BLASTX nr result

ID: Glycyrrhiza24_contig00023717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023717
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN09101.1| Ribonuclease H [Medicago truncatula]                    92   4e-17
gb|ABN09044.1| Ribonuclease H [Medicago truncatula]                    74   1e-11
ref|XP_003620113.1| Resistance protein PRG [Medicago truncatula]...    72   4e-11
gb|AFK48593.1| unknown [Lotus japonicus]                               71   1e-10
gb|ABD32401.2| Ribonuclease H [Medicago truncatula]                    70   2e-10

>gb|ABN09101.1| Ribonuclease H [Medicago truncatula]
          Length = 170

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/96 (47%), Positives = 61/96 (63%)
 Frame = -3

Query: 289 IAAELTAIATGLKLAWLVGYRNIVCESDSKTMLDLIKDCVDMFHPQATIIQNIHMAIAAQ 110
           +  EL AI  GL+LAW +G+R I  E D K+ LDLI D    +HP A ++  I   + ++
Sbjct: 54  LLVELYAILNGLQLAWDLGFRIITLEPDYKSALDLILDNDTTYHPHAIVLGRIR-TLMSR 112

Query: 109 DWSITFAHTLREGNSCADWLAKTGATLEINLITWSS 2
           DWS+ F HTLREGN CADWLAK  A  +++L  W S
Sbjct: 113 DWSLLFNHTLREGNECADWLAKYDAQSDVSLKLWVS 148


>gb|ABN09044.1| Ribonuclease H [Medicago truncatula]
          Length = 235

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 34/89 (38%), Positives = 58/89 (65%)
 Frame = -3

Query: 280 ELTAIATGLKLAWLVGYRNIVCESDSKTMLDLIKDCVDMFHPQATIIQNIHMAIAAQDWS 101
           E++ +  GLKL W +G +++VC SDS T++DL++  +++ H    +I  I   +  +DW 
Sbjct: 123 EISGLYHGLKLCWDIGIKHVVCHSDSTTVVDLVQKDLNVHHKYGNLIMAI-KKLLRRDWV 181

Query: 100 ITFAHTLREGNSCADWLAKTGATLEINLI 14
           ++  HTL EGN+ AD+LAK GA  + +L+
Sbjct: 182 VSLRHTLCEGNAAADFLAKKGALSDTSLV 210


>ref|XP_003620113.1| Resistance protein PRG [Medicago truncatula]
            gi|355495128|gb|AES76331.1| Resistance protein PRG
            [Medicago truncatula]
          Length = 1256

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/84 (46%), Positives = 53/84 (63%)
 Frame = -3

Query: 283  AELTAIATGLKLAWLVGYRNIVCESDSKTMLDLIKDCVDMFHPQATIIQNIHMAIAAQDW 104
            AELTAI  GL LA  +G   + C SDS+  + LI   +  FH  A +IQ+I   +A+ ++
Sbjct: 1144 AELTAIFHGLTLAASMGIEELACFSDSQIAISLITAAIPRFHAYAVLIQDIKEILASNNF 1203

Query: 103  SITFAHTLREGNSCADWLAKTGAT 32
              T  HTLREGN CAD++AK GA+
Sbjct: 1204 --TILHTLREGNHCADFMAKLGAS 1225


>gb|AFK48593.1| unknown [Lotus japonicus]
          Length = 272

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/89 (40%), Positives = 52/89 (58%)
 Frame = -3

Query: 280 ELTAIATGLKLAWLVGYRNIVCESDSKTMLDLIKDCVDMFHPQATIIQNIHMAIAAQDWS 101
           EL  +  GL LAW  GYR + C+SDS+  + L+K      H  A ++ +I   + ++DW 
Sbjct: 160 ELLGMFHGLSLAWEQGYRIVECQSDSQDAVTLVKSTPSSCHRYAALVWDIK-DLQSRDWI 218

Query: 100 ITFAHTLREGNSCADWLAKTGATLEINLI 14
           +   HTLREGN+CAD L K GA    +L+
Sbjct: 219 VELRHTLREGNACADLLVKHGADQNDDLV 247


>gb|ABD32401.2| Ribonuclease H [Medicago truncatula]
          Length = 233

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 41/96 (42%), Positives = 55/96 (57%)
 Frame = -3

Query: 289 IAAELTAIATGLKLAWLVGYRNIVCESDSKTMLDLIKDCVDMFHPQATIIQNIHMAIAAQ 110
           + AELTAI  GLKL   +    I+C SDS   ++LI +    +H  A +IQNI   +   
Sbjct: 119 LLAELTAIHQGLKLVTDLNVNEIMCYSDSLLAVNLIANDTPRYHIYAALIQNIKDLL--N 176

Query: 109 DWSITFAHTLREGNSCADWLAKTGATLEINLITWSS 2
           D +I+  HTLREGN CAD+ AK GA  +  L+   S
Sbjct: 177 DRNISLHHTLREGNQCADFFAKFGANSDAALVVHQS 212


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