BLASTX nr result

ID: Glycyrrhiza24_contig00023696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00023696
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553481.1| PREDICTED: E3 ubiquitin protein ligase DRIP2...   271   5e-71
ref|XP_003520583.1| PREDICTED: E3 ubiquitin protein ligase DRIP2...   268   3e-70
ref|XP_002275598.1| PREDICTED: E3 ubiquitin protein ligase DRIP2...   233   9e-60
ref|XP_002520991.1| ring finger protein, putative [Ricinus commu...   230   8e-59
ref|XP_002306821.1| predicted protein [Populus trichocarpa] gi|2...   219   1e-55

>ref|XP_003553481.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
          Length = 428

 Score =  271 bits (692), Expect = 5e-71
 Identities = 135/154 (87%), Positives = 140/154 (90%)
 Frame = -2

Query: 463 MPNQVVRVSRDTIAACMTCPLCNKLFREATTISECLHTFCRKCIYDKITDEELECCPICN 284
           M NQVV+V RDTIAACMTCPLC KLFREATTISECLHTFCRKCIYDKITDEE+ECCPICN
Sbjct: 1   MSNQVVKVRRDTIAACMTCPLCGKLFREATTISECLHTFCRKCIYDKITDEEIECCPICN 60

Query: 283 IDLGCVPLEKLRPDHSLQDVRSKVFPLKGRKVEAPEPEVVTSVPLPARRKERSLSSLVVN 104
           IDLGCVPLEKLRPDHSLQDVR+KVFPLKGRKV+A  PEVVTSVPLPARRKERSLSSLVV+
Sbjct: 61  IDLGCVPLEKLRPDHSLQDVRAKVFPLKGRKVKA--PEVVTSVPLPARRKERSLSSLVVS 118

Query: 103 TPRVSAQATMTGRRTKPTRKAXXXXXXXXSIEKP 2
           TPRVS QATMTGRRTKPTRKA        SIEKP
Sbjct: 119 TPRVSTQATMTGRRTKPTRKASGLRSTSFSIEKP 152


>ref|XP_003520583.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
          Length = 445

 Score =  268 bits (685), Expect = 3e-70
 Identities = 133/155 (85%), Positives = 140/155 (90%)
 Frame = -2

Query: 466 TMPNQVVRVSRDTIAACMTCPLCNKLFREATTISECLHTFCRKCIYDKITDEELECCPIC 287
           +M NQVV+V R+TI ACMTCPLCNKLFREATTISECLHTFCRKCIYDKITDEE+ECCPIC
Sbjct: 16  SMSNQVVKVRRNTIVACMTCPLCNKLFREATTISECLHTFCRKCIYDKITDEEIECCPIC 75

Query: 286 NIDLGCVPLEKLRPDHSLQDVRSKVFPLKGRKVEAPEPEVVTSVPLPARRKERSLSSLVV 107
           NIDLGCVPLEKLRPDHSLQDVR+KVFPLKGRKV+A  PEVVTSVPLPARRKERSLSSLVV
Sbjct: 76  NIDLGCVPLEKLRPDHSLQDVRAKVFPLKGRKVKA--PEVVTSVPLPARRKERSLSSLVV 133

Query: 106 NTPRVSAQATMTGRRTKPTRKAXXXXXXXXSIEKP 2
           +TPRVS QA MTGRRTKPTRKA        SIEKP
Sbjct: 134 STPRVSTQAAMTGRRTKPTRKASGLRSTSFSIEKP 168


>ref|XP_002275598.1| PREDICTED: E3 ubiquitin protein ligase DRIP2 [Vitis vinifera]
           gi|297735508|emb|CBI17948.3| unnamed protein product
           [Vitis vinifera]
          Length = 430

 Score =  233 bits (595), Expect = 9e-60
 Identities = 118/154 (76%), Positives = 129/154 (83%), Gaps = 1/154 (0%)
 Frame = -2

