BLASTX nr result

ID: Glycyrrhiza24_contig00023735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023735
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616240.1| DEAD-box ATP-dependent RNA helicase [Medicag...   488   e-136
ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   405   e-111
ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...   405   e-111
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   394   e-107
ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arab...   375   e-102

>ref|XP_003616240.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355517575|gb|AES99198.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 497

 Score =  488 bits (1257), Expect = e-136
 Identities = 246/290 (84%), Positives = 261/290 (90%)
 Frame = +3

Query: 3   RDLALQVKRVFDAVASPLGLRVGLAVGQSSVADEISELVEVPAREAGTCYDPQRVSLPRF 182
           RDLALQVK+VFDAVASPLGLRVGLAVGQSS+ADEISELVE+PAR+ GTCYDP  +SLPRF
Sbjct: 111 RDLALQVKQVFDAVASPLGLRVGLAVGQSSLADEISELVEMPARDIGTCYDPHCISLPRF 170

Query: 183 QSKVDILVATPGRLMDHINTTKGFTLEHLYYLVVDETDRLLREAYQSWLPTVLELTQSND 362
           QSKVDILVATPGRLMDHINTT GFTLEHLYYLVVDETDRLLREAYQSWLPTVLEL QSND
Sbjct: 171 QSKVDILVATPGRLMDHINTTIGFTLEHLYYLVVDETDRLLREAYQSWLPTVLELIQSND 230

Query: 363 EGLFQPADSVFPCSLGALRTRRRCGVERGFKDKPYPRLAKMVLSATLTQDPGRXXXXXXX 542
           +G   P+ S FPCS  ALRTRRRCGVERGFKDKPYPRLAKMVLSATLTQDPGR       
Sbjct: 231 DGFSLPSASFFPCSASALRTRRRCGVERGFKDKPYPRLAKMVLSATLTQDPGRLIQLNLH 290

Query: 543 XXXXXKAGQMRYRLPENLESYKLICETKLKPLYLVALLKSLGGEKCIVFTKSVESTHQLC 722
                KAGQMRYRLPENLESYKLICE K+KPLYL+ALLKSLG EKC+VFTKSV+STH+LC
Sbjct: 291 HPLLLKAGQMRYRLPENLESYKLICEKKVKPLYLIALLKSLGEEKCLVFTKSVDSTHRLC 350

Query: 723 KLLNCFGDLQIDIKEYSGLQHQRVRSKTLNEFRKGEFQVLVSSDALTRGM 872
           +LLNCF DL+IDIKEYS LQHQRVRSKTLNEFRKG FQVL+SSDALTRGM
Sbjct: 351 QLLNCFEDLRIDIKEYSSLQHQRVRSKTLNEFRKGVFQVLLSSDALTRGM 400


>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
           gi|297740757|emb|CBI30939.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  405 bits (1041), Expect = e-111
 Identities = 206/290 (71%), Positives = 235/290 (81%)
 Frame = +3

Query: 3   RDLALQVKRVFDAVASPLGLRVGLAVGQSSVADEISELVEVPAREAGTCYDPQRVSLPRF 182
           RDLALQVK VF A+A  +GL VGLAVGQ+S+ADEISEL++ P  EAG CYDP+ +SL   
Sbjct: 112 RDLALQVKEVFAAIAPAVGLSVGLAVGQTSIADEISELIKRPKLEAGICYDPEDISL-EL 170

Query: 183 QSKVDILVATPGRLMDHINTTKGFTLEHLYYLVVDETDRLLREAYQSWLPTVLELTQSND 362
           QS VDILVATPGRLMDHINTTKGFTL+HL YLVVDETDRLLREAYQSWLPTVL+LT+S+D
Sbjct: 171 QSSVDILVATPGRLMDHINTTKGFTLKHLRYLVVDETDRLLREAYQSWLPTVLQLTRSSD 230

