BLASTX nr result

ID: Glycyrrhiza24_contig00023744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023744
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606061.1| 50S ribosomal protein L2-B [Medicago truncat...   164   7e-39
ref|XP_003599582.1| 50S ribosomal protein L2 [Medicago truncatul...   164   7e-39
ref|XP_003605908.1| 50S ribosomal protein L2 [Medicago truncatul...   162   3e-38
gb|ACH47392.1| ribosomal protein L23 [Erodium chrysanthum]            152   2e-35
gb|ADF28188.1| 50S ribosomal protein L2 (chloroplast) [Phoenix d...   138   5e-31

>ref|XP_003606061.1| 50S ribosomal protein L2-B [Medicago truncatula]
           gi|355507116|gb|AES88258.1| 50S ribosomal protein L2-B
           [Medicago truncatula]
          Length = 382

 Score =  164 bits (415), Expect = 7e-39
 Identities = 87/140 (62%), Positives = 92/140 (65%)
 Frame = -3

Query: 440 EIKQWVELFFGVKVIAMNSHRLPVKGRKVRPSKGHTMHYRRMIITLQPGYSIPPLRKKRT 261
           EIK WVELFFGVKVIAMNSHRLP+KGR++RP  GH  HY+RMIIT               
Sbjct: 70  EIKHWVELFFGVKVIAMNSHRLPIKGRRMRPIMGHRPHYKRMIIT--------------- 114

Query: 260 *IKILNSMAIHLYKTSTPSTRNGAVDSQVKSKSNPRNHLIYGQRRCGKGRNARGIITARH 81
                  MAIHLYKTS PSTR              RN LIYGQ  CGKGRNARGIITA H
Sbjct: 115 -------MAIHLYKTSIPSTRT-------------RNRLIYGQHHCGKGRNARGIITAGH 154

Query: 80  RGGGHKRLYRKIDFRRNRSE 21
           RGGGHKRLYRKIDFRRN  +
Sbjct: 155 RGGGHKRLYRKIDFRRNEKD 174


>ref|XP_003599582.1| 50S ribosomal protein L2 [Medicago truncatula]
           gi|355488630|gb|AES69833.1| 50S ribosomal protein L2
           [Medicago truncatula]
          Length = 236

 Score =  164 bits (415), Expect = 7e-39
 Identities = 87/140 (62%), Positives = 92/140 (65%)
 Frame = -3

Query: 440 EIKQWVELFFGVKVIAMNSHRLPVKGRKVRPSKGHTMHYRRMIITLQPGYSIPPLRKKRT 261
           EIK WVELFFGVKVIAMNSHRLP+KGR++RP  GH  HY+RMIIT               
Sbjct: 70  EIKHWVELFFGVKVIAMNSHRLPIKGRRMRPIMGHRPHYKRMIIT--------------- 114

Query: 260 *IKILNSMAIHLYKTSTPSTRNGAVDSQVKSKSNPRNHLIYGQRRCGKGRNARGIITARH 81
                  MAIHLYKTS PSTR              RN LIYGQ  CGKGRNARGIITA H
Sbjct: 115 -------MAIHLYKTSIPSTRT-------------RNRLIYGQHHCGKGRNARGIITAGH 154

Query: 80  RGGGHKRLYRKIDFRRNRSE 21
           RGGGHKRLYRKIDFRRN  +
Sbjct: 155 RGGGHKRLYRKIDFRRNEKD 174


>ref|XP_003605908.1| 50S ribosomal protein L2 [Medicago truncatula]
           gi|355506963|gb|AES88105.1| 50S ribosomal protein L2
           [Medicago truncatula]
          Length = 236

 Score =  162 bits (410), Expect = 3e-38
 Identities = 86/140 (61%), Positives = 91/140 (65%)
 Frame = -3

Query: 440 EIKQWVELFFGVKVIAMNSHRLPVKGRKVRPSKGHTMHYRRMIITLQPGYSIPPLRKKRT 261
           EIK WVELFFGVKVIAMNSHRLP+ GR++RP  GH  HY+RMIIT               
Sbjct: 70  EIKHWVELFFGVKVIAMNSHRLPINGRRMRPIMGHRPHYKRMIIT--------------- 114

Query: 260 *IKILNSMAIHLYKTSTPSTRNGAVDSQVKSKSNPRNHLIYGQRRCGKGRNARGIITARH 81
                  MAIHLYKTS PSTR              RN LIYGQ  CGKGRNARGIITA H
Sbjct: 115 -------MAIHLYKTSIPSTRT-------------RNRLIYGQHHCGKGRNARGIITAGH 154

Query: 80  RGGGHKRLYRKIDFRRNRSE 21
           RGGGHKRLYRKIDFRRN  +
Sbjct: 155 RGGGHKRLYRKIDFRRNEKD 174


>gb|ACH47392.1| ribosomal protein L23 [Erodium chrysanthum]
          Length = 250

 Score =  152 bits (385), Expect = 2e-35
 Identities = 89/147 (60%), Positives = 98/147 (66%), Gaps = 10/147 (6%)
 Frame = -3

Query: 440 EIKQWVELFFGVKVIAMNSHRLPVKGRKVRPSKGHTMHYRRMIITLQPGYSIPPL----- 276
           EIK WVEL FGVKVIAMNSHRLP  G +  P  G  M Y+RMIIT++ G S+P L     
Sbjct: 44  EIKYWVELLFGVKVIAMNSHRLP--GTRRTPL-GRRMEYKRMIITVKQGDSLPYLIIDDT 100

Query: 275 ----RKKRT*IKILNSMAIHLYKT-STPSTRNGAVDSQVKSKSNPRNHLIYGQRRCGKGR 111
                KK           I + K+ STP TR    DSQVKS  NPRNHLIYG+  CGKGR
Sbjct: 101 ENEMNKKELMASQRKDEGIEVNKSNSTPMTRTAVADSQVKS--NPRNHLIYGRHHCGKGR 158

Query: 110 NARGIITARHRGGGHKRLYRKIDFRRN 30
           NARGIITA HRGGGHKRLYR+IDFRRN
Sbjct: 159 NARGIITAGHRGGGHKRLYRQIDFRRN 185


>gb|ADF28188.1| 50S ribosomal protein L2 (chloroplast) [Phoenix dactylifera]
          Length = 277

 Score =  138 bits (347), Expect = 5e-31
 Identities = 67/77 (87%), Positives = 71/77 (92%)
 Frame = -3

Query: 251 ILNSMAIHLYKTSTPSTRNGAVDSQVKSKSNPRNHLIYGQRRCGKGRNARGIITARHRGG 72
           +LN+ AIHLYKTSTPSTRNGAVDSQVKS  NPRN+LIYGQ RCGKGRNARGIITARHRGG
Sbjct: 1   MLNNTAIHLYKTSTPSTRNGAVDSQVKS--NPRNNLIYGQHRCGKGRNARGIITARHRGG 58

Query: 71  GHKRLYRKIDFRRNRSE 21
           GHKRLYRKIDFRRN  +
Sbjct: 59  GHKRLYRKIDFRRNEKD 75


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