Query: 463 MPNQVVRVSRDTIAACMTCPLCNKLFREATTISECLHTFCRKCIYDKITDEELECCPICN 284
           M NQVV+V R+TIAACMTCPLCNKL R+ATTISECLHTFCRKCIY+KI+DEELECCPICN
Sbjct: 1   MSNQVVKVRRETIAACMTCPLCNKLLRDATTISECLHTFCRKCIYNKISDEELECCPICN 60

Query: 283 IDLGCVPLEKLRPDHSLQDVRSKVFPLKGRKVEAPEPEVVTSVPLPARRKERSLSSLVVN 104
            DLGCVPLEKLRPDH+LQDVR+K+FP K RKV+A  PEVV  V LP +RKERSLSSLVV+
Sbjct: 61  TDLGCVPLEKLRPDHNLQDVRAKIFPFKRRKVKA--PEVVLPVTLPVKRKERSLSSLVVS 118

Query: 103 TPRVSAQATMTGRRTKP-TRKAXXXXXXXXSIEK 5
           TPRVS Q TMTGRRTK   RKA        SIEK
Sbjct: 119 TPRVSTQTTMTGRRTKSVARKATALRGSGFSIEK 152


>ref|XP_002520991.1| ring finger protein, putative [Ricinus communis]
           gi|223539828|gb|EEF41408.1| ring finger protein,
           putative [Ricinus communis]
          Length = 520

 Score =  230 bits (587), Expect = 8e-59
 Identities = 115/154 (74%), Positives = 127/154 (82%), Gaps = 1/154 (0%)
 Frame = -2

Query: 463 MPNQVVRVSRDTIAACMTCPLCNKLFREATTISECLHTFCRKCIYDKITDEELECCPICN 284
           M NQVV+V RDTIAACMTCPLC+ L ++ATTISECLHTFCRKCIY KI+DE +ECCPICN
Sbjct: 1   MANQVVKVKRDTIAACMTCPLCDMLLKDATTISECLHTFCRKCIYKKISDEGVECCPICN 60

Query: 283 IDLGCVPLEKLRPDHSLQDVRSKVFPLKGRKVEAPEPEVVTSVPLPARRKERSLSSLVVN 104
           IDLGCVPLEKLRPDH+LQDVR+K+FP K RKVEA  PEV +SV LP RRKERSLSSLVVN
Sbjct: 61  IDLGCVPLEKLRPDHNLQDVRAKIFPFKRRKVEA--PEVTSSVILPVRRKERSLSSLVVN 118

Query: 103 TPRVSAQATMTGRRTKPT-RKAXXXXXXXXSIEK 5
            P+VSAQ T TGRRT+P  RKA         IEK
Sbjct: 119 APKVSAQTTTTGRRTRPVLRKATALRISNFPIEK 152


>ref|XP_002306821.1| predicted protein [Populus trichocarpa] gi|222856270|gb|EEE93817.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score =  219 bits (559), Expect = 1e-55
 Identities = 113/154 (73%), Positives = 127/154 (82%), Gaps = 2/154 (1%)
 Frame = -2

Query: 457 NQVVRVSRDTIAACMTCPLCNKLFREATTISECLHTFCRKCIYDKITDEELECCPICNID 278
           ++VV+V R+TI ACMTCPLCNKL R+ATTISECLHTFCRKCIY +I+DE L+ CPICNI+
Sbjct: 8   HRVVKVRRETIEACMTCPLCNKLLRDATTISECLHTFCRKCIYQRISDEGLDSCPICNIN 67

Query: 277 LGCVPLEKLRPDHSLQDVRSKVFPLKGRKVEAPEPEVVTSVPLPA-RRKERSLSSLVVNT 101
           LGC+PLEKLRPDH+LQDVRSK+FP K RKVEA  PEVV SV LP  RRKERSLSSLVV+T
Sbjct: 68  LGCIPLEKLRPDHNLQDVRSKIFPYKRRKVEA--PEVVESVTLPVIRRKERSLSSLVVST 125

Query: 100 PRVSAQATMTGRRTKP-TRKAXXXXXXXXSIEKP 2
           P+VS Q T TGRRTKP  RKA        SIEKP
Sbjct: 126 PKVSTQTTTTGRRTKPFPRKAAALRGSGFSIEKP 159


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