BLASTX nr result

ID: Glycyrrhiza24_contig00023798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023798
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535496.1| PREDICTED: conserved oligomeric Golgi comple...   224   6e-57
ref|XP_003555463.1| PREDICTED: conserved oligomeric Golgi comple...   220   1e-55
ref|XP_002311274.1| predicted protein [Populus trichocarpa] gi|2...   180   2e-43
ref|XP_002871714.1| hypothetical protein ARALYDRAFT_488483 [Arab...   177   1e-42
ref|XP_002316166.1| predicted protein [Populus trichocarpa] gi|2...   177   1e-42

>ref|XP_003535496.1| PREDICTED: conserved oligomeric Golgi complex subunit 1-like
           [Glycine max]
          Length = 1059

 Score =  224 bits (572), Expect = 6e-57
 Identities = 119/154 (77%), Positives = 124/154 (80%), Gaps = 2/154 (1%)
 Frame = -3

Query: 458 MRVSSPAAATP--HADDHRISTLGHRDAESLFRSKPIAEIRNTESATRKQIDDKKEELRQ 285
           MRVSSPAAA+P   ADDHRIST+G RDAESLFRSKPIAEIR TE+ATRKQI+DKKEELRQ
Sbjct: 1   MRVSSPAAASPLPRADDHRISTIGSRDAESLFRSKPIAEIRKTEAATRKQIEDKKEELRQ 60

Query: 284 LVGNRYRDLIDSADSIVRMKASCTSISANIAAVHHRIRXXXXXXXXXXXXXXXXXXSRAW 105
           LVGNRYRDLIDSADSIVRMK SC  IS NIA VH RIR                  SRAW
Sbjct: 61  LVGNRYRDLIDSADSIVRMKGSCNGISGNIAVVHDRIR--SLSQSQSQSQTKLHSQSRAW 118

Query: 104 TYGIACRVKYLVDTPENIWGCLDEGMFLEAASRY 3
           TYG ACRVKY+VDTPENIWGCLDEGMFLEAASRY
Sbjct: 119 TYGAACRVKYIVDTPENIWGCLDEGMFLEAASRY 152


>ref|XP_003555463.1| PREDICTED: conserved oligomeric Golgi complex subunit 1-like
           [Glycine max]
          Length = 1059

 Score =  220 bits (560), Expect = 1e-55
 Identities = 118/154 (76%), Positives = 122/154 (79%), Gaps = 2/154 (1%)
 Frame = -3

Query: 458 MRVSSPAAATP--HADDHRISTLGHRDAESLFRSKPIAEIRNTESATRKQIDDKKEELRQ 285
           MRVSSP  A P  HAD+HRI TLG RDAESLFRSKPIAEIR TE+ATRKQI+DKKEELRQ
Sbjct: 1   MRVSSPDTAAPSLHADEHRIFTLGSRDAESLFRSKPIAEIRKTEAATRKQIEDKKEELRQ 60

Query: 284 LVGNRYRDLIDSADSIVRMKASCTSISANIAAVHHRIRXXXXXXXXXXXXXXXXXXSRAW 105
           LVGNRYRDLIDSADSIV MK SC  IS+NIAAVH RIR                  SRAW
Sbjct: 61  LVGNRYRDLIDSADSIVLMKVSCNGISSNIAAVHGRIR--SLSQSQSQSQTKLHSQSRAW 118

Query: 104 TYGIACRVKYLVDTPENIWGCLDEGMFLEAASRY 3
           TYG ACRVKYLVDTPENIWGCLDEGMFLEAASRY
Sbjct: 119 TYGAACRVKYLVDTPENIWGCLDEGMFLEAASRY 152


>ref|XP_002311274.1| predicted protein [Populus trichocarpa] gi|222851094|gb|EEE88641.1|
           predicted protein [Populus trichocarpa]
          Length = 1071

 Score =  180 bits (456), Expect = 2e-43
 Identities = 101/155 (65%), Positives = 111/155 (71%), Gaps = 3/155 (1%)
 Frame = -3