Query: 363 EGLFQPADSVFPCSLGALRTRRRCGVERGFKDKPYPRLAKMVLSATLTQDPGRXXXXXXX 542
           E LF    ++ P + G++ T RRCGVERGFK + YPRL K+VLSATLTQDP +       
Sbjct: 231 ESLFPCGKTILPSTFGSMNTIRRCGVERGFKGRSYPRLVKIVLSATLTQDPSKLALLDLH 290

Query: 543 XXXXXKAGQMRYRLPENLESYKLICETKLKPLYLVALLKSLGGEKCIVFTKSVESTHQLC 722
                 AGQ RY+LPE L+S+KLICE+KLKPLYLVALL+ LGGEKCIVFT SVES H+LC
Sbjct: 291 HPLLLTAGQRRYQLPEKLKSFKLICESKLKPLYLVALLRDLGGEKCIVFTSSVESAHRLC 350

Query: 723 KLLNCFGDLQIDIKEYSGLQHQRVRSKTLNEFRKGEFQVLVSSDALTRGM 872
            LLN FGDLQI I EYSGLQHQRVRSKTL EFR G+ QVL+SSD +TRGM
Sbjct: 351 TLLNFFGDLQIKIGEYSGLQHQRVRSKTLEEFRGGKIQVLISSDGMTRGM 400


>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  405 bits (1040), Expect = e-111
 Identities = 209/290 (72%), Positives = 233/290 (80%)
 Frame = +3

Query: 3   RDLALQVKRVFDAVASPLGLRVGLAVGQSSVADEISELVEVPAREAGTCYDPQRVSLPRF 182
           RDLALQVK+VF A+A  +GL VGLAVGQSS+ADEISEL++ P  EAG CYDPQ V L   
Sbjct: 115 RDLALQVKQVFAAIAPAMGLSVGLAVGQSSIADEISELIKKPEHEAGICYDPQDV-LQEL 173

Query: 183 QSKVDILVATPGRLMDHINTTKGFTLEHLYYLVVDETDRLLREAYQSWLPTVLELTQSND 362
           QS VDILVATPGRLMDHI TTKGFTLEHL YLVVDETDRLLRE+YQSWLPTVL+LT+  D
Sbjct: 174 QSSVDILVATPGRLMDHITTTKGFTLEHLCYLVVDETDRLLRESYQSWLPTVLKLTRPYD 233

Query: 363 EGLFQPADSVFPCSLGALRTRRRCGVERGFKDKPYPRLAKMVLSATLTQDPGRXXXXXXX 542
           E L    ++  PC+ G+L+T RRCGVERGFK K YPRLAKMVLSATLTQDP +       
Sbjct: 234 ESLVPGVNNFLPCASGSLKTIRRCGVERGFKGKSYPRLAKMVLSATLTQDPSKLAQLNLH 293

Query: 543 XXXXXKAGQMRYRLPENLESYKLICETKLKPLYLVALLKSLGGEKCIVFTKSVESTHQLC 722
                  GQ RY+LPE LESYKLIC +KLKPLYLVA+L+ LGGEKCIVFT SVESTH+LC
Sbjct: 294 HPLFLTTGQRRYQLPEKLESYKLICVSKLKPLYLVAVLQHLGGEKCIVFTSSVESTHRLC 353

Query: 723 KLLNCFGDLQIDIKEYSGLQHQRVRSKTLNEFRKGEFQVLVSSDALTRGM 872
            LLN FGDL++ IKEYSGLQ Q VRSKTL  FR+GE QVLVSSDA+TRGM
Sbjct: 354 TLLNFFGDLKVKIKEYSGLQRQSVRSKTLKAFREGEIQVLVSSDAMTRGM 403


>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus]
          Length = 517

 Score =  394 bits (1013), Expect = e-107
 Identities = 205/290 (70%), Positives = 230/290 (79%)
 Frame = +3

