSNPMSLPRLPKNSPVGRL-EDNTY 59

Query: 316 SRYAGAVRFDHLPLSKKTKDGLRGSKFVSMTDIQRASLPHALCGRDILGAAKTGSGKTLA 495
           SRYAGA RFD  PLSKKTKD LR SKFV+MTDIQRASLPHALCGRDILGAAKTGSGKTLA
Sbjct: 60  SRYAGASRFDQFPLSKKTKDALRESKFVAMTDIQRASLPHALCGRDILGAAKTGSGKTLA 119

Query: 496 FIIPVLEKLYRERWRPEDGV 555
           FIIPVLEKLYRERW PEDGV
Sbjct: 120 FIIPVLEKLYRERWGPEDGV 139


>ref|XP_003617524.1| ATP-dependent RNA helicase DBP4 [Medicago truncatula]
           gi|355518859|gb|AET00483.1| ATP-dependent RNA helicase
           DBP4 [Medicago truncatula]
          Length = 747

 Score =  216 bits (549), Expect = 3e-54
 Identities = 115/149 (77%), Positives = 123/149 (82%), Gaps = 9/149 (6%)
 Frame = +1

Query: 136 MRRPK-SKEFRKQQRVSEEEEIKLLESWIQCQKPESGSNPMSLPPLRKNDPVGRLNDDNT 312
           MR+PK SK+FRKQQR SE ++I LL SWIQ QKP+SGSNPMSLPPL KN PVGRL D  T
Sbjct: 1   MRKPKPSKQFRKQQRDSELDKINLLNSWIQSQKPDSGSNPMSLPPLPKNSPVGRLAD-GT 59

Query: 313 FSRYAGAVRFDHLPLSKKTKDGLRG--------SKFVSMTDIQRASLPHALCGRDILGAA 468
           FSRYAG VRFD LP+SKKTKDGL          SKFVSMT IQRASLPHALCGRD+LGAA
Sbjct: 60  FSRYAGVVRFDQLPISKKTKDGLISKKTQDELHSKFVSMTKIQRASLPHALCGRDVLGAA 119

Query: 469 KTGSGKTLAFIIPVLEKLYRERWRPEDGV 555
           KTGSGKTLAFIIPVLEKL+RERW  EDGV
Sbjct: 120 KTGSGKTLAFIIPVLEKLHRERWGTEDGV 148


>ref|XP_004164669.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Cucumis
           sativus]
          Length = 734

 Score =  212 bits (540), Expect = 3e-53
 Identities = 104/136 (76%), Positives = 118/136 (86%)
 Frame = +1

Query: 148 KSKEFRKQQRVSEEEEIKLLESWIQCQKPESGSNPMSLPPLRKNDPVGRLNDDNTFSRYA 327
           KSK   KQ+R+SE EEIKLL SWI+ QKP+SGSNPMSLPP   N P+GR++DD T+SRYA
Sbjct: 6   KSKNSGKQKRLSENEEIKLLNSWIESQKPDSGSNPMSLPPPPPNAPIGRIDDD-TYSRYA 64

Query: 328 GAVRFDHLPLSKKTKDGLRGSKFVSMTDIQRASLPHALCGRDILGAAKTGSGKTLAFIIP 507
           GA RFD LP+S KTKDGLR ++F+ MTDIQ+ASLPHALCGRDILGAAKTGSGKTLAF+IP
Sbjct: 65  GATRFDQLPISSKTKDGLRKAEFIDMTDIQKASLPHALCGRDILGAAKTGSGKTLAFLIP 124

Query: 508 VLEKLYRERWRPEDGV 555
           VLEKLYRERW PE GV
Sbjct: 125 VLEKLYRERWGPEFGV 140


>ref|XP_004152924.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Cucumis
           sativus]
          Length = 734

 Score =  212 bits (540), Expect = 3e-53
 Identities = 104/136 (76%), Positives = 118/136 (86%)
 Frame = +1

Query: 148 KSKEFRKQQRVSEEEEIKLLESWIQCQKPESGSNPMSLPPLRKNDPVGRLNDDNTFSRYA 327
           KSK   KQ+R+SE EEIKLL SWI+ QKP+SGSNPMSLPP   N P+GR++DD T+SRYA
Sbjct: 6   KSKNSGKQKRLSENEEIKLLNSWIESQKPDSGSNPMSLPPPLPNAPIGRIDDD-TYSRYA 64

Query: 328 GAVRFDHLPLSKKTKDGLRGSKFVSMTDIQRASLPHALCGRDILGAAKTGSGKTLAFIIP 507
           GA RFD LP+S KTKDGLR ++F+ MTDIQ+ASLPHALCGRDILGAAKTGSGKTLAF+IP
Sbjct: 65  GATRFDQLPISSKTKDGLRKAEFIDMTDIQKASLPHALCGRDILGAAKTGSGKTLAFLIP 124

Query: 508 VLEKLYRERWRPEDGV 555
           VLEKLYRERW PE GV
Sbjct: 125 VLEKLYRERWGPEFGV 140


Top