BLASTX nr result

ID: Glycyrrhiza24_contig00023749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023749
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593449.1| Cotton fiber expressed protein [Medicago tru...    87   1e-15
gb|AAC33276.1| cotton fiber expressed protein 1 [Gossypium hirsu...    77   1e-12
gb|AAY85179.1| fiber expressed protein [Gossypium hirsutum]            77   1e-12
ref|XP_003541746.1| PREDICTED: uncharacterized protein LOC100794...    75   4e-12
ref|XP_002316652.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12

>ref|XP_003593449.1| Cotton fiber expressed protein [Medicago truncatula]
           gi|355482497|gb|AES63700.1| Cotton fiber expressed
           protein [Medicago truncatula]
          Length = 280

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/49 (87%), Positives = 45/49 (91%), Gaps = 1/49 (2%)
 Frame = +3

Query: 60  FNFN-KAGRLRKEPSLSQDELNRRVEAFIHKFNQQMRLQRQESLNHYMH 203
           FNFN K  +LRKEPSLSQDELN+RVEAFI KFNQQMRLQRQESLNHYMH
Sbjct: 225 FNFNNKTWKLRKEPSLSQDELNKRVEAFIRKFNQQMRLQRQESLNHYMH 273


>gb|AAC33276.1| cotton fiber expressed protein 1 [Gossypium hirsutum]
          Length = 331

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/46 (80%), Positives = 41/46 (89%)
 Frame = +3

Query: 63  NFNKAGRLRKEPSLSQDELNRRVEAFIHKFNQQMRLQRQESLNHYM 200
           +F  +G+LRKEPSLSQDELNRRVEAFI KFN +MRLQRQESLN YM
Sbjct: 279 SFPASGKLRKEPSLSQDELNRRVEAFIKKFNDEMRLQRQESLNQYM 324


>gb|AAY85179.1| fiber expressed protein [Gossypium hirsutum]
          Length = 331

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/46 (80%), Positives = 41/46 (89%)
 Frame = +3

Query: 63  NFNKAGRLRKEPSLSQDELNRRVEAFIHKFNQQMRLQRQESLNHYM 200
           +F  +G+LRKEPSLSQDELNRRVEAFI KFN +MRLQRQESLN YM
Sbjct: 279 SFPASGKLRKEPSLSQDELNRRVEAFIKKFNDEMRLQRQESLNQYM 324


>ref|XP_003541746.1| PREDICTED: uncharacterized protein LOC100794998 [Glycine max]
          Length = 270

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/42 (85%), Positives = 39/42 (92%)
 Frame = +3

Query: 75  AGRLRKEPSLSQDELNRRVEAFIHKFNQQMRLQRQESLNHYM 200
           +GRLRKEPSLSQDELNRRVEAFI KFNQ+MRLQRQ+SL  YM
Sbjct: 221 SGRLRKEPSLSQDELNRRVEAFIQKFNQEMRLQRQQSLEQYM 262


>ref|XP_002316652.1| predicted protein [Populus trichocarpa] gi|222859717|gb|EEE97264.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 35/41 (85%), Positives = 39/41 (95%)
 Frame = +3

Query: 75  AGRLRKEPSLSQDELNRRVEAFIHKFNQQMRLQRQESLNHY 197
           +G+LRKEPSLSQDELNRRVEAFI KFN++MRLQRQESLN Y
Sbjct: 277 SGKLRKEPSLSQDELNRRVEAFIKKFNEEMRLQRQESLNQY 317


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