BLASTX nr result

ID: Glycyrrhiza24_contig00023762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023762
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607892.1| RuBisCO large subunit-binding protein subuni...   175   4e-42
gb|ABC75363.2| GroEL-like chaperone, ATPase [Medicago truncatula]     175   4e-42
ref|XP_003556668.1| PREDICTED: ruBisCO large subunit-binding pro...   171   4e-41
ref|XP_003528549.1| PREDICTED: ruBisCO large subunit-binding pro...   171   7e-41
ref|XP_002528171.1| rubisco subunit binding-protein alpha subuni...   159   3e-37

>ref|XP_003607892.1| RuBisCO large subunit-binding protein subunit alpha [Medicago
           truncatula] gi|355508947|gb|AES90089.1| RuBisCO large
           subunit-binding protein subunit alpha [Medicago
           truncatula]
          Length = 579

 Score =  175 bits (443), Expect = 4e-42
 Identities = 92/98 (93%), Positives = 95/98 (96%)
 Frame = +1

Query: 1   ECREALQAGIDKLADAVSLTIGPKGRNVILSESGKLKVINDGVTIARSIQLSDAIENAGA 180
           ECRE LQ GIDKLADAVSLT+GPKGRNVILSESGKLKVINDGVTIARSI+LSDAIENAGA
Sbjct: 49  ECRENLQVGIDKLADAVSLTVGPKGRNVILSESGKLKVINDGVTIARSIELSDAIENAGA 108

Query: 181 MLIQEVASKMNDLAGDGTSTAIILARAMIRHGLSAVAF 294
           MLIQEVASKMNDLAGDGTSTAIILARAMI+ GLSAVAF
Sbjct: 109 MLIQEVASKMNDLAGDGTSTAIILARAMIKSGLSAVAF 146


>gb|ABC75363.2| GroEL-like chaperone, ATPase [Medicago truncatula]
          Length = 595

 Score =  175 bits (443), Expect = 4e-42
 Identities = 92/98 (93%), Positives = 95/98 (96%)
 Frame = +1

Query: 1   ECREALQAGIDKLADAVSLTIGPKGRNVILSESGKLKVINDGVTIARSIQLSDAIENAGA 180
           ECRE LQ GIDKLADAVSLT+GPKGRNVILSESGKLKVINDGVTIARSI+LSDAIENAGA
Sbjct: 49  ECRENLQVGIDKLADAVSLTVGPKGRNVILSESGKLKVINDGVTIARSIELSDAIENAGA 108

Query: 181 MLIQEVASKMNDLAGDGTSTAIILARAMIRHGLSAVAF 294
           MLIQEVASKMNDLAGDGTSTAIILARAMI+ GLSAVAF
Sbjct: 109 MLIQEVASKMNDLAGDGTSTAIILARAMIKSGLSAVAF 146


>ref|XP_003556668.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
           chloroplastic-like [Glycine max]
          Length = 589

 Score =  171 bits (434), Expect = 4e-41
 Identities = 90/98 (91%), Positives = 95/98 (96%)
 Frame = +1

Query: 1   ECREALQAGIDKLADAVSLTIGPKGRNVILSESGKLKVINDGVTIARSIQLSDAIENAGA 180
           ECREALQAGIDKLADAVSLT+GPKGRNVILSESG LKVINDGVTIARSI+LSDAIENAGA
Sbjct: 59  ECREALQAGIDKLADAVSLTVGPKGRNVILSESGNLKVINDGVTIARSIELSDAIENAGA 118

Query: 181 MLIQEVASKMNDLAGDGTSTAIILARAMIRHGLSAVAF 294
           +LIQEVASKMN+LAGDGTSTAIILARAMI+ GL AVAF
Sbjct: 119 ILIQEVASKMNELAGDGTSTAIILARAMIKSGLLAVAF 156


>ref|XP_003528549.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
           chloroplastic-like [Glycine max]
          Length = 548

 Score =  171 bits (432), Expect = 7e-41
 Identities = 90/98 (91%), Positives = 94/98 (95%)
 Frame = +1

Query: 1   ECREALQAGIDKLADAVSLTIGPKGRNVILSESGKLKVINDGVTIARSIQLSDAIENAGA 180
           ECREALQAGIDKLADAVSLT+GPKGRNVILSESG LKVINDGVTIARSI+LSDAIENAGA
Sbjct: 18  ECREALQAGIDKLADAVSLTVGPKGRNVILSESGNLKVINDGVTIARSIELSDAIENAGA 77

Query: 181 MLIQEVASKMNDLAGDGTSTAIILARAMIRHGLSAVAF 294
           +LIQEVASKMN+LAGDGTSTAIILARAMI  GL AVAF
Sbjct: 78  ILIQEVASKMNELAGDGTSTAIILARAMIESGLLAVAF 115


>ref|XP_002528171.1| rubisco subunit binding-protein alpha subunit, ruba, putative
           [Ricinus communis] gi|223532428|gb|EEF34222.1| rubisco
           subunit binding-protein alpha subunit, ruba, putative
           [Ricinus communis]
          Length = 556

 Score =  159 bits (401), Expect = 3e-37
 Identities = 80/98 (81%), Positives = 93/98 (94%)
 Frame = +1

Query: 1   ECREALQAGIDKLADAVSLTIGPKGRNVILSESGKLKVINDGVTIARSIQLSDAIENAGA 180
           ECREALQ+GIDKLADAVS+T+GP+GRNV+LS+S  LKV+NDGVTIAR+I+LSD +ENAGA
Sbjct: 26  ECREALQSGIDKLADAVSVTLGPRGRNVVLSDSKTLKVVNDGVTIARAIELSDTMENAGA 85

Query: 181 MLIQEVASKMNDLAGDGTSTAIILARAMIRHGLSAVAF 294
           MLIQEVA+KMNDLAGDGT+TAIILARAMI+ GL AVAF
Sbjct: 86  MLIQEVANKMNDLAGDGTTTAIILARAMIKMGLLAVAF 123


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