Query: 3   RDLALQVKRVFDAVASPLGLRVGLAVGQSSVADEISELVEVPAREAGTCYDPQRVSLPRF 182
           RDLALQVK VF A+A  +GL VGLAVGQSS+ADEISEL++ P  EAG CYDP    L   
Sbjct: 112 RDLALQVKEVFSAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPDDF-LVEL 170

Query: 183 QSKVDILVATPGRLMDHINTTKGFTLEHLYYLVVDETDRLLREAYQSWLPTVLELTQSND 362
           QS VDILVATPGRLMDHIN TKGFTL+HL YLV+DETDRLLREAYQSWLPTVL+LT ++D
Sbjct: 171 QSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLTHADD 230

Query: 363 EGLFQPADSVFPCSLGALRTRRRCGVERGFKDKPYPRLAKMVLSATLTQDPGRXXXXXXX 542
             +  P+    PCS G+L+T RR GVERGFK KPYPRLAKMVLSATLTQDPG+       
Sbjct: 231 SSIIFPSYISNPCSDGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLH 290

Query: 543 XXXXXKAGQMRYRLPENLESYKLICETKLKPLYLVALLKSLGGEKCIVFTKSVESTHQLC 722
                  G+ RY+LPE LESY +ICE+KLKPLYLVALL+SLG EKCIVFT SVESTH+LC
Sbjct: 291 HPLFLTTGKRRYKLPEKLESYMMICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLC 350

Query: 723 KLLNCFGDLQIDIKEYSGLQHQRVRSKTLNEFRKGEFQVLVSSDALTRGM 872
            LLN F DL++ IKEYSGLQ Q +RSKTLN FR GE QVLVSSDA+TRGM
Sbjct: 351 SLLNFFEDLELKIKEYSGLQRQSLRSKTLNAFRGGEIQVLVSSDAMTRGM 400


>ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp.
           lyrata] gi|297316041|gb|EFH46464.1| hypothetical protein
           ARALYDRAFT_493299 [Arabidopsis lyrata subsp. lyrata]
          Length = 522

 Score =  375 bits (963), Expect = e-102
 Identities = 196/290 (67%), Positives = 223/290 (76%)
 Frame = +3

Query: 3   RDLALQVKRVFDAVASPLGLRVGLAVGQSSVADEISELVEVPAREAGTCYDPQRVSLPRF 182
           RDLALQVK VFDA+A  +GL VG AVGQSS+A EIS+L++ P  +AG CYDP+ +S   F
Sbjct: 114 RDLALQVKDVFDAIAPTVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPEDLS-QNF 172

Query: 183 QSKVDILVATPGRLMDHINTTKGFTLEHLYYLVVDETDRLLREAYQSWLPTVLELTQSND 362
           +S VDILVATPGRLMDHIN TKGFTLEHL YLVVDETDRLLREAYQSWLPTVL+LTQ++D
Sbjct: 173 ESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSD 232

Query: 363 EGLFQPADSVFPCSLGALRTRRRCGVERGFKDKPYPRLAKMVLSATLTQDPGRXXXXXXX 542
           +GLF       P + G+LRT RR  VERGFK KPYPRL KMVLSATLTQDP +       
Sbjct: 233 DGLFPSCTPFVPSAFGSLRTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLH 292

Query: 543 XXXXXKAGQMRYRLPENLESYKLICETKLKPLYLVALLKSLGGEKCIVFTKSVESTHQLC 722
                  G  RYRLPE LE  +LICET +KP+YLVALLKS  GEKCI+FT SVE+T +LC
Sbjct: 293 HPLFMTTGGSRYRLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLC 352

Query: 723 KLLNCFGDLQIDIKEYSGLQHQRVRSKTLNEFRKGEFQVLVSSDALTRGM 872
           KLLN FGD +I  KEYSG  +Q VRSK L  FRKG+ QVLV+SDALTRGM
Sbjct: 353 KLLNFFGDPKIKAKEYSGGLNQSVRSKELKAFRKGDIQVLVASDALTRGM 402


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