Query: 458 MRVSSPAAATPHADDHRISTL---GHRDAESLFRSKPIAEIRNTESATRKQIDDKKEELR 288
           MRVS     TP A D R +TL   G+RDAESL RSK I+EIRN ESATR+QI++KKEELR
Sbjct: 1   MRVS-----TPSATDDRAATLSGGGYRDAESLLRSKTISEIRNVESATRQQIEEKKEELR 55

Query: 287 QLVGNRYRDLIDSADSIVRMKASCTSISANIAAVHHRIRXXXXXXXXXXXXXXXXXXSRA 108
           QLVGNRYRDLIDSADSIV MK+ C SIS NIA++H  IR                  +R 
Sbjct: 56  QLVGNRYRDLIDSADSIVLMKSYCGSISHNIASIHISIRSLSASPLSETPKFTNPSSTRG 115

Query: 107 WTYGIACRVKYLVDTPENIWGCLDEGMFLEAASRY 3
             YGIACRVKYLVDTPENIWGCLDE MFLEAA RY
Sbjct: 116 KIYGIACRVKYLVDTPENIWGCLDEFMFLEAAGRY 150


>ref|XP_002871714.1| hypothetical protein ARALYDRAFT_488483 [Arabidopsis lyrata subsp.
           lyrata] gi|297317551|gb|EFH47973.1| hypothetical protein
           ARALYDRAFT_488483 [Arabidopsis lyrata subsp. lyrata]
          Length = 1067

 Score =  177 bits (449), Expect = 1e-42
 Identities = 90/131 (68%), Positives = 98/131 (74%)
 Frame = -3

Query: 395 GHRDAESLFRSKPIAEIRNTESATRKQIDDKKEELRQLVGNRYRDLIDSADSIVRMKASC 216
           G RDAESLFR+KP++EIRN ESATRK I+DKKEELRQLVG RYRDLIDSADSIV MK+ C
Sbjct: 22  GQRDAESLFRTKPMSEIRNVESATRKNIEDKKEELRQLVGTRYRDLIDSADSIVHMKSLC 81

Query: 215 TSISANIAAVHHRIRXXXXXXXXXXXXXXXXXXSRAWTYGIACRVKYLVDTPENIWGCLD 36
            SISANI+++H  IR                   R   YGIACRVKYLVDTPENIWGCLD
Sbjct: 82  ESISANISSIHGNIRSLSSSSVAETPKLASLNPVRVNVYGIACRVKYLVDTPENIWGCLD 141

Query: 35  EGMFLEAASRY 3
           E MFLEAA RY
Sbjct: 142 ESMFLEAAGRY 152


>ref|XP_002316166.1| predicted protein [Populus trichocarpa] gi|222865206|gb|EEF02337.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score =  177 bits (448), Expect = 1e-42
 Identities = 98/155 (63%), Positives = 109/155 (70%), Gaps = 3/155 (1%)
 Frame = -3

Query: 458 MRVSSPAAATPHADDHRISTL---GHRDAESLFRSKPIAEIRNTESATRKQIDDKKEELR 288
           MRVS     T    D R +TL   G+RDAESLFR+K I EIRN ES TR+QI++KKEELR
Sbjct: 1   MRVS-----TTSVTDERAATLSGGGYRDAESLFRTKAIPEIRNVESETRQQIEEKKEELR 55

Query: 287 QLVGNRYRDLIDSADSIVRMKASCTSISANIAAVHHRIRXXXXXXXXXXXXXXXXXXSRA 108
           QLVGNRYRDLIDSADSIV MK+ C SIS NIA++H  IR                  +R 
Sbjct: 56  QLVGNRYRDLIDSADSIVHMKSYCESISRNIASIHTNIRSLSASPLSETPKFTSPNSTRG 115

Query: 107 WTYGIACRVKYLVDTPENIWGCLDEGMFLEAASRY 3
            +YGIACRVKYLVDTPENIWGCLDE MFLEAA RY
Sbjct: 116 DSYGIACRVKYLVDTPENIWGCLDEFMFLEAAGRY 150